RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 Q86TA4 180 aa1.63□□□□□ -2.15
EXOSC3-208ENST00000496910 ZCCHC13Q8WW36 166 aaKnown RBP1.63□□□□□ -2.15
EXOSC3-208ENST00000496910 Q96NJ1 140 aa1.63□□□□□ -2.15
EXOSC3-208ENST00000496910 WFDC6Q9BQY6 131 aa1.63□□□□□ -2.15
EXOSC3-208ENST00000496910 CFDP00746 253 aaPredicted RBP1.62□□□□□ -2.15
EXOSC3-208ENST00000496910 MT1HP80294 61 aa1.62□□□□□ -2.15
EXOSC3-208ENST00000496910 PCOTHQ58A44 107 aa1.62□□□□□ -2.15
EXOSC3-208ENST00000496910 ZNF563Q8TA94 476 aa1.62□□□□□ -2.15
EXOSC3-208ENST00000496910 AMELXQ99217 191 aa1.62□□□□□ -2.15
EXOSC3-208ENST00000496910 PSENENQ9NZ42 101 aa1.62□□□□□ -2.15
EXOSC3-208ENST00000496910 R4GMQ9 66 aa1.62□□□□□ -2.15
EXOSC3-208ENST00000496910 KANTRA0A1W2PQU2 76 aa1.61□□□□□ -2.15
EXOSC3-208ENST00000496910 ZNF815PA8K554 130 aa1.61□□□□□ -2.15
EXOSC3-208ENST00000496910 F8VRH5 84 aa1.61□□□□□ -2.15
EXOSC3-208ENST00000496910 M0R135 149 aa1.61□□□□□ -2.15
EXOSC3-208ENST00000496910 PSMG4Q5JS54 123 aa1.61□□□□□ -2.15
EXOSC3-208ENST00000496910 UNQ6190/PRO20217Q6UXQ8 127 aa1.61□□□□□ -2.15
EXOSC3-208ENST00000496910 APLNQ9ULZ1 77 aa1.61□□□□□ -2.15
EXOSC3-208ENST00000496910 LINC01558Q9Y6Z2 57 aa1.61□□□□□ -2.15
EXOSC3-208ENST00000496910 IGKV4-1P06312 121 aa1.6□□□□□ -2.15
EXOSC3-208ENST00000496910 SAA2P0DJI9 122 aaPredicted RBP1.6□□□□□ -2.15
EXOSC3-208ENST00000496910 SPRR2DP22532 72 aa1.6□□□□□ -2.15
EXOSC3-208ENST00000496910 SMIM11AP58511 58 aa1.6□□□□□ -2.15
EXOSC3-208ENST00000496910 LINC00643Q86TS7 51 aa1.6□□□□□ -2.15
EXOSC3-208ENST00000496910 DEFB108BQ8NET1 73 aa1.6□□□□□ -2.15
EXOSC3-208ENST00000496910 PPP1R1CQ8WVI7 109 aa1.6□□□□□ -2.15
EXOSC3-208ENST00000496910 TRGV1A0A0A0MS02 117 aa1.59□□□□□ -2.15
EXOSC3-208ENST00000496910 IQCF6A8MYZ5 107 aa1.59□□□□□ -2.15
EXOSC3-208ENST00000496910 M0R3E3 92 aa1.59□□□□□ -2.15
EXOSC3-208ENST00000496910 KRTAP5-8O75690 187 aa1.59□□□□□ -2.15
EXOSC3-208ENST00000496910 HMGN2P05204 90 aaKnown RBP1.59□□□□□ -2.15
EXOSC3-208ENST00000496910 Q6ZQY7 126 aa1.59□□□□□ -2.15
EXOSC3-208ENST00000496910 BAGE2Q86Y30 109 aa1.59□□□□□ -2.15
EXOSC3-208ENST00000496910 C18orf32Q8TCD1 76 aa1.59□□□□□ -2.15
EXOSC3-208ENST00000496910 PRR15LQ9BU68 103 aa1.59□□□□□ -2.15
EXOSC3-208ENST00000496910 FLGP20930 4061 aaPredicted RBP1.58□□□□□ -2.16
EXOSC3-208ENST00000496910 CTXND1A0A1B0GTU2 59 aa1.58□□□□□ -2.16
EXOSC3-208ENST00000496910 C7orf77A4D0Y5 90 aa1.58□□□□□ -2.16
EXOSC3-208ENST00000496910 ACYP1P07311 99 aa1.58□□□□□ -2.16
EXOSC3-208ENST00000496910 ARMS2P0C7Q2 107 aa1.58□□□□□ -2.16
EXOSC3-208ENST00000496910 LYNX1P0DP58 116 aa1.58□□□□□ -2.16
EXOSC3-208ENST00000496910 CAV3P56539 151 aa1.58□□□□□ -2.16
EXOSC3-208ENST00000496910 KRTAP12-1P59990 96 aa1.58□□□□□ -2.16
EXOSC3-208ENST00000496910 BAGE3Q86Y29 109 aa1.58□□□□□ -2.16
EXOSC3-208ENST00000496910 ZNF137PP52743 207 aa1.57□□□□□ -2.16
EXOSC3-208ENST00000496910 PROK2Q9HC23 129 aa1.57□□□□□ -2.16
EXOSC3-208ENST00000496910 A0A087WVE0 104 aa1.56□□□□□ -2.16
EXOSC3-208ENST00000496910 TRAV1-2A0A0B4J238 106 aa1.56□□□□□ -2.16
EXOSC3-208ENST00000496910 UQCR11O14957 56 aa1.56□□□□□ -2.16
EXOSC3-208ENST00000496910 HEPN1Q6WQI6 88 aa1.56□□□□□ -2.16
EXOSC3-208ENST00000496910 MYMXA0A1B0GTQ4 84 aa1.55□□□□□ -2.16
EXOSC3-208ENST00000496910 SPINT3P49223 89 aa1.55□□□□□ -2.16
EXOSC3-208ENST00000496910 SPRR4Q96PI1 79 aa1.55□□□□□ -2.16
EXOSC3-208ENST00000496910 LINC00472Q9H8W2 130 aa1.55□□□□□ -2.16
EXOSC3-208ENST00000496910 A0A1B0GWA3 101 aa1.54□□□□□ -2.16
EXOSC3-208ENST00000496910 LEPROTL1O95214 131 aa1.54□□□□□ -2.16
EXOSC3-208ENST00000496910 ACYP2P14621 99 aa1.54□□□□□ -2.16
EXOSC3-208ENST00000496910 HMGN3Q15651 99 aa1.53□□□□□ -2.16
EXOSC3-208ENST00000496910 C10orf99Q6UWK7 81 aa1.53□□□□□ -2.16
EXOSC3-208ENST00000496910 TRBV30A0A0K0K1B3 111 aa1.52□□□□□ -2.17
EXOSC3-208ENST00000496910 D6R8Y8 96 aa1.52□□□□□ -2.17
EXOSC3-208ENST00000496910 MGPP08493 103 aa1.52□□□□□ -2.17
EXOSC3-208ENST00000496910 SMIM13P0DJ93 91 aa1.52□□□□□ -2.17
EXOSC3-208ENST00000496910 PLGLAQ15195 96 aa1.52□□□□□ -2.17
EXOSC3-208ENST00000496910 DEFB110Q30KQ9 67 aa1.52□□□□□ -2.17
EXOSC3-208ENST00000496910 MUSTN1Q8IVN3 82 aa1.52□□□□□ -2.17
EXOSC3-208ENST00000496910 PLAC8Q9NZF1 115 aa1.52□□□□□ -2.17
EXOSC3-208ENST00000496910 M0R2T5 61 aa1.51□□□□□ -2.17
EXOSC3-208ENST00000496910 NCR3O14931 201 aa1.51□□□□□ -2.17
EXOSC3-208ENST00000496910 CEBPZOSA8MTT3 80 aa1.5□□□□□ -2.17
EXOSC3-208ENST00000496910 DEFB107AQ8IZN7 70 aa1.5□□□□□ -2.17
EXOSC3-208ENST00000496910 GVQW2A0A096LPI5 108 aaPredicted RBP1.49□□□□□ -2.17
EXOSC3-208ENST00000496910 G3V318 75 aa1.49□□□□□ -2.17
EXOSC3-208ENST00000496910 MT4P47944 62 aa1.49□□□□□ -2.17
EXOSC3-208ENST00000496910 SPINK7P58062 85 aa1.49□□□□□ -2.17
EXOSC3-208ENST00000496910 COX17Q14061 63 aa1.49□□□□□ -2.17
EXOSC3-208ENST00000496910 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.49□□□□□ -2.17
EXOSC3-208ENST00000496910 C6orf201Q7Z4U5 140 aa1.49□□□□□ -2.17
EXOSC3-208ENST00000496910 SMIM4Q8WVI0 70 aa1.49□□□□□ -2.17
EXOSC3-208ENST00000496910 UBE2D4Q9Y2X8 147 aa1.49□□□□□ -2.17
EXOSC3-208ENST00000496910 UMAD1C9J7I0 102 aa1.48□□□□□ -2.17
EXOSC3-208ENST00000496910 Q6JHZ5 121 aa1.48□□□□□ -2.17
EXOSC3-208ENST00000496910 LINC00575Q6W349 94 aa1.48□□□□□ -2.17
EXOSC3-208ENST00000496910 PLAC4Q8WY50 150 aa1.48□□□□□ -2.17
EXOSC3-208ENST00000496910 SPATA8Q6RVD6 105 aa1.47□□□□□ -2.17
EXOSC3-208ENST00000496910 Q6ZRX8 168 aa1.47□□□□□ -2.17
EXOSC3-208ENST00000496910 TMEM263Q8WUH6 116 aaKnown RBP1.47□□□□□ -2.17
EXOSC3-208ENST00000496910 S100ZQ8WXG8 99 aa1.47□□□□□ -2.17
EXOSC3-208ENST00000496910 H3BSH0 61 aa1.46□□□□□ -2.18
EXOSC3-208ENST00000496910 KRTAP19-2Q3LHN2 52 aa1.46□□□□□ -2.18
EXOSC3-208ENST00000496910 C10orf113Q5VZT2 155 aa1.46□□□□□ -2.18
EXOSC3-208ENST00000496910 SMIM11BQ8TCY0 68 aa1.46□□□□□ -2.18
EXOSC3-208ENST00000496910 KRTAP4-1Q9BYQ7 146 aa1.46□□□□□ -2.18
EXOSC3-208ENST00000496910 TRBV7-4A0A0J9YYF1 115 aa1.45□□□□□ -2.18
EXOSC3-208ENST00000496910 H0Y9P7 68 aa1.45□□□□□ -2.18
EXOSC3-208ENST00000496910 RPL37P61927 97 aaKnown RBP1.45□□□□□ -2.18
EXOSC3-208ENST00000496910 SPRR2FQ96RM1 72 aa1.45□□□□□ -2.18
EXOSC3-208ENST00000496910 GCHFRP30047 84 aa1.44□□□□□ -2.18
EXOSC3-208ENST00000496910 KRTAP13-1Q8IUC0 172 aa1.44□□□□□ -2.18
EXOSC3-208ENST00000496910 UBE2DNLQ8IWF7 75 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms