RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 A0A087X002 238 aa11.53□□□□□ -0.56
ACTN4-208ENST00000497637 Q8N9L7 120 aa11.53□□□□□ -0.56
ACTN4-208ENST00000497637 LPAP08519 4548 aa11.53□□□□□ -0.56
ACTN4-208ENST00000497637 J3KT08 172 aa11.49□□□□□ -0.57
ACTN4-208ENST00000497637 DEFB116Q30KQ4 102 aa11.48□□□□□ -0.57
ACTN4-208ENST00000497637 K7EQZ3 153 aa11.46□□□□□ -0.57
ACTN4-208ENST00000497637 Q96NJ1 140 aa11.46□□□□□ -0.57
ACTN4-208ENST00000497637 LCE2AQ5TA79 106 aaPredicted RBP11.45□□□□□ -0.58
ACTN4-208ENST00000497637 A8MWP4 228 aa11.44□□□□□ -0.58
ACTN4-208ENST00000497637 ASB16-AS1Q495Z4 193 aa11.42□□□□□ -0.58
ACTN4-208ENST00000497637 PRR15Q8IV56 129 aa11.41□□□□□ -0.58
ACTN4-208ENST00000497637 SMIM20Q8N5G0 67 aa11.41□□□□□ -0.58
ACTN4-208ENST00000497637 SERP2Q8N6R1 65 aa11.41□□□□□ -0.58
ACTN4-208ENST00000497637 Q5XG85 94 aa11.4□□□□□ -0.58
ACTN4-208ENST00000497637 TYMSOSQ8TAI1 123 aa11.4□□□□□ -0.58
ACTN4-208ENST00000497637 COX7CP15954 63 aa11.39□□□□□ -0.59
ACTN4-208ENST00000497637 TRAV7A0A075B6U4 112 aa11.36□□□□□ -0.59
ACTN4-208ENST00000497637 HCG22E2RYF7 251 aa11.36□□□□□ -0.59
ACTN4-208ENST00000497637 CCDC179H3BU77 68 aa11.36□□□□□ -0.59
ACTN4-208ENST00000497637 UQCRQO14949 82 aa11.36□□□□□ -0.59
ACTN4-208ENST00000497637 NDUFB1O75438 58 aa11.36□□□□□ -0.59
ACTN4-208ENST00000497637 PRR26Q8N8Z3 221 aa11.35□□□□□ -0.59
ACTN4-208ENST00000497637 C4orf48Q5BLP8 95 aa11.33□□□□□ -0.6
ACTN4-208ENST00000497637 LIMD2Q9BT23 127 aa11.3□□□□□ -0.6
ACTN4-208ENST00000497637 SPINK1P00995 79 aa11.29□□□□□ -0.6
ACTN4-208ENST00000497637 SPAG11AQ6PDA7 123 aa11.29□□□□□ -0.6
ACTN4-208ENST00000497637 A0A1B0GVX0 72 aa11.28□□□□□ -0.6
ACTN4-208ENST00000497637 OCR1Q9BZK8 76 aa11.28□□□□□ -0.6
ACTN4-208ENST00000497637 FSIP2Q5CZC0 6907 aa11.28□□□□□ -0.6
ACTN4-208ENST00000497637 LINC00304Q8N9R0 145 aa11.27□□□□□ -0.61
ACTN4-208ENST00000497637 MMP24-AS1A0A0U1RRL7 71 aa11.26□□□□□ -0.61
ACTN4-208ENST00000497637 RPS29P62273 56 aaKnown RBP11.26□□□□□ -0.61
ACTN4-208ENST00000497637 C1orf195Q5TG92 126 aa11.26□□□□□ -0.61
ACTN4-208ENST00000497637 CASC2Q6XLA1 102 aa11.26□□□□□ -0.61
ACTN4-208ENST00000497637 WFDC13Q8IUB5 93 aa11.26□□□□□ -0.61
ACTN4-208ENST00000497637 C8orf17Q9NRJ1 99 aa11.24□□□□□ -0.61
ACTN4-208ENST00000497637 CRCT1Q9UGL9 99 aa11.22□□□□□ -0.61
ACTN4-208ENST00000497637 IGHV6-1A0A0B4J1U7 121 aa11.21□□□□□ -0.61
ACTN4-208ENST00000497637 PRR4Q16378 134 aa11.2□□□□□ -0.62
ACTN4-208ENST00000497637 hDV103S1A0JD37 113 aa11.19□□□□□ -0.62
ACTN4-208ENST00000497637 C8orf87E5RJ46 101 aa11.17□□□□□ -0.62
ACTN4-208ENST00000497637 LCE2DQ5TA82 110 aaPredicted RBP11.15□□□□□ -0.62
ACTN4-208ENST00000497637 TMEM254Q8TBM7 123 aa11.14□□□□□ -0.63
ACTN4-208ENST00000497637 NOTCH2NLQ7Z3S9 236 aa11.13□□□□□ -0.63
ACTN4-208ENST00000497637 C20orf197Q8N268 126 aa11.13□□□□□ -0.63
ACTN4-208ENST00000497637 C5orf47Q569G3 176 aa11.1□□□□□ -0.63
ACTN4-208ENST00000497637 MRPL34Q9BQ48 92 aaKnown RBP11.1□□□□□ -0.63
ACTN4-208ENST00000497637 KLKP1Q107X0 134 aa11.09□□□□□ -0.63
ACTN4-208ENST00000497637 LINC00313P59037 77 aa11.06□□□□□ -0.64
ACTN4-208ENST00000497637 CYSTM1Q9H1C7 97 aa11.06□□□□□ -0.64
ACTN4-208ENST00000497637 TP53AIP1Q9HCN2 124 aa11.05□□□□□ -0.64
ACTN4-208ENST00000497637 SNURFQ9Y675 71 aa11.03□□□□□ -0.64
ACTN4-208ENST00000497637 NDUFC1O43677 76 aa10.99□□□□□ -0.65
ACTN4-208ENST00000497637 MP68P56378 58 aa10.99□□□□□ -0.65
ACTN4-208ENST00000497637 H3BPC8 53 aa10.98□□□□□ -0.65
ACTN4-208ENST00000497637 ZCCHC13Q8WW36 166 aaKnown RBP10.98□□□□□ -0.65
ACTN4-208ENST00000497637 H0Y9P7 68 aa10.97□□□□□ -0.65
ACTN4-208ENST00000497637 NDUFS5O43920 106 aa10.97□□□□□ -0.65
ACTN4-208ENST00000497637 KRTAP16-1A8MUX0 517 aa10.96□□□□□ -0.65
ACTN4-208ENST00000497637 H7BZZ5 65 aa10.95□□□□□ -0.66
ACTN4-208ENST00000497637 TMEM258P61165 79 aa10.94□□□□□ -0.66
ACTN4-208ENST00000497637 Q8N9P0 234 aaPredicted RBP10.94□□□□□ -0.66
ACTN4-208ENST00000497637 TRAV22A0A0B4J277 110 aa10.93□□□□□ -0.66
ACTN4-208ENST00000497637 LINC00208Q96KT6 92 aa10.9□□□□□ -0.66
ACTN4-208ENST00000497637 C1orf64Q8NEQ6 169 aa10.86□□□□□ -0.67
ACTN4-208ENST00000497637 KRTAP13-3Q3SY46 172 aa10.85□□□□□ -0.67
ACTN4-208ENST00000497637 RETNLBQ9BQ08 111 aa10.84□□□□□ -0.67
ACTN4-208ENST00000497637 Q5W150 140 aa10.83□□□□□ -0.68
ACTN4-208ENST00000497637 FP248Q71RG6 208 aaPredicted RBP10.81□□□□□ -0.68
ACTN4-208ENST00000497637 FAM236DA0A1B0GTK5 79 aa10.8□□□□□ -0.68
ACTN4-208ENST00000497637 FAM236CP0DP71 79 aa10.8□□□□□ -0.68
ACTN4-208ENST00000497637 ATP5EP56381 51 aaPredicted RBP10.78□□□□□ -0.68
ACTN4-208ENST00000497637 MUC17Q685J3 4493 aa10.76□□□□□ -0.69
ACTN4-208ENST00000497637 LOC101927531A0A1B0GV80 90 aa10.75□□□□□ -0.69
ACTN4-208ENST00000497637 TPRXLQ17RH7 258 aa10.75□□□□□ -0.69
ACTN4-208ENST00000497637 C9orf92A6NGG3 77 aa10.74□□□□□ -0.69
ACTN4-208ENST00000497637 A8MUU9 505 aa10.73□□□□□ -0.69
ACTN4-208ENST00000497637 C20orf166-AS1Q96NR2 134 aa10.73□□□□□ -0.69
ACTN4-208ENST00000497637 IGLV7-46A0A075B6I9 117 aa10.68□□□□□ -0.7
ACTN4-208ENST00000497637 SPANXA2-OT1Q8N9U9 137 aa10.68□□□□□ -0.7
ACTN4-208ENST00000497637 RPS28P62857 69 aaKnown RBP10.67□□□□□ -0.7
ACTN4-208ENST00000497637 CYP4F30PQ9H0H9 118 aa10.67□□□□□ -0.7
ACTN4-208ENST00000497637 IGKV2-30P06310 120 aa10.66□□□□□ -0.7
ACTN4-208ENST00000497637 PCOTHQ58A44 107 aa10.64□□□□□ -0.71
ACTN4-208ENST00000497637 Q75L30 129 aa10.63□□□□□ -0.71
ACTN4-208ENST00000497637 SERP1Q9Y6X1 66 aa10.62□□□□□ -0.71
ACTN4-208ENST00000497637 KRTAP9-7A8MTY7 169 aa10.6□□□□□ -0.71
ACTN4-208ENST00000497637 IGKV2D-30A0A075B6S6 120 aa10.52□□□□□ -0.73
ACTN4-208ENST00000497637 XP32Q5T750 250 aa10.5□□□□□ -0.73
ACTN4-208ENST00000497637 HRES1P13985 223 aa10.49□□□□□ -0.73
ACTN4-208ENST00000497637 RPL37P61927 97 aaKnown RBP10.49□□□□□ -0.73
ACTN4-208ENST00000497637 C7orf65Q6ZTY9 151 aa10.49□□□□□ -0.73
ACTN4-208ENST00000497637 SEC61BP60468 96 aaKnown RBP10.46□□□□□ -0.73
ACTN4-208ENST00000497637 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.45□□□□□ -0.74
ACTN4-208ENST00000497637 ATP11AUNQ6ZP68 121 aa10.43□□□□□ -0.74
ACTN4-208ENST00000497637 KRTAP4-1Q9BYQ7 146 aa10.42□□□□□ -0.74
ACTN4-208ENST00000497637 SPINK7P58062 85 aa10.37□□□□□ -0.75
ACTN4-208ENST00000497637 LCE2CQ5TA81 110 aa10.37□□□□□ -0.75
ACTN4-208ENST00000497637 SMIM26A0A096LP01 95 aa10.36□□□□□ -0.75
ACTN4-208ENST00000497637 DMAC1Q96GE9 116 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms