RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 Q96NJ1 140 aa8.37□□□□□ -1.07
DDR1-250ENST00000503628 Q6ZQT0 140 aa8.36□□□□□ -1.07
DDR1-250ENST00000503628 SSPOA2VEC9 5147 aa8.35□□□□□ -1.07
DDR1-250ENST00000503628 PDE6GP18545 87 aa8.35□□□□□ -1.07
DDR1-250ENST00000503628 C14orf132Q9NPU4 83 aa8.35□□□□□ -1.07
DDR1-250ENST00000503628 USH2AO75445 5202 aa8.34□□□□□ -1.07
DDR1-250ENST00000503628 K7EP34 96 aa8.34□□□□□ -1.07
DDR1-250ENST00000503628 C21orf62-AS1Q17RA5 79 aa8.34□□□□□ -1.07
DDR1-250ENST00000503628 RPL37P61927 97 aaKnown RBP8.32□□□□□ -1.08
DDR1-250ENST00000503628 A0A1B0GW54 56 aa8.3□□□□□ -1.08
DDR1-250ENST00000503628 SIGMAR1Q99720 223 aa8.3□□□□□ -1.08
DDR1-250ENST00000503628 LINC00472Q9H8W2 130 aa8.3□□□□□ -1.08
DDR1-250ENST00000503628 IGKV4-1P06312 121 aa8.29□□□□□ -1.08
DDR1-250ENST00000503628 SMCPP49901 116 aaPredicted RBP8.29□□□□□ -1.08
DDR1-250ENST00000503628 GTF2H5Q6ZYL4 71 aa8.28□□□□□ -1.08
DDR1-250ENST00000503628 PRO0461Q9UI25 63 aa8.28□□□□□ -1.08
DDR1-250ENST00000503628 FCGBPQ9Y6R7 5405 aaPredicted RBP8.28□□□□□ -1.08
DDR1-250ENST00000503628 DEFB116Q30KQ4 102 aa8.27□□□□□ -1.09
DDR1-250ENST00000503628 KRTAP9-8Q9BYQ0 159 aa8.24□□□□□ -1.09
DDR1-250ENST00000503628 J3KT08 172 aa8.21□□□□□ -1.1
DDR1-250ENST00000503628 DSCR10P59022 87 aa8.21□□□□□ -1.1
DDR1-250ENST00000503628 F8W1H4 67 aa8.19□□□□□ -1.1
DDR1-250ENST00000503628 IGHV6-1A0A0B4J1U7 121 aa8.18□□□□□ -1.1
DDR1-250ENST00000503628 LINC00313P59037 77 aa8.18□□□□□ -1.1
DDR1-250ENST00000503628 NREPQ16612 68 aa8.18□□□□□ -1.1
DDR1-250ENST00000503628 Q75L30 129 aa8.18□□□□□ -1.1
DDR1-250ENST00000503628 A0A1B0GVX0 72 aa8.17□□□□□ -1.1
DDR1-250ENST00000503628 KRTAP19-1Q8IUB9 90 aa8.16□□□□□ -1.1
DDR1-250ENST00000503628 C20orf166-AS1Q96NR2 134 aa8.16□□□□□ -1.1
DDR1-250ENST00000503628 NOTCH2NLQ7Z3S9 236 aa8.15□□□□□ -1.1
DDR1-250ENST00000503628 C8orf87E5RJ46 101 aa8.14□□□□□ -1.11
DDR1-250ENST00000503628 A8MUU9 505 aa8.13□□□□□ -1.11
DDR1-250ENST00000503628 KRTAP16-1A8MUX0 517 aa8.13□□□□□ -1.11
DDR1-250ENST00000503628 NDUFB1O75438 58 aa8.13□□□□□ -1.11
DDR1-250ENST00000503628 A8MWP4 228 aa8.12□□□□□ -1.11
DDR1-250ENST00000503628 MACF1Q9UPN3 7388 aaKnown RBP8.11□□□□□ -1.11
DDR1-250ENST00000503628 ETDBQ3ZM63 59 aa8.11□□□□□ -1.11
DDR1-250ENST00000503628 ATP11AUNQ6ZP68 121 aa8.11□□□□□ -1.11
DDR1-250ENST00000503628 SYNE2Q8WXH0 6885 aaKnown RBP8.1□□□□□ -1.11
DDR1-250ENST00000503628 IGKV3D-7A0A0C4DH55 119 aa8.09□□□□□ -1.11
DDR1-250ENST00000503628 LCE2BO14633 110 aa8.08□□□□□ -1.12
DDR1-250ENST00000503628 Q6ZVQ6 151 aa8.08□□□□□ -1.12
DDR1-250ENST00000503628 BPY2O14599 106 aa8.06□□□□□ -1.12
DDR1-250ENST00000503628 PRR15Q8IV56 129 aa8.06□□□□□ -1.12
DDR1-250ENST00000503628 LINC00846Q9NV44 126 aa8.06□□□□□ -1.12
DDR1-250ENST00000503628 MT2AP02795 61 aa8.05□□□□□ -1.12
DDR1-250ENST00000503628 C8orf17Q9NRJ1 99 aa8.05□□□□□ -1.12
DDR1-250ENST00000503628 A0A1B0GV90 55 aa8.04□□□□□ -1.12
DDR1-250ENST00000503628 UBL5Q9BZL1 73 aa8.04□□□□□ -1.12
DDR1-250ENST00000503628 K7EQZ3 153 aa8.02□□□□□ -1.13
DDR1-250ENST00000503628 MMP24-AS1A0A0U1RRL7 71 aa7.99□□□□□ -1.13
DDR1-250ENST00000503628 MT1FP04733 61 aa7.99□□□□□ -1.13
DDR1-250ENST00000503628 KRTAP9-3Q9BYQ3 159 aa7.99□□□□□ -1.13
DDR1-250ENST00000503628 Q8N9P0 234 aaPredicted RBP7.98□□□□□ -1.13
DDR1-250ENST00000503628 Q8N9L7 120 aa7.95□□□□□ -1.14
DDR1-250ENST00000503628 TMEM254Q8TBM7 123 aa7.95□□□□□ -1.14
DDR1-250ENST00000503628 hDV103S1A0JD37 113 aa7.94□□□□□ -1.14
DDR1-250ENST00000503628 KRTAP10-10P60014 251 aa7.94□□□□□ -1.14
DDR1-250ENST00000503628 ZCCHC13Q8WW36 166 aaKnown RBP7.93□□□□□ -1.14
DDR1-250ENST00000503628 MRPL34Q9BQ48 92 aaKnown RBP7.93□□□□□ -1.14
DDR1-250ENST00000503628 ACYP1P07311 99 aa7.92□□□□□ -1.14
DDR1-250ENST00000503628 FAM240AA0A1B0GVK7 77 aa7.91□□□□□ -1.14
DDR1-250ENST00000503628 CXCL6P80162 114 aa7.89□□□□□ -1.15
DDR1-250ENST00000503628 CASC2Q6XLA1 102 aa7.88□□□□□ -1.15
DDR1-250ENST00000503628 WFDC13Q8IUB5 93 aa7.88□□□□□ -1.15
DDR1-250ENST00000503628 NDUFS5O43920 106 aa7.86□□□□□ -1.15
DDR1-250ENST00000503628 KRTAP19-6Q3LI70 58 aa7.86□□□□□ -1.15
DDR1-250ENST00000503628 FAM236DA0A1B0GTK5 79 aa7.84□□□□□ -1.15
DDR1-250ENST00000503628 HCG22E2RYF7 251 aa7.84□□□□□ -1.15
DDR1-250ENST00000503628 FAM236CP0DP71 79 aa7.84□□□□□ -1.15
DDR1-250ENST00000503628 KRTAP6-3Q3LI67 103 aa7.83□□□□□ -1.16
DDR1-250ENST00000503628 ATP5EP2Q5VTU8 51 aa7.8□□□□□ -1.16
DDR1-250ENST00000503628 HRES1P13985 223 aa7.79□□□□□ -1.16
DDR1-250ENST00000503628 SPINK7P58062 85 aa7.79□□□□□ -1.16
DDR1-250ENST00000503628 MPLKIPQ8TAP9 179 aa7.76□□□□□ -1.17
DDR1-250ENST00000503628 J3QR89 54 aa7.75□□□□□ -1.17
DDR1-250ENST00000503628 Q5W150 140 aa7.75□□□□□ -1.17
DDR1-250ENST00000503628 RBM12B-AS1Q9P1G2 102 aa7.75□□□□□ -1.17
DDR1-250ENST00000503628 LINC00643Q86TS7 51 aa7.74□□□□□ -1.17
DDR1-250ENST00000503628 HIST1H4AP62805 103 aaKnown RBP7.7□□□□□ -1.18
DDR1-250ENST00000503628 TP53AIP1Q9HCN2 124 aa7.68□□□□□ -1.18
DDR1-250ENST00000503628 IGKV2D-30A0A075B6S6 120 aa7.67□□□□□ -1.18
DDR1-250ENST00000503628 IGKV2-30P06310 120 aa7.67□□□□□ -1.18
DDR1-250ENST00000503628 C7orf65Q6ZTY9 151 aa7.67□□□□□ -1.18
DDR1-250ENST00000503628 NEBP20929 6669 aa7.64□□□□□ -1.19
DDR1-250ENST00000503628 A0A087WVE0 104 aa7.62□□□□□ -1.19
DDR1-250ENST00000503628 K7ERU9 68 aa7.58□□□□□ -1.2
DDR1-250ENST00000503628 TRAV22A0A0B4J277 110 aa7.55□□□□□ -1.2
DDR1-250ENST00000503628 UQCRQO14949 82 aa7.54□□□□□ -1.2
DDR1-250ENST00000503628 C4orf26Q17RF5 130 aa7.51□□□□□ -1.21
DDR1-250ENST00000503628 KRTAP20-1Q3LI63 56 aa7.51□□□□□ -1.21
DDR1-250ENST00000503628 MUC12Q9UKN1 5478 aa7.5□□□□□ -1.21
DDR1-250ENST00000503628 H1FX-AS1Q4G0G2 97 aa7.49□□□□□ -1.21
DDR1-250ENST00000503628 LOC101927531A0A1B0GV80 90 aa7.47□□□□□ -1.21
DDR1-250ENST00000503628 H0Y9P7 68 aa7.47□□□□□ -1.21
DDR1-250ENST00000503628 ATOX1O00244 68 aa7.47□□□□□ -1.21
DDR1-250ENST00000503628 CYP4F30PQ9H0H9 118 aa7.47□□□□□ -1.21
DDR1-250ENST00000503628 MT-ATP8P03928 68 aa7.46□□□□□ -1.22
DDR1-250ENST00000503628 OCR1Q9BZK8 76 aa7.46□□□□□ -1.22
DDR1-250ENST00000503628 IMUPQ9GZP8 106 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms