RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 DNAH2Q9P225 4427 aa1.85□□□□□ -2.11
SUB1-202ENST00000502453 A0A096LNT2 108 aa1.84□□□□□ -2.11
SUB1-202ENST00000502453 PRB3Q04118 309 aaPredicted RBP1.84□□□□□ -2.11
SUB1-202ENST00000502453 HUWE1Q7Z6Z7 4374 aaKnown RBP1.84□□□□□ -2.11
SUB1-202ENST00000502453 PTPN13Q12923 2485 aa1.84□□□□□ -2.12
SUB1-202ENST00000502453 VWFP04275 2813 aa1.84□□□□□ -2.12
SUB1-202ENST00000502453 DNAH6Q9C0G6 4158 aa1.84□□□□□ -2.12
SUB1-202ENST00000502453 RIF1Q5UIP0 2472 aaKnown RBP1.84□□□□□ -2.12
SUB1-202ENST00000502453 KMT2AQ03164 3969 aa1.83□□□□□ -2.12
SUB1-202ENST00000502453 APELAP0DMC3 54 aa1.83□□□□□ -2.12
SUB1-202ENST00000502453 PKD1P98161 4303 aa1.83□□□□□ -2.12
SUB1-202ENST00000502453 EP300Q09472 2414 aaPredicted RBP1.83□□□□□ -2.12
SUB1-202ENST00000502453 LCE3CQ5T5A8 94 aa1.83□□□□□ -2.12
SUB1-202ENST00000502453 VPS13DQ5THJ4 4388 aa1.83□□□□□ -2.12
SUB1-202ENST00000502453 HTN1P15515 57 aa1.83□□□□□ -2.12
SUB1-202ENST00000502453 PLAC4Q8WY50 150 aa1.83□□□□□ -2.12
SUB1-202ENST00000502453 HECTD1Q9ULT8 2610 aa1.83□□□□□ -2.12
SUB1-202ENST00000502453 GVQW2A0A096LPI5 108 aaPredicted RBP1.82□□□□□ -2.12
SUB1-202ENST00000502453 USP9YO00507 2555 aaPredicted RBP1.82□□□□□ -2.12
SUB1-202ENST00000502453 CRIPTQ9P021 101 aa1.82□□□□□ -2.12
SUB1-202ENST00000502453 PKHD1P08F94 4074 aa1.82□□□□□ -2.12
SUB1-202ENST00000502453 URB1O60287 2271 aaKnown RBP1.82□□□□□ -2.12
SUB1-202ENST00000502453 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
SUB1-202ENST00000502453 ANGP03950 147 aaKnown RBP1.81□□□□□ -2.12
SUB1-202ENST00000502453 SPINK13Q1W4C9 94 aa1.81□□□□□ -2.12
SUB1-202ENST00000502453 SORL1Q92673 2214 aa1.81□□□□□ -2.12
SUB1-202ENST00000502453 ABCA12Q86UK0 2595 aa1.81□□□□□ -2.12
SUB1-202ENST00000502453 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
SUB1-202ENST00000502453 NSD1Q96L73 2696 aaPredicted RBP1.8□□□□□ -2.12
SUB1-202ENST00000502453 PLECQ15149 4684 aaKnown RBP1.8□□□□□ -2.12
SUB1-202ENST00000502453 U3KQA8 63 aa1.8□□□□□ -2.12
SUB1-202ENST00000502453 KNL1Q8NG31 2342 aa1.8□□□□□ -2.12
SUB1-202ENST00000502453 TEP1Q99973 2627 aaKnown RBP1.8□□□□□ -2.12
SUB1-202ENST00000502453 KRTAP10-6P60371 365 aaPredicted RBP1.8□□□□□ -2.12
SUB1-202ENST00000502453 DEFB109BQ30KR1 87 aa1.8□□□□□ -2.12
SUB1-202ENST00000502453 PRO0255Q9UI72 69 aa1.8□□□□□ -2.12
SUB1-202ENST00000502453 DNAH11Q96DT5 4516 aa1.79□□□□□ -2.12
SUB1-202ENST00000502453 PTPRQQ9UMZ3 2332 aa1.79□□□□□ -2.12
SUB1-202ENST00000502453 KRTAP1-5Q9BYS1 174 aa1.79□□□□□ -2.12
SUB1-202ENST00000502453 NAV3Q8IVL0 2385 aa1.79□□□□□ -2.12
SUB1-202ENST00000502453 JMJD1CQ15652 2540 aa1.79□□□□□ -2.12
SUB1-202ENST00000502453 IGLV5-48A0A075B6I7 105 aa1.79□□□□□ -2.12
SUB1-202ENST00000502453 TGP01266 2768 aa1.79□□□□□ -2.12
SUB1-202ENST00000502453 WFDC10BQ8IUB3 73 aa1.78□□□□□ -2.12
SUB1-202ENST00000502453 C6orf48Q9UBA6 75 aa1.78□□□□□ -2.12
SUB1-202ENST00000502453 FASNP49327 2511 aaKnown RBP1.78□□□□□ -2.12
SUB1-202ENST00000502453 ABCA2Q9BZC7 2435 aa1.78□□□□□ -2.12
SUB1-202ENST00000502453 KRTAP12-2P59991 146 aa1.78□□□□□ -2.12
SUB1-202ENST00000502453 WFDC13Q8IUB5 93 aa1.78□□□□□ -2.12
SUB1-202ENST00000502453 KRTAP13-4Q3LI77 160 aa1.78□□□□□ -2.12
SUB1-202ENST00000502453 C10orf99Q6UWK7 81 aa1.78□□□□□ -2.12
SUB1-202ENST00000502453 UBE2DNLQ8IWF7 75 aa1.78□□□□□ -2.12
SUB1-202ENST00000502453 WNK2Q9Y3S1 2297 aa1.78□□□□□ -2.13
SUB1-202ENST00000502453 HERC2O95714 4834 aa1.77□□□□□ -2.13
SUB1-202ENST00000502453 SPTBN2O15020 2390 aa1.77□□□□□ -2.13
SUB1-202ENST00000502453 LYNX1G3V0Z9 82 aa1.77□□□□□ -2.13
SUB1-202ENST00000502453 H0YAA0 97 aa1.77□□□□□ -2.13
SUB1-202ENST00000502453 DEFB105AQ8NG35 78 aa1.77□□□□□ -2.13
SUB1-202ENST00000502453 ITPR3Q14573 2671 aa1.77□□□□□ -2.13
SUB1-202ENST00000502453 TLN1Q9Y490 2541 aaKnown RBP1.77□□□□□ -2.13
SUB1-202ENST00000502453 A8MTW9 85 aa1.77□□□□□ -2.13
SUB1-202ENST00000502453 COX6A2Q02221 97 aa1.77□□□□□ -2.13
SUB1-202ENST00000502453 UNQ6190/PRO20217Q6UXQ8 127 aa1.77□□□□□ -2.13
SUB1-202ENST00000502453 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.77□□□□□ -2.132e-6■□□□□ 10.1
SUB1-202ENST00000502453 DEFB119Q8N690 84 aa1.76□□□□□ -2.13
SUB1-202ENST00000502453 FLNBO75369 2602 aaKnown RBP1.76□□□□□ -2.13
SUB1-202ENST00000502453 NBEAL1Q6ZS30 2694 aa1.76□□□□□ -2.13
SUB1-202ENST00000502453 DNAH10Q8IVF4 4471 aa1.76□□□□□ -2.13
SUB1-202ENST00000502453 K7EQZ3 153 aa1.76□□□□□ -2.13
SUB1-202ENST00000502453 LELP1Q5T871 98 aa1.76□□□□□ -2.13
SUB1-202ENST00000502453 KIAA1109Q2LD37 5005 aa1.75□□□□□ -2.13
SUB1-202ENST00000502453 DOPEY2Q9Y3R5 2298 aa1.75□□□□□ -2.13
SUB1-202ENST00000502453 APC2O95996 2303 aa1.75□□□□□ -2.13
SUB1-202ENST00000502453 RP1L1Q8IWN7 2480 aaPredicted RBP1.75□□□□□ -2.13
SUB1-202ENST00000502453 VPS13BQ7Z7G8 4022 aa1.75□□□□□ -2.13
SUB1-202ENST00000502453 DNAH17Q9UFH2 4485 aa1.75□□□□□ -2.13
SUB1-202ENST00000502453 CNOT1A5YKK6 2376 aaKnown RBP1.75□□□□□ -2.13
SUB1-202ENST00000502453 COX6B2Q6YFQ2 88 aa1.74□□□□□ -2.13
SUB1-202ENST00000502453 NOP10Q9NPE3 64 aaKnown RBP1.74□□□□□ -2.13
SUB1-202ENST00000502453 SPART-AS1P0CW21 52 aa1.74□□□□□ -2.13
SUB1-202ENST00000502453 NAV2Q8IVL1 2488 aa1.74□□□□□ -2.13
SUB1-202ENST00000502453 ABCA13Q86UQ4 5058 aa1.74□□□□□ -2.13
SUB1-202ENST00000502453 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
SUB1-202ENST00000502453 PKHD1L1Q86WI1 4243 aa1.74□□□□□ -2.13
SUB1-202ENST00000502453 COL6A6A6NMZ7 2263 aa1.74□□□□□ -2.13
SUB1-202ENST00000502453 LRRK2Q5S007 2527 aa1.74□□□□□ -2.13
SUB1-202ENST00000502453 KRTAP10-1P60331 282 aa1.74□□□□□ -2.13
SUB1-202ENST00000502453 RYR1P21817 5038 aa1.73□□□□□ -2.13
SUB1-202ENST00000502453 HIVEP3Q5T1R4 2406 aa1.73□□□□□ -2.13
SUB1-202ENST00000502453 KRTAP10-12P60413 245 aa1.73□□□□□ -2.13
SUB1-202ENST00000502453 PCOTHQ58A44 107 aa1.73□□□□□ -2.13
SUB1-202ENST00000502453 MRPL34Q9BQ48 92 aaKnown RBP1.73□□□□□ -2.13
SUB1-202ENST00000502453 DOPEY1Q5JWR5 2465 aa1.73□□□□□ -2.13
SUB1-202ENST00000502453 SETD2Q9BYW2 2564 aaPredicted RBP1.73□□□□□ -2.13
SUB1-202ENST00000502453 TPRP12270 2363 aaKnown RBP1.73□□□□□ -2.13
SUB1-202ENST00000502453 RPL37P61927 97 aaKnown RBP1.73□□□□□ -2.13
SUB1-202ENST00000502453 H3BNG1 76 aa1.72□□□□□ -2.13
SUB1-202ENST00000502453 KRTAP10-3P60369 221 aa1.72□□□□□ -2.13
SUB1-202ENST00000502453 KRTAP1-1Q07627 177 aa1.72□□□□□ -2.13
SUB1-202ENST00000502453 PLCE1Q9P212 2302 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms