RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 H3BT86 120 aa5.88□□□□□ -1.47
UBE2D3-212ENST00000502563 OBSCN-AS1Q96MR7 158 aa5.88□□□□□ -1.47
UBE2D3-212ENST00000502563 RNF213Q63HN8 5207 aa5.88□□□□□ -1.47
UBE2D3-212ENST00000502563 LOC110117498A0A087WWA1 95 aa5.87□□□□□ -1.47
UBE2D3-212ENST00000502563 CCKP06307 115 aa5.87□□□□□ -1.47
UBE2D3-212ENST00000502563 SEC61BP60468 96 aaKnown RBP5.87□□□□□ -1.47
UBE2D3-212ENST00000502563 MUC17Q685J3 4493 aa5.86□□□□□ -1.47
UBE2D3-212ENST00000502563 C9JAW5 83 aa5.86□□□□□ -1.47
UBE2D3-212ENST00000502563 Q96NJ1 140 aa5.86□□□□□ -1.47
UBE2D3-212ENST00000502563 MUC2Q02817 5179 aa5.85□□□□□ -1.47
UBE2D3-212ENST00000502563 Q6ZQT0 140 aa5.83□□□□□ -1.48
UBE2D3-212ENST00000502563 LINC00472Q9H8W2 130 aa5.83□□□□□ -1.48
UBE2D3-212ENST00000502563 A0A0U1RQV1 116 aa5.81□□□□□ -1.48
UBE2D3-212ENST00000502563 SPCS1Q9Y6A9 102 aa5.81□□□□□ -1.48
UBE2D3-212ENST00000502563 C9orf92A6NGG3 77 aa5.8□□□□□ -1.48
UBE2D3-212ENST00000502563 RPL37P61927 97 aaKnown RBP5.8□□□□□ -1.48
UBE2D3-212ENST00000502563 J3KT08 172 aa5.79□□□□□ -1.48
UBE2D3-212ENST00000502563 Q75L30 129 aa5.79□□□□□ -1.48
UBE2D3-212ENST00000502563 A0A1B0GV72 72 aa5.78□□□□□ -1.48
UBE2D3-212ENST00000502563 K7EP34 96 aa5.78□□□□□ -1.48
UBE2D3-212ENST00000502563 C14orf132Q9NPU4 83 aa5.77□□□□□ -1.49
UBE2D3-212ENST00000502563 IGKV4-1P06312 121 aa5.76□□□□□ -1.49
UBE2D3-212ENST00000502563 C20orf166-AS1Q96NR2 134 aa5.76□□□□□ -1.49
UBE2D3-212ENST00000502563 VPS25Q9BRG1 176 aa5.76□□□□□ -1.49
UBE2D3-212ENST00000502563 GTF2H5Q6ZYL4 71 aa5.75□□□□□ -1.49
UBE2D3-212ENST00000502563 PRO0461Q9UI25 63 aa5.75□□□□□ -1.49
UBE2D3-212ENST00000502563 A8MUU9 505 aa5.74□□□□□ -1.49
UBE2D3-212ENST00000502563 SIGMAR1Q99720 223 aa5.74□□□□□ -1.49
UBE2D3-212ENST00000502563 KRTAP9-8Q9BYQ0 159 aa5.74□□□□□ -1.49
UBE2D3-212ENST00000502563 C8orf87E5RJ46 101 aa5.73□□□□□ -1.49
UBE2D3-212ENST00000502563 F8W1H4 67 aa5.72□□□□□ -1.49
UBE2D3-212ENST00000502563 LINC00313P59037 77 aa5.72□□□□□ -1.49
UBE2D3-212ENST00000502563 PCOTHQ58A44 107 aa5.72□□□□□ -1.49
UBE2D3-212ENST00000502563 A0A1B0GVX0 72 aa5.71□□□□□ -1.5
UBE2D3-212ENST00000502563 MTURNQ8N3F0 131 aa5.71□□□□□ -1.5
UBE2D3-212ENST00000502563 KRTAP4-1Q9BYQ7 146 aa5.71□□□□□ -1.5
UBE2D3-212ENST00000502563 KRTAP16-1A8MUX0 517 aa5.7□□□□□ -1.5
UBE2D3-212ENST00000502563 A8MWP4 228 aa5.69□□□□□ -1.5
UBE2D3-212ENST00000502563 NDUFB1O75438 58 aa5.69□□□□□ -1.5
UBE2D3-212ENST00000502563 NREPQ16612 68 aa5.69□□□□□ -1.5
UBE2D3-212ENST00000502563 ATP11AUNQ6ZP68 121 aa5.69□□□□□ -1.5
UBE2D3-212ENST00000502563 DSCR10P59022 87 aa5.67□□□□□ -1.5
UBE2D3-212ENST00000502563 DEFB116Q30KQ4 102 aa5.67□□□□□ -1.5
UBE2D3-212ENST00000502563 IGHV6-1A0A0B4J1U7 121 aa5.66□□□□□ -1.5
UBE2D3-212ENST00000502563 PRR15Q8IV56 129 aa5.65□□□□□ -1.5
UBE2D3-212ENST00000502563 NOTCH2NLQ7Z3S9 236 aa5.64□□□□□ -1.51
UBE2D3-212ENST00000502563 IGKV3D-7A0A0C4DH55 119 aa5.63□□□□□ -1.51
UBE2D3-212ENST00000502563 Q8N9P0 234 aaPredicted RBP5.63□□□□□ -1.51
UBE2D3-212ENST00000502563 H3BS24 57 aa5.62□□□□□ -1.51
UBE2D3-212ENST00000502563 KRTAP19-2Q3LHN2 52 aa5.62□□□□□ -1.51
UBE2D3-212ENST00000502563 FAT4Q6V0I7 4981 aa5.62□□□□□ -1.51
UBE2D3-212ENST00000502563 Q6ZVQ6 151 aa5.61□□□□□ -1.51
UBE2D3-212ENST00000502563 C8orf17Q9NRJ1 99 aa5.61□□□□□ -1.51
UBE2D3-212ENST00000502563 BPY2O14599 106 aa5.6□□□□□ -1.51
UBE2D3-212ENST00000502563 ETDBQ3ZM63 59 aa5.6□□□□□ -1.51
UBE2D3-212ENST00000502563 UBL5Q9BZL1 73 aa5.6□□□□□ -1.51
UBE2D3-212ENST00000502563 A0A1B0GV90 55 aa5.58□□□□□ -1.52
UBE2D3-212ENST00000502563 LINC00846Q9NV44 126 aa5.58□□□□□ -1.52
UBE2D3-212ENST00000502563 MMP24-AS1A0A0U1RRL7 71 aa5.57□□□□□ -1.52
UBE2D3-212ENST00000502563 FAM240AA0A1B0GVK7 77 aa5.57□□□□□ -1.52
UBE2D3-212ENST00000502563 K7EQZ3 153 aa5.57□□□□□ -1.52
UBE2D3-212ENST00000502563 TMEM254Q8TBM7 123 aa5.57□□□□□ -1.52
UBE2D3-212ENST00000502563 ACYP1P07311 99 aa5.56□□□□□ -1.52
UBE2D3-212ENST00000502563 ZCCHC13Q8WW36 166 aaKnown RBP5.55□□□□□ -1.52
UBE2D3-212ENST00000502563 MRPL34Q9BQ48 92 aaKnown RBP5.55□□□□□ -1.52
UBE2D3-212ENST00000502563 hDV103S1A0JD37 113 aa5.54□□□□□ -1.52
UBE2D3-212ENST00000502563 CXCL6P80162 114 aa5.54□□□□□ -1.52
UBE2D3-212ENST00000502563 MPLKIPQ8TAP9 179 aa5.51□□□□□ -1.53
UBE2D3-212ENST00000502563 MT1HP80294 61 aa5.49□□□□□ -1.53
UBE2D3-212ENST00000502563 ATP5EP2Q5VTU8 51 aa5.48□□□□□ -1.53
UBE2D3-212ENST00000502563 CASC2Q6XLA1 102 aa5.48□□□□□ -1.53
UBE2D3-212ENST00000502563 COX6B2Q6YFQ2 88 aa5.47□□□□□ -1.53
UBE2D3-212ENST00000502563 HCG22E2RYF7 251 aa5.46□□□□□ -1.54
UBE2D3-212ENST00000502563 HRES1P13985 223 aa5.46□□□□□ -1.54
UBE2D3-212ENST00000502563 Q8N9L7 120 aa5.46□□□□□ -1.54
UBE2D3-212ENST00000502563 SPINK7P58062 85 aa5.45□□□□□ -1.54
UBE2D3-212ENST00000502563 RBM12B-AS1Q9P1G2 102 aa5.44□□□□□ -1.54
UBE2D3-212ENST00000502563 FLGP20930 4061 aaPredicted RBP5.44□□□□□ -1.54
UBE2D3-212ENST00000502563 WFDC13Q8IUB5 93 aa5.43□□□□□ -1.54
UBE2D3-212ENST00000502563 NDUFS5O43920 106 aa5.41□□□□□ -1.54
UBE2D3-212ENST00000502563 TP53AIP1Q9HCN2 124 aa5.41□□□□□ -1.54
UBE2D3-212ENST00000502563 J3QR89 54 aa5.4□□□□□ -1.54
UBE2D3-212ENST00000502563 LINC00643Q86TS7 51 aa5.4□□□□□ -1.54
UBE2D3-212ENST00000502563 Q5W150 140 aa5.38□□□□□ -1.55
UBE2D3-212ENST00000502563 C7orf65Q6ZTY9 151 aa5.38□□□□□ -1.55
UBE2D3-212ENST00000502563 KRTAP10-6P60371 365 aaPredicted RBP5.36□□□□□ -1.55
UBE2D3-212ENST00000502563 FAM236DA0A1B0GTK5 79 aa5.35□□□□□ -1.55
UBE2D3-212ENST00000502563 FAM236CP0DP71 79 aa5.35□□□□□ -1.55
UBE2D3-212ENST00000502563 M0R2T5 61 aa5.34□□□□□ -1.55
UBE2D3-212ENST00000502563 K7ERU9 68 aa5.31□□□□□ -1.56
UBE2D3-212ENST00000502563 IGKV2-30P06310 120 aa5.31□□□□□ -1.56
UBE2D3-212ENST00000502563 IGKV2D-30A0A075B6S6 120 aa5.29□□□□□ -1.56
UBE2D3-212ENST00000502563 HIST1H4AP62805 103 aaKnown RBP5.29□□□□□ -1.56
UBE2D3-212ENST00000502563 TRAV22A0A0B4J277 110 aa5.28□□□□□ -1.56
UBE2D3-212ENST00000502563 UQCRQO14949 82 aa5.27□□□□□ -1.57
UBE2D3-212ENST00000502563 H1FX-AS1Q4G0G2 97 aa5.26□□□□□ -1.57
UBE2D3-212ENST00000502563 ATOX1O00244 68 aa5.25□□□□□ -1.57
UBE2D3-212ENST00000502563 IMUPQ9GZP8 106 aa5.25□□□□□ -1.57
UBE2D3-212ENST00000502563 LOC101927531A0A1B0GV80 90 aa5.24□□□□□ -1.57
UBE2D3-212ENST00000502563 A0A087WVE0 104 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms