RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 LST1O00453 97 aa4.23□□□□□ -1.73
RFC1-207ENST00000504554 SNCGO76070 127 aa4.23□□□□□ -1.73
RFC1-207ENST00000504554 TEN1Q86WV5 123 aa4.23□□□□□ -1.73
RFC1-207ENST00000504554 IGKV2D-30A0A075B6S6 120 aa4.22□□□□□ -1.73
RFC1-207ENST00000504554 KRTAP10-7P60409 375 aaPredicted RBP4.22□□□□□ -1.73
RFC1-207ENST00000504554 MT1HP80294 61 aa4.21□□□□□ -1.74
RFC1-207ENST00000504554 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
RFC1-207ENST00000504554 ORMDL1Q9P0S3 153 aa4.21□□□□□ -1.74
RFC1-207ENST00000504554 DNAL4O96015 105 aa4.2□□□□□ -1.74
RFC1-207ENST00000504554 NAA38Q9BRA0 125 aaKnown RBP4.2□□□□□ -1.74
RFC1-207ENST00000504554 COX6CP09669 75 aa4.19□□□□□ -1.74
RFC1-207ENST00000504554 KRTAP5-11Q6L8G4 156 aa4.19□□□□□ -1.74
RFC1-207ENST00000504554 ANKRD29Q8N6D5 301 aa4.19□□□□□ -1.74
RFC1-207ENST00000504554 SS18L2Q9UHA2 77 aa4.19□□□□□ -1.74
RFC1-207ENST00000504554 TMEM256-PLSCR3K7ERE1 68 aa4.18□□□□□ -1.74
RFC1-207ENST00000504554 TRACP01848 142 aa4.18□□□□□ -1.74
RFC1-207ENST00000504554 SCGB1C2P0DMR2 95 aa4.18□□□□□ -1.74
RFC1-207ENST00000504554 DSCR10P59022 87 aa4.18□□□□□ -1.74
RFC1-207ENST00000504554 TRBV7-4A0A0J9YYF1 115 aa4.17□□□□□ -1.74
RFC1-207ENST00000504554 KRTAP10-6P60371 365 aaPredicted RBP4.17□□□□□ -1.74
RFC1-207ENST00000504554 DEFB116Q30KQ4 102 aa4.17□□□□□ -1.74
RFC1-207ENST00000504554 NOTCH2NLQ7Z3S9 236 aa4.17□□□□□ -1.74
RFC1-207ENST00000504554 C20orf166-AS1Q96NR2 134 aa4.17□□□□□ -1.74
RFC1-207ENST00000504554 KRTAP2-2Q9BYT5 123 aa4.17□□□□□ -1.74
RFC1-207ENST00000504554 A8MUU9 505 aa4.16□□□□□ -1.74
RFC1-207ENST00000504554 H3BQ85 93 aa4.16□□□□□ -1.74
RFC1-207ENST00000504554 CCKP06307 115 aa4.16□□□□□ -1.74
RFC1-207ENST00000504554 SMIM6P0DI80 62 aa4.16□□□□□ -1.74
RFC1-207ENST00000504554 LINC00472Q9H8W2 130 aa4.16□□□□□ -1.74
RFC1-207ENST00000504554 LOC105371267A0A1B0GV96 52 aa4.15□□□□□ -1.75
RFC1-207ENST00000504554 KRTAP16-1A8MUX0 517 aa4.15□□□□□ -1.75
RFC1-207ENST00000504554 BAALC-AS2P0C853 105 aa4.15□□□□□ -1.75
RFC1-207ENST00000504554 IGKV4-1P06312 121 aa4.14□□□□□ -1.75
RFC1-207ENST00000504554 ATP11AUNQ6ZP68 121 aa4.14□□□□□ -1.75
RFC1-207ENST00000504554 SIGMAR1Q99720 223 aa4.14□□□□□ -1.75
RFC1-207ENST00000504554 M0R143 59 aa4.13□□□□□ -1.75
RFC1-207ENST00000504554 RBM3P98179 157 aaKnown RBP4.13□□□□□ -1.75
RFC1-207ENST00000504554 VPS25Q9BRG1 176 aa4.12□□□□□ -1.75
RFC1-207ENST00000504554 LINC00313P59037 77 aa4.11□□□□□ -1.75
RFC1-207ENST00000504554 ATXN8Q156A1 80 aa4.11□□□□□ -1.75
RFC1-207ENST00000504554 BATFQ16520 125 aa4.1□□□□□ -1.75
RFC1-207ENST00000504554 MTURNQ8N3F0 131 aa4.1□□□□□ -1.75
RFC1-207ENST00000504554 DSCR8Q96T75 97 aa4.1□□□□□ -1.75
RFC1-207ENST00000504554 FSIP2Q5CZC0 6907 aa4.1□□□□□ -1.75
RFC1-207ENST00000504554 IGHV6-1A0A0B4J1U7 121 aa4.09□□□□□ -1.75
RFC1-207ENST00000504554 C9JAW5 83 aa4.09□□□□□ -1.75
RFC1-207ENST00000504554 COX6B2Q6YFQ2 88 aa4.09□□□□□ -1.75
RFC1-207ENST00000504554 Q6ZQT0 140 aa4.09□□□□□ -1.75
RFC1-207ENST00000504554 TSTD3H0UI37 97 aa4.08□□□□□ -1.76
RFC1-207ENST00000504554 TAX1BP3O14907 124 aa4.08□□□□□ -1.76
RFC1-207ENST00000504554 LOC110117498A0A087WWA1 95 aa4.07□□□□□ -1.76
RFC1-207ENST00000504554 A0A1B0GVX0 72 aa4.07□□□□□ -1.76
RFC1-207ENST00000504554 C14orf132Q9NPU4 83 aa4.07□□□□□ -1.76
RFC1-207ENST00000504554 M0R2T5 61 aa4.06□□□□□ -1.76
RFC1-207ENST00000504554 OCR1Q9BZK8 76 aa4.06□□□□□ -1.76
RFC1-207ENST00000504554 JMJD7-PLA2G4BH0Y9G9 81 aa4.05□□□□□ -1.76
RFC1-207ENST00000504554 USH2AO75445 5202 aa4.04□□□□□ -1.76
RFC1-207ENST00000504554 TRBV20-1A0A075B6N2 111 aa4.04□□□□□ -1.76
RFC1-207ENST00000504554 A0A1W2PPM0 123 aa4.04□□□□□ -1.76
RFC1-207ENST00000504554 C8orf87E5RJ46 101 aa4.04□□□□□ -1.76
RFC1-207ENST00000504554 HRES1P13985 223 aa4.04□□□□□ -1.76
RFC1-207ENST00000504554 IGKV3D-7A0A0C4DH55 119 aa4.03□□□□□ -1.76
RFC1-207ENST00000504554 J3KT08 172 aa4.02□□□□□ -1.77
RFC1-207ENST00000504554 LYRM7Q5U5X0 104 aa4.02□□□□□ -1.77
RFC1-207ENST00000504554 SSPOA2VEC9 5147 aa4.02□□□□□ -1.77
RFC1-207ENST00000504554 A8MWP4 228 aa4.01□□□□□ -1.77
RFC1-207ENST00000504554 C8orf17Q9NRJ1 99 aa4.01□□□□□ -1.77
RFC1-207ENST00000504554 A0A1B0GW54 56 aa4□□□□□ -1.77
RFC1-207ENST00000504554 H3BT86 120 aa4□□□□□ -1.77
RFC1-207ENST00000504554 PDE6GP18545 87 aa4□□□□□ -1.77
RFC1-207ENST00000504554 ZCCHC13Q8WW36 166 aaKnown RBP4□□□□□ -1.77
RFC1-207ENST00000504554 CRCT1Q9UGL9 99 aa3.99□□□□□ -1.77
RFC1-207ENST00000504554 MMP24-AS1A0A0U1RRL7 71 aa3.98□□□□□ -1.77
RFC1-207ENST00000504554 NREPQ16612 68 aa3.98□□□□□ -1.77
RFC1-207ENST00000504554 PRR15Q8IV56 129 aa3.98□□□□□ -1.77
RFC1-207ENST00000504554 NDUFB1O75438 58 aa3.97□□□□□ -1.77
RFC1-207ENST00000504554 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
RFC1-207ENST00000504554 SPCS1Q9Y6A9 102 aa3.97□□□□□ -1.77
RFC1-207ENST00000504554 K7EQZ3 153 aa3.96□□□□□ -1.78
RFC1-207ENST00000504554 SPINK7P58062 85 aa3.96□□□□□ -1.78
RFC1-207ENST00000504554 PRO0461Q9UI25 63 aa3.96□□□□□ -1.78
RFC1-207ENST00000504554 FAM236DA0A1B0GTK5 79 aa3.95□□□□□ -1.78
RFC1-207ENST00000504554 FAM236CP0DP71 79 aa3.95□□□□□ -1.78
RFC1-207ENST00000504554 MT2AP02795 61 aa3.94□□□□□ -1.78
RFC1-207ENST00000504554 RBM12B-AS1Q9P1G2 102 aa3.94□□□□□ -1.78
RFC1-207ENST00000504554 COL5A1-AS1Q5SY13 56 aa3.93□□□□□ -1.78
RFC1-207ENST00000504554 Q8N9L7 120 aa3.93□□□□□ -1.78
RFC1-207ENST00000504554 TMEM254Q8TBM7 123 aa3.93□□□□□ -1.78
RFC1-207ENST00000504554 MRPL34Q9BQ48 92 aaKnown RBP3.93□□□□□ -1.78
RFC1-207ENST00000504554 K7EP34 96 aa3.92□□□□□ -1.78
RFC1-207ENST00000504554 MT1FP04733 61 aa3.92□□□□□ -1.78
RFC1-207ENST00000504554 hDV103S1A0JD37 113 aa3.91□□□□□ -1.78
RFC1-207ENST00000504554 BPY2O14599 106 aa3.91□□□□□ -1.78
RFC1-207ENST00000504554 Q5W150 140 aa3.9□□□□□ -1.79
RFC1-207ENST00000504554 WFDC13Q8IUB5 93 aa3.9□□□□□ -1.79
RFC1-207ENST00000504554 LINC00846Q9NV44 126 aa3.9□□□□□ -1.79
RFC1-207ENST00000504554 NDUFS5O43920 106 aa3.87□□□□□ -1.79
RFC1-207ENST00000504554 FCGBPQ9Y6R7 5405 aaPredicted RBP3.86□□□□□ -1.79
RFC1-207ENST00000504554 MT3P25713 68 aa3.86□□□□□ -1.79
RFC1-207ENST00000504554 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms