RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 SIGMAR1Q99720 223 aa6.25□□□□□ -1.41
THBS3-209ENST00000498500 BAALC-AS2P0C853 105 aa6.24□□□□□ -1.41
THBS3-209ENST00000498500 PCP4P48539 62 aa6.24□□□□□ -1.41
THBS3-209ENST00000498500 MTURNQ8N3F0 131 aa6.24□□□□□ -1.41
THBS3-209ENST00000498500 FCGBPQ9Y6R7 5405 aaPredicted RBP6.23□□□□□ -1.41
THBS3-209ENST00000498500 A8MUU9 505 aa6.23□□□□□ -1.41
THBS3-209ENST00000498500 DSCR10P59022 87 aa6.23□□□□□ -1.41
THBS3-209ENST00000498500 ATXN8Q156A1 80 aa6.23□□□□□ -1.41
THBS3-209ENST00000498500 KRTAP9-8Q9BYQ0 159 aa6.23□□□□□ -1.41
THBS3-209ENST00000498500 LINC00472Q9H8W2 130 aa6.23□□□□□ -1.41
THBS3-209ENST00000498500 K7ERU9 68 aa6.22□□□□□ -1.41
THBS3-209ENST00000498500 RBM3P98179 157 aaKnown RBP6.22□□□□□ -1.41
THBS3-209ENST00000498500 KRTAP16-1A8MUX0 517 aa6.21□□□□□ -1.42
THBS3-209ENST00000498500 IGKV4-1P06312 121 aa6.21□□□□□ -1.42
THBS3-209ENST00000498500 GTF2H5Q6ZYL4 71 aa6.21□□□□□ -1.42
THBS3-209ENST00000498500 ATP11AUNQ6ZP68 121 aa6.2□□□□□ -1.42
THBS3-209ENST00000498500 DSCR8Q96T75 97 aa6.2□□□□□ -1.42
THBS3-209ENST00000498500 VPS25Q9BRG1 176 aa6.2□□□□□ -1.42
THBS3-209ENST00000498500 DEFB116Q30KQ4 102 aa6.19□□□□□ -1.42
THBS3-209ENST00000498500 NOTCH2NLQ7Z3S9 236 aa6.19□□□□□ -1.42
THBS3-209ENST00000498500 KRTAP19-1Q8IUB9 90 aa6.19□□□□□ -1.42
THBS3-209ENST00000498500 Q6ZQT0 140 aa6.18□□□□□ -1.42
THBS3-209ENST00000498500 SPCS1Q9Y6A9 102 aa6.18□□□□□ -1.42
THBS3-209ENST00000498500 C9JAW5 83 aa6.17□□□□□ -1.42
THBS3-209ENST00000498500 LYRM7Q5U5X0 104 aa6.17□□□□□ -1.42
THBS3-209ENST00000498500 PRO0461Q9UI25 63 aa6.17□□□□□ -1.42
THBS3-209ENST00000498500 LOC110117498A0A087WWA1 95 aa6.16□□□□□ -1.42
THBS3-209ENST00000498500 K7EP34 96 aa6.16□□□□□ -1.42
THBS3-209ENST00000498500 TRBV20-1A0A075B6N2 111 aa6.15□□□□□ -1.42
THBS3-209ENST00000498500 LINC00313P59037 77 aa6.15□□□□□ -1.42
THBS3-209ENST00000498500 JMJD7-PLA2G4BH0Y9G9 81 aa6.14□□□□□ -1.43
THBS3-209ENST00000498500 SCGB1A1P11684 91 aa6.14□□□□□ -1.43
THBS3-209ENST00000498500 IGHV6-1A0A0B4J1U7 121 aa6.13□□□□□ -1.43
THBS3-209ENST00000498500 A0A1B0GVX0 72 aa6.13□□□□□ -1.43
THBS3-209ENST00000498500 C14orf132Q9NPU4 83 aa6.13□□□□□ -1.43
THBS3-209ENST00000498500 C21orf62-AS1Q17RA5 79 aa6.12□□□□□ -1.43
THBS3-209ENST00000498500 C8orf87E5RJ46 101 aa6.1□□□□□ -1.43
THBS3-209ENST00000498500 F8W1H4 67 aa6.1□□□□□ -1.43
THBS3-209ENST00000498500 J3QR89 54 aa6.1□□□□□ -1.43
THBS3-209ENST00000498500 MT2AP02795 61 aa6.1□□□□□ -1.43
THBS3-209ENST00000498500 SYNE2Q8WXH0 6885 aaKnown RBP6.09□□□□□ -1.43
THBS3-209ENST00000498500 A0A1B0GW54 56 aa6.09□□□□□ -1.43
THBS3-209ENST00000498500 H3BT86 120 aa6.09□□□□□ -1.43
THBS3-209ENST00000498500 J3KT08 172 aa6.09□□□□□ -1.43
THBS3-209ENST00000498500 PDE6GP18545 87 aa6.09□□□□□ -1.43
THBS3-209ENST00000498500 MACF1Q9UPN3 7388 aaKnown RBP6.09□□□□□ -1.44
THBS3-209ENST00000498500 MT1FP04733 61 aa6.06□□□□□ -1.44
THBS3-209ENST00000498500 KRTAP4-8Q9BYQ9 185 aa6.06□□□□□ -1.44
THBS3-209ENST00000498500 LINC00846Q9NV44 126 aa6.06□□□□□ -1.44
THBS3-209ENST00000498500 KRTAP10-10P60014 251 aa6.05□□□□□ -1.44
THBS3-209ENST00000498500 IGKV3D-7A0A0C4DH55 119 aa6.04□□□□□ -1.44
THBS3-209ENST00000498500 A8MWP4 228 aa6.04□□□□□ -1.44
THBS3-209ENST00000498500 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
THBS3-209ENST00000498500 FAM236DA0A1B0GTK5 79 aa6.03□□□□□ -1.44
THBS3-209ENST00000498500 FAM236CP0DP71 79 aa6.03□□□□□ -1.44
THBS3-209ENST00000498500 HRES1P13985 223 aa6.03□□□□□ -1.44
THBS3-209ENST00000498500 C8orf17Q9NRJ1 99 aa6.03□□□□□ -1.44
THBS3-209ENST00000498500 MPLKIPQ8TAP9 179 aa6.02□□□□□ -1.45
THBS3-209ENST00000498500 NDUFB1O75438 58 aa6.01□□□□□ -1.45
THBS3-209ENST00000498500 Q8N9P0 234 aaPredicted RBP6.01□□□□□ -1.45
THBS3-209ENST00000498500 ETDBQ3ZM63 59 aa6□□□□□ -1.45
THBS3-209ENST00000498500 ZCCHC13Q8WW36 166 aaKnown RBP6□□□□□ -1.45
THBS3-209ENST00000498500 MMP24-AS1A0A0U1RRL7 71 aa5.99□□□□□ -1.45
THBS3-209ENST00000498500 NREPQ16612 68 aa5.99□□□□□ -1.45
THBS3-209ENST00000498500 PRR15Q8IV56 129 aa5.99□□□□□ -1.45
THBS3-209ENST00000498500 K7EQZ3 153 aa5.96□□□□□ -1.46
THBS3-209ENST00000498500 KRTAP19-6Q3LI70 58 aa5.96□□□□□ -1.46
THBS3-209ENST00000498500 Q6ZVQ6 151 aa5.96□□□□□ -1.46
THBS3-209ENST00000498500 KRTAP6-3Q3LI67 103 aa5.94□□□□□ -1.46
THBS3-209ENST00000498500 TMEM254Q8TBM7 123 aa5.94□□□□□ -1.46
THBS3-209ENST00000498500 RBM12B-AS1Q9P1G2 102 aa5.94□□□□□ -1.46
THBS3-209ENST00000498500 SPINK7P58062 85 aa5.91□□□□□ -1.46
THBS3-209ENST00000498500 MRPL34Q9BQ48 92 aaKnown RBP5.91□□□□□ -1.46
THBS3-209ENST00000498500 hDV103S1A0JD37 113 aa5.9□□□□□ -1.46
THBS3-209ENST00000498500 BPY2O14599 106 aa5.9□□□□□ -1.46
THBS3-209ENST00000498500 Q8N9L7 120 aa5.88□□□□□ -1.47
THBS3-209ENST00000498500 WFDC13Q8IUB5 93 aa5.85□□□□□ -1.47
THBS3-209ENST00000498500 KRTAP4-12Q9BQ66 201 aa5.84□□□□□ -1.47
THBS3-209ENST00000498500 SVIPQ8NHG7 77 aa5.83□□□□□ -1.48
THBS3-209ENST00000498500 NDUFS5O43920 106 aa5.82□□□□□ -1.48
THBS3-209ENST00000498500 Q5W150 140 aa5.82□□□□□ -1.48
THBS3-209ENST00000498500 CASC2Q6XLA1 102 aa5.81□□□□□ -1.48
THBS3-209ENST00000498500 UBL5Q9BZL1 73 aa5.81□□□□□ -1.48
THBS3-209ENST00000498500 FAM240AA0A1B0GVK7 77 aa5.8□□□□□ -1.48
THBS3-209ENST00000498500 HCG22E2RYF7 251 aa5.79□□□□□ -1.48
THBS3-209ENST00000498500 ACYP1P07311 99 aa5.79□□□□□ -1.48
THBS3-209ENST00000498500 IMUPQ9GZP8 106 aa5.77□□□□□ -1.49
THBS3-209ENST00000498500 C7orf65Q6ZTY9 151 aa5.76□□□□□ -1.49
THBS3-209ENST00000498500 IGKV2D-30A0A075B6S6 120 aa5.75□□□□□ -1.49
THBS3-209ENST00000498500 IGKV2-30P06310 120 aa5.75□□□□□ -1.49
THBS3-209ENST00000498500 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
THBS3-209ENST00000498500 NEBP20929 6669 aa5.74□□□□□ -1.49
THBS3-209ENST00000498500 MT-ATP8P03928 68 aa5.73□□□□□ -1.49
THBS3-209ENST00000498500 CXCL6P80162 114 aa5.73□□□□□ -1.49
THBS3-209ENST00000498500 ANAPC13Q9BS18 74 aa5.72□□□□□ -1.49
THBS3-209ENST00000498500 KRTAP20-1Q3LI63 56 aa5.71□□□□□ -1.5
THBS3-209ENST00000498500 MUC12Q9UKN1 5478 aa5.71□□□□□ -1.5
THBS3-209ENST00000498500 H1FX-AS1Q4G0G2 97 aa5.7□□□□□ -1.5
THBS3-209ENST00000498500 C4orf26Q17RF5 130 aa5.65□□□□□ -1.5
THBS3-209ENST00000498500 LINC00643Q86TS7 51 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms