RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 Q96NJ1 140 aa3.95□□□□□ -1.78
USP46-203ENST00000502443 LINC00846Q9NV44 126 aa3.95□□□□□ -1.78
USP46-203ENST00000502443 MUC2Q02817 5179 aa3.95□□□□□ -1.78
USP46-203ENST00000502443 PCOTHQ58A44 107 aa3.94□□□□□ -1.78
USP46-203ENST00000502443 SIGMAR1Q99720 223 aa3.94□□□□□ -1.78
USP46-203ENST00000502443 MT-ATP8P03928 68 aa3.93□□□□□ -1.78
USP46-203ENST00000502443 IGKV4-1P06312 121 aa3.93□□□□□ -1.78
USP46-203ENST00000502443 RPL37P61927 97 aaKnown RBP3.93□□□□□ -1.78
USP46-203ENST00000502443 DEFB116Q30KQ4 102 aa3.93□□□□□ -1.78
USP46-203ENST00000502443 KRTAP4-1Q9BYQ7 146 aa3.93□□□□□ -1.78
USP46-203ENST00000502443 MUC17Q685J3 4493 aa3.93□□□□□ -1.78
USP46-203ENST00000502443 C21orf62-AS1Q17RA5 79 aa3.92□□□□□ -1.78
USP46-203ENST00000502443 LINC00643Q86TS7 51 aa3.92□□□□□ -1.78
USP46-203ENST00000502443 LINC00472Q9H8W2 130 aa3.91□□□□□ -1.78
USP46-203ENST00000502443 DSCR10P59022 87 aa3.9□□□□□ -1.79
USP46-203ENST00000502443 Q75L30 129 aa3.9□□□□□ -1.79
USP46-203ENST00000502443 A0A1B0GW54 56 aa3.89□□□□□ -1.79
USP46-203ENST00000502443 LINC00313P59037 77 aa3.89□□□□□ -1.79
USP46-203ENST00000502443 ATP11AUNQ6ZP68 121 aa3.89□□□□□ -1.79
USP46-203ENST00000502443 IGHV6-1A0A0B4J1U7 121 aa3.88□□□□□ -1.79
USP46-203ENST00000502443 IGKV3D-7A0A0C4DH55 119 aa3.88□□□□□ -1.79
USP46-203ENST00000502443 Q6ZVQ6 151 aa3.88□□□□□ -1.79
USP46-203ENST00000502443 UBL5Q9BZL1 73 aa3.88□□□□□ -1.79
USP46-203ENST00000502443 J3KT08 172 aa3.87□□□□□ -1.79
USP46-203ENST00000502443 C20orf166-AS1Q96NR2 134 aa3.87□□□□□ -1.79
USP46-203ENST00000502443 A0A1B0GVX0 72 aa3.86□□□□□ -1.79
USP46-203ENST00000502443 A8MUU9 505 aa3.86□□□□□ -1.79
USP46-203ENST00000502443 NOTCH2NLQ7Z3S9 236 aa3.86□□□□□ -1.79
USP46-203ENST00000502443 NDUFB1O75438 58 aa3.85□□□□□ -1.79
USP46-203ENST00000502443 NREPQ16612 68 aa3.85□□□□□ -1.79
USP46-203ENST00000502443 ATP5EP2Q5VTU8 51 aa3.85□□□□□ -1.79
USP46-203ENST00000502443 IMUPQ9GZP8 106 aa3.85□□□□□ -1.79
USP46-203ENST00000502443 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.79
USP46-203ENST00000502443 KRTAP16-1A8MUX0 517 aa3.84□□□□□ -1.79
USP46-203ENST00000502443 C8orf87E5RJ46 101 aa3.84□□□□□ -1.79
USP46-203ENST00000502443 KRTAP4-6Q9BYQ5 205 aa3.84□□□□□ -1.79
USP46-203ENST00000502443 A8MWP4 228 aa3.83□□□□□ -1.8
USP46-203ENST00000502443 SCGB1A1P11684 91 aa3.83□□□□□ -1.8
USP46-203ENST00000502443 CXCL6P80162 114 aa3.83□□□□□ -1.8
USP46-203ENST00000502443 FAT4Q6V0I7 4981 aa3.82□□□□□ -1.8
USP46-203ENST00000502443 A0A087WVE0 104 aa3.81□□□□□ -1.8
USP46-203ENST00000502443 BPY2O14599 106 aa3.81□□□□□ -1.8
USP46-203ENST00000502443 KRTAP19-2Q3LHN2 52 aa3.81□□□□□ -1.8
USP46-203ENST00000502443 HIST1H4AP62805 103 aaKnown RBP3.8□□□□□ -1.8
USP46-203ENST00000502443 PRR15Q8IV56 129 aa3.8□□□□□ -1.8
USP46-203ENST00000502443 Q8N9L7 120 aa3.8□□□□□ -1.8
USP46-203ENST00000502443 C8orf17Q9NRJ1 99 aa3.8□□□□□ -1.8
USP46-203ENST00000502443 COX6B2Q6YFQ2 88 aa3.79□□□□□ -1.8
USP46-203ENST00000502443 FAM236AA0A1B0GUQ0 79 aa3.78□□□□□ -1.8
USP46-203ENST00000502443 FAM236BA0A1B0GV22 79 aa3.78□□□□□ -1.8
USP46-203ENST00000502443 K7EQZ3 153 aa3.77□□□□□ -1.81
USP46-203ENST00000502443 Q8N9P0 234 aaPredicted RBP3.77□□□□□ -1.81
USP46-203ENST00000502443 PCP4P48539 62 aa3.76□□□□□ -1.81
USP46-203ENST00000502443 MT1HP80294 61 aa3.76□□□□□ -1.81
USP46-203ENST00000502443 ZCCHC13Q8WW36 166 aaKnown RBP3.76□□□□□ -1.81
USP46-203ENST00000502443 MMP24-AS1A0A0U1RRL7 71 aa3.75□□□□□ -1.81
USP46-203ENST00000502443 hDV103S1A0JD37 113 aa3.75□□□□□ -1.81
USP46-203ENST00000502443 TMEM254Q8TBM7 123 aa3.74□□□□□ -1.81
USP46-203ENST00000502443 MRPL34Q9BQ48 92 aaKnown RBP3.74□□□□□ -1.81
USP46-203ENST00000502443 M0R2T5 61 aa3.73□□□□□ -1.81
USP46-203ENST00000502443 NDUFS5O43920 106 aa3.73□□□□□ -1.81
USP46-203ENST00000502443 ANAPC13Q9BS18 74 aa3.73□□□□□ -1.81
USP46-203ENST00000502443 ATOX1O00244 68 aa3.72□□□□□ -1.81
USP46-203ENST00000502443 CASC2Q6XLA1 102 aa3.72□□□□□ -1.81
USP46-203ENST00000502443 WFDC13Q8IUB5 93 aa3.72□□□□□ -1.81
USP46-203ENST00000502443 FAM236DA0A1B0GTK5 79 aa3.71□□□□□ -1.82
USP46-203ENST00000502443 HCG22E2RYF7 251 aa3.71□□□□□ -1.82
USP46-203ENST00000502443 FAM236CP0DP71 79 aa3.71□□□□□ -1.82
USP46-203ENST00000502443 SPINK7P58062 85 aa3.71□□□□□ -1.82
USP46-203ENST00000502443 RBM12B-AS1Q9P1G2 102 aa3.71□□□□□ -1.82
USP46-203ENST00000502443 HRES1P13985 223 aa3.7□□□□□ -1.82
USP46-203ENST00000502443 OCR1Q9BZK8 76 aa3.7□□□□□ -1.82
USP46-203ENST00000502443 TRAV7A0A075B6U4 112 aa3.69□□□□□ -1.82
USP46-203ENST00000502443 SERP2Q8N6R1 65 aa3.69□□□□□ -1.82
USP46-203ENST00000502443 CCDC179H3BU77 68 aa3.68□□□□□ -1.82
USP46-203ENST00000502443 SMIM20Q8N5G0 67 aa3.68□□□□□ -1.82
USP46-203ENST00000502443 MPLKIPQ8TAP9 179 aa3.68□□□□□ -1.82
USP46-203ENST00000502443 COX7CP15954 63 aa3.67□□□□□ -1.82
USP46-203ENST00000502443 KRTAP10-6P60371 365 aaPredicted RBP3.67□□□□□ -1.82
USP46-203ENST00000502443 KRTAP9-2Q9BYQ4 174 aa3.67□□□□□ -1.82
USP46-203ENST00000502443 FLGP20930 4061 aaPredicted RBP3.67□□□□□ -1.82
USP46-203ENST00000502443 Q5W150 140 aa3.66□□□□□ -1.82
USP46-203ENST00000502443 UQCRQO14949 82 aa3.65□□□□□ -1.83
USP46-203ENST00000502443 IGKV2D-30A0A075B6S6 120 aa3.64□□□□□ -1.83
USP46-203ENST00000502443 IGKV2-30P06310 120 aa3.64□□□□□ -1.83
USP46-203ENST00000502443 C7orf65Q6ZTY9 151 aa3.63□□□□□ -1.83
USP46-203ENST00000502443 C20orf197Q8N268 126 aa3.62□□□□□ -1.83
USP46-203ENST00000502443 CYSTM1Q9H1C7 97 aa3.62□□□□□ -1.83
USP46-203ENST00000502443 TP53AIP1Q9HCN2 124 aa3.61□□□□□ -1.83
USP46-203ENST00000502443 C5orf47Q569G3 176 aa3.6□□□□□ -1.83
USP46-203ENST00000502443 SNURFQ9Y675 71 aa3.6□□□□□ -1.83
USP46-203ENST00000502443 KLKP1Q107X0 134 aa3.59□□□□□ -1.83
USP46-203ENST00000502443 H0Y9P7 68 aa3.58□□□□□ -1.84
USP46-203ENST00000502443 C4orf26Q17RF5 130 aa3.57□□□□□ -1.84
USP46-203ENST00000502443 KRTAP9-8Q9BYQ0 159 aa3.57□□□□□ -1.84
USP46-203ENST00000502443 TRAV22A0A0B4J277 110 aa3.56□□□□□ -1.84
USP46-203ENST00000502443 H7BZZ5 65 aa3.56□□□□□ -1.84
USP46-203ENST00000502443 MP68P56378 58 aa3.56□□□□□ -1.84
USP46-203ENST00000502443 H1FX-AS1Q4G0G2 97 aa3.56□□□□□ -1.84
USP46-203ENST00000502443 LINC00208Q96KT6 92 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms