RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 TIMM17BO60830 172 aa3.34□□□□□ -1.87
TMEM39A-212ENST00000497993 IGKCP01834 107 aa3.34□□□□□ -1.87
TMEM39A-212ENST00000497993 NDUFA12Q9UI09 145 aa3.34□□□□□ -1.87
TMEM39A-212ENST00000497993 MYMXA0A1B0GTQ4 84 aa3.33□□□□□ -1.88
TMEM39A-212ENST00000497993 C3orf79P0CE67 100 aa3.33□□□□□ -1.88
TMEM39A-212ENST00000497993 KRTAP10-5P60370 271 aa3.33□□□□□ -1.88
TMEM39A-212ENST00000497993 KCNQ1DNQ9H478 68 aa3.33□□□□□ -1.88
TMEM39A-212ENST00000497993 SPATA45Q537H7 98 aa3.32□□□□□ -1.88
TMEM39A-212ENST00000497993 TEN1Q86WV5 123 aa3.32□□□□□ -1.88
TMEM39A-212ENST00000497993 SMIM13P0DJ93 91 aa3.31□□□□□ -1.88
TMEM39A-212ENST00000497993 CRYGAP11844 174 aa3.31□□□□□ -1.88
TMEM39A-212ENST00000497993 ANAPC11Q9NYG5 84 aa3.31□□□□□ -1.88
TMEM39A-212ENST00000497993 FAM236AA0A1B0GUQ0 79 aa3.3□□□□□ -1.88
TMEM39A-212ENST00000497993 FAM236BA0A1B0GV22 79 aa3.3□□□□□ -1.88
TMEM39A-212ENST00000497993 IGLV6-57P01721 117 aa3.3□□□□□ -1.88
TMEM39A-212ENST00000497993 LINC00158P58513 81 aa3.3□□□□□ -1.88
TMEM39A-212ENST00000497993 KRTAP13-2Q52LG2 175 aa3.3□□□□□ -1.88
TMEM39A-212ENST00000497993 MEIG1Q5JSS6 88 aa3.3□□□□□ -1.88
TMEM39A-212ENST00000497993 ATOH7Q8N100 152 aa3.3□□□□□ -1.88
TMEM39A-212ENST00000497993 R4GN34 69 aa3.3□□□□□ -1.88
TMEM39A-212ENST00000497993 IGKV2-28A0A075B6P5 120 aa3.29□□□□□ -1.88
TMEM39A-212ENST00000497993 IGKV2D-28P01615 120 aa3.29□□□□□ -1.88
TMEM39A-212ENST00000497993 COX8AP10176 69 aa3.29□□□□□ -1.88
TMEM39A-212ENST00000497993 Q6ZQT0 140 aa3.29□□□□□ -1.88
TMEM39A-212ENST00000497993 HIGD1BQ9P298 99 aa3.29□□□□□ -1.88
TMEM39A-212ENST00000497993 SNCGO76070 127 aa3.28□□□□□ -1.88
TMEM39A-212ENST00000497993 PRLHP81277 87 aa3.28□□□□□ -1.88
TMEM39A-212ENST00000497993 SPRR4Q96PI1 79 aa3.28□□□□□ -1.88
TMEM39A-212ENST00000497993 RETNLBQ9BQ08 111 aa3.28□□□□□ -1.88
TMEM39A-212ENST00000497993 LPAP08519 4548 aa3.27□□□□□ -1.89
TMEM39A-212ENST00000497993 TRBV10-3A0A0K0K1G6 114 aa3.27□□□□□ -1.89
TMEM39A-212ENST00000497993 IFITM1P13164 125 aa3.27□□□□□ -1.89
TMEM39A-212ENST00000497993 RPS29P62273 56 aaKnown RBP3.27□□□□□ -1.89
TMEM39A-212ENST00000497993 HSD52Q0P140 79 aa3.27□□□□□ -1.89
TMEM39A-212ENST00000497993 Q6ZRX8 168 aa3.27□□□□□ -1.89
TMEM39A-212ENST00000497993 SPANXDQ9BXN6 97 aa3.26□□□□□ -1.89
TMEM39A-212ENST00000497993 C14orf132Q9NPU4 83 aa3.26□□□□□ -1.89
TMEM39A-212ENST00000497993 TRBV20-1A0A075B6N2 111 aa3.25□□□□□ -1.89
TMEM39A-212ENST00000497993 NCR3O14931 201 aa3.25□□□□□ -1.89
TMEM39A-212ENST00000497993 BAALC-AS2P0C853 105 aa3.25□□□□□ -1.89
TMEM39A-212ENST00000497993 HINT1P49773 126 aaPredicted RBP3.25□□□□□ -1.89
TMEM39A-212ENST00000497993 TMEM258P61165 79 aa3.25□□□□□ -1.89
TMEM39A-212ENST00000497993 BVES-AS1Q5T3Y7 98 aa3.25□□□□□ -1.89
TMEM39A-212ENST00000497993 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
TMEM39A-212ENST00000497993 SPAG11AQ6PDA7 123 aa3.25□□□□□ -1.89
TMEM39A-212ENST00000497993 GTF2H5Q6ZYL4 71 aa3.25□□□□□ -1.89
TMEM39A-212ENST00000497993 LINC00304Q8N9R0 145 aa3.25□□□□□ -1.89
TMEM39A-212ENST00000497993 LINC00308Q8TCZ7 52 aa3.25□□□□□ -1.89
TMEM39A-212ENST00000497993 NAA38Q9BRA0 125 aaKnown RBP3.25□□□□□ -1.89
TMEM39A-212ENST00000497993 Q9BRP9 147 aa3.25□□□□□ -1.89
TMEM39A-212ENST00000497993 TRAV23DV6A0A075B6W5 121 aa3.24□□□□□ -1.89
TMEM39A-212ENST00000497993 ETDCA0A1B0GVM5 59 aa3.24□□□□□ -1.89
TMEM39A-212ENST00000497993 ZNF815PA8K554 130 aa3.24□□□□□ -1.89
TMEM39A-212ENST00000497993 COX6CP09669 75 aa3.24□□□□□ -1.89
TMEM39A-212ENST00000497993 SPRR1BP22528 89 aa3.24□□□□□ -1.89
TMEM39A-212ENST00000497993 TPRXLQ17RH7 258 aa3.24□□□□□ -1.89
TMEM39A-212ENST00000497993 MUC17Q685J3 4493 aa3.23□□□□□ -1.89
TMEM39A-212ENST00000497993 hDV103S1A0JD37 113 aa3.23□□□□□ -1.89
TMEM39A-212ENST00000497993 TRACP01848 142 aa3.23□□□□□ -1.89
TMEM39A-212ENST00000497993 ASB16-AS1Q495Z4 193 aa3.23□□□□□ -1.89
TMEM39A-212ENST00000497993 FP248Q71RG6 208 aaPredicted RBP3.23□□□□□ -1.89
TMEM39A-212ENST00000497993 CLEC2BQ92478 149 aa3.23□□□□□ -1.89
TMEM39A-212ENST00000497993 RNF213Q63HN8 5207 aa3.23□□□□□ -1.89
TMEM39A-212ENST00000497993 ERC2-IT1O76042 136 aa3.22□□□□□ -1.89
TMEM39A-212ENST00000497993 ELOF1P60002 83 aaKnown RBP3.22□□□□□ -1.89
TMEM39A-212ENST00000497993 SSBP3-AS1Q7Z2R9 100 aa3.22□□□□□ -1.89
TMEM39A-212ENST00000497993 RAB37Q96AX2 223 aa3.22□□□□□ -1.89
TMEM39A-212ENST00000497993 K7EP34 96 aa3.21□□□□□ -1.9
TMEM39A-212ENST00000497993 SPINK1P00995 79 aa3.21□□□□□ -1.9
TMEM39A-212ENST00000497993 ROMO1P60602 79 aa3.21□□□□□ -1.9
TMEM39A-212ENST00000497993 S100A7L2Q5SY68 101 aa3.21□□□□□ -1.9
TMEM39A-212ENST00000497993 TRAV13-2A0A0B4J235 113 aa3.2□□□□□ -1.9
TMEM39A-212ENST00000497993 HRES1P13985 223 aa3.2□□□□□ -1.9
TMEM39A-212ENST00000497993 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
TMEM39A-212ENST00000497993 IGLV5-48A0A075B6I7 105 aa3.19□□□□□ -1.9
TMEM39A-212ENST00000497993 A0A1W2PNM2 257 aa3.19□□□□□ -1.9
TMEM39A-212ENST00000497993 C20orf166-AS1Q96NR2 134 aa3.19□□□□□ -1.9
TMEM39A-212ENST00000497993 A0A1W2PPM0 123 aa3.18□□□□□ -1.9
TMEM39A-212ENST00000497993 NPC2P61916 151 aa3.18□□□□□ -1.9
TMEM39A-212ENST00000497993 PRO1854Q9UHT4 67 aa3.18□□□□□ -1.9
TMEM39A-212ENST00000497993 A8MU10 97 aa3.17□□□□□ -1.9
TMEM39A-212ENST00000497993 F8W1H4 67 aa3.17□□□□□ -1.9
TMEM39A-212ENST00000497993 H0YGX0 51 aa3.17□□□□□ -1.9
TMEM39A-212ENST00000497993 COX7BP24311 80 aa3.17□□□□□ -1.9
TMEM39A-212ENST00000497993 KRTAP13-3Q3SY46 172 aa3.17□□□□□ -1.9
TMEM39A-212ENST00000497993 MUSTN1Q8IVN3 82 aa3.17□□□□□ -1.9
TMEM39A-212ENST00000497993 TMEM254Q8TBM7 123 aa3.17□□□□□ -1.9
TMEM39A-212ENST00000497993 SPCS1Q9Y6A9 102 aa3.17□□□□□ -1.9
TMEM39A-212ENST00000497993 MUC2Q02817 5179 aa3.17□□□□□ -1.9
TMEM39A-212ENST00000497993 CCDC179H3BU77 68 aa3.16□□□□□ -1.9
TMEM39A-212ENST00000497993 MOBPQ13875 183 aa3.16□□□□□ -1.9
TMEM39A-212ENST00000497993 ATP11AUNQ6ZP68 121 aa3.16□□□□□ -1.9
TMEM39A-212ENST00000497993 TEX49A0A1B0GTD5 131 aa3.15□□□□□ -1.91
TMEM39A-212ENST00000497993 H3BUT2 72 aa3.15□□□□□ -1.91
TMEM39A-212ENST00000497993 SMIM11BQ8TCY0 68 aa3.15□□□□□ -1.91
TMEM39A-212ENST00000497993 A0A087WSZ3 146 aa3.14□□□□□ -1.91
TMEM39A-212ENST00000497993 DNAL4O96015 105 aa3.14□□□□□ -1.91
TMEM39A-212ENST00000497993 ATXN8Q156A1 80 aa3.14□□□□□ -1.91
TMEM39A-212ENST00000497993 PPDPFLQ8WWR9 84 aa3.14□□□□□ -1.91
TMEM39A-212ENST00000497993 PRO2289Q9P1D8 64 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms