RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 C10orf55Q5SWW7 151 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 CCL4L1Q8NHW4 92 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 SMCR5Q8TEV8 140 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 NDUFA4L2Q9NRX3 87 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 TRBV25-1A0A075B6N4 114 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 SCTP09683 121 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 LINC00032P0C843 101 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 C17orf58Q2M2W7 97 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 LINC00526Q96FQ7 95 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 CCL26Q9Y258 94 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 IGLV1-51P01701 117 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 MYCNOSP40205 109 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 POLR2KP53803 58 aaKnown RBP0.74□□□□□ -2.29
XRN1-214ENST00000498077 MAPK1IP1LQ8NDC0 245 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 USH2AO75445 5202 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 COX17Q14061 63 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 C14orf144Q96I85 54 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 PRR34Q9NV39 138 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 NYNRINQ9P2P1 1898 aaKnown RBP0.74□□□□□ -2.29
XRN1-214ENST00000498077 PKD1P98161 4303 aa0.74□□□□□ -2.29
XRN1-214ENST00000498077 CCL18P55774 89 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 DEFB1P60022 68 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 PRO1854Q9UHT4 67 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 TRAV36DV7A0A075B6V5 113 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 DANCRP0C864 163 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 SPRR1BP22528 89 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 C1orf140Q5VVS0 124 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 ARPINQ7Z6K5 226 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 MYH2Q9UKX2 1941 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 TRBV10-1A0A0K0K1A3 114 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 H0Y9P7 68 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 Q6ZRU5 148 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 LINC00523Q86TU6 105 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 HIGD1BQ9P298 99 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 PIN4Q9Y237 131 aaKnown RBP0.73□□□□□ -2.29
XRN1-214ENST00000498077 M0R143 59 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 PLNP26678 52 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 KRTAP19-6Q3LI70 58 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.73□□□□□ -2.29
XRN1-214ENST00000498077 ALKAL1Q6UXT8 129 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 C8orf59Q8N0T1 100 aaPredicted RBP0.73□□□□□ -2.29
XRN1-214ENST00000498077 DNAH9Q9NYC9 4486 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 PRAP1Q96NZ9 151 aa0.73□□□□□ -2.29
XRN1-214ENST00000498077 MUC5ACP98088 5654 aa0.72□□□□□ -2.29
XRN1-214ENST00000498077 UQCR11O14957 56 aa0.72□□□□□ -2.29
XRN1-214ENST00000498077 H2BFSP57053 126 aa0.72□□□□□ -2.29
XRN1-214ENST00000498077 TANC2Q9HCD6 1990 aa0.72□□□□□ -2.29
XRN1-214ENST00000498077 A0A1B0GUT8 65 aa0.72□□□□□ -2.29
XRN1-214ENST00000498077 LGALS14Q8TCE9 139 aa0.72□□□□□ -2.29
XRN1-214ENST00000498077 LINC01546A6NGU7 62 aa0.72□□□□□ -2.29
XRN1-214ENST00000498077 C22orf39Q6P5X5 142 aa0.72□□□□□ -2.29
XRN1-214ENST00000498077 CNBPP62633 177 aaKnown RBP0.72□□□□□ -2.29
XRN1-214ENST00000498077 MYH8P13535 1937 aa0.72□□□□□ -2.29
XRN1-214ENST00000498077 VPS13DQ5THJ4 4388 aa0.72□□□□□ -2.29
XRN1-214ENST00000498077 KRTAP4-16G5E9R7 235 aaPredicted RBP0.71□□□□□ -2.3
XRN1-214ENST00000498077 LCE3EQ5T5B0 92 aa0.71□□□□□ -2.3
XRN1-214ENST00000498077 FCGBPQ9Y6R7 5405 aaPredicted RBP0.71□□□□□ -2.3
XRN1-214ENST00000498077 TRBV10-3A0A0K0K1G6 114 aa0.71□□□□□ -2.3
XRN1-214ENST00000498077 DEFB108AA8MXU0 73 aa0.71□□□□□ -2.3
XRN1-214ENST00000498077 FXYD2P54710 66 aa0.71□□□□□ -2.3
XRN1-214ENST00000498077 NOP10Q9NPE3 64 aaKnown RBP0.71□□□□□ -2.3
XRN1-214ENST00000498077 MCRIP1C9JLW8 97 aa0.71□□□□□ -2.3
XRN1-214ENST00000498077 ELOF1P60002 83 aaKnown RBP0.71□□□□□ -2.3
XRN1-214ENST00000498077 ALKAL2Q6UX46 152 aa0.71□□□□□ -2.3
XRN1-214ENST00000498077 KRTAP13-1Q8IUC0 172 aa0.71□□□□□ -2.3
XRN1-214ENST00000498077 TMEM263Q8WUH6 116 aaKnown RBP0.71□□□□□ -2.3
XRN1-214ENST00000498077 DNAH2Q9P225 4427 aa0.71□□□□□ -2.3
XRN1-214ENST00000498077 FAT1Q14517 4588 aa0.71□□□□□ -2.3
XRN1-214ENST00000498077 A0A1W2PRE2 83 aa0.71□□□□□ -2.3
XRN1-214ENST00000498077 SMIM21Q3B7S5 101 aa0.71□□□□□ -2.3
XRN1-214ENST00000498077 LYRM2Q9NU23 88 aaPredicted RBP0.71□□□□□ -2.3
XRN1-214ENST00000498077 PLXNA2O75051 1894 aa0.71□□□□□ -2.3
XRN1-214ENST00000498077 LINC00694P0DN24 101 aa0.7□□□□□ -2.3
XRN1-214ENST00000498077 Q5XG85 94 aa0.7□□□□□ -2.3
XRN1-214ENST00000498077 DNAH17Q9UFH2 4485 aa0.7□□□□□ -2.3
XRN1-214ENST00000498077 GIG44P09565 113 aaPredicted RBP0.7□□□□□ -2.3
XRN1-214ENST00000498077 GNG2P59768 71 aa0.7□□□□□ -2.3
XRN1-214ENST00000498077 LRP1Q07954 4544 aaKnown RBP0.7□□□□□ -2.3
XRN1-214ENST00000498077 C1QAP02745 245 aa0.7□□□□□ -2.3
XRN1-214ENST00000498077 CCL4P13236 92 aa0.7□□□□□ -2.3
XRN1-214ENST00000498077 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.7□□□□□ -2.3
XRN1-214ENST00000498077 UNQ6190/PRO20217Q6UXQ8 127 aa0.7□□□□□ -2.3
XRN1-214ENST00000498077 M0QY20 66 aa0.7□□□□□ -2.3
XRN1-214ENST00000498077 LINC01545Q5VT33 79 aa0.7□□□□□ -2.3
XRN1-214ENST00000498077 TAF9BQ9HBM6 251 aa0.7□□□□□ -2.3
XRN1-214ENST00000498077 CHD5Q8TDI0 1954 aa0.7□□□□□ -2.3
XRN1-214ENST00000498077 EFCAB10A6NFE3 127 aa0.7□□□□□ -2.3
XRN1-214ENST00000498077 EXPH5Q8NEV8 1989 aa0.7□□□□□ -2.3
XRN1-214ENST00000498077 K7EQG2 157 aa0.69□□□□□ -2.3
XRN1-214ENST00000498077 TCRBP04435 133 aa0.69□□□□□ -2.3
XRN1-214ENST00000498077 SELENOWP63302 87 aa0.69□□□□□ -2.3
XRN1-214ENST00000498077 RPL13AP3Q6NVV1 102 aa0.69□□□□□ -2.3
XRN1-214ENST00000498077 LCE3DQ9BYE3 92 aa0.69□□□□□ -2.3
XRN1-214ENST00000498077 MYH4Q9Y623 1939 aa0.69□□□□□ -2.3
XRN1-214ENST00000498077 TRBV7-4A0A0J9YYF1 115 aa0.69□□□□□ -2.3
XRN1-214ENST00000498077 SERF2P84101 59 aa0.69□□□□□ -2.3
XRN1-214ENST00000498077 IBA57-AS1B1ANH7 110 aa0.69□□□□□ -2.3
XRN1-214ENST00000498077 IER3IP1Q9Y5U9 82 aa0.69□□□□□ -2.3
XRN1-214ENST00000498077 CPAMD8Q8IZJ3 1885 aa0.69□□□□□ -2.3
XRN1-214ENST00000498077 CCL3L1P16619 93 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms