RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 IGKV4-1P06312 121 aa8.48□□□□□ -1.05
GAPDH-210ENST00000496049 ATP5EP2Q5VTU8 51 aa8.48□□□□□ -1.05
GAPDH-210ENST00000496049 FP248Q71RG6 208 aaPredicted RBP8.48□□□□□ -1.05
GAPDH-210ENST00000496049 Q96NJ1 140 aa8.48□□□□□ -1.05
GAPDH-210ENST00000496049 RETNLBQ9BQ08 111 aa8.48□□□□□ -1.05
GAPDH-210ENST00000496049 NDUFB1O75438 58 aa8.45□□□□□ -1.06
GAPDH-210ENST00000496049 DEFB116Q30KQ4 102 aa8.45□□□□□ -1.06
GAPDH-210ENST00000496049 LINC00643Q86TS7 51 aa8.45□□□□□ -1.06
GAPDH-210ENST00000496049 CXCL6P80162 114 aa8.44□□□□□ -1.06
GAPDH-210ENST00000496049 A8MWP4 228 aa8.42□□□□□ -1.06
GAPDH-210ENST00000496049 PRR4Q16378 134 aa8.42□□□□□ -1.06
GAPDH-210ENST00000496049 CDIP1Q9H305 208 aa8.4□□□□□ -1.06
GAPDH-210ENST00000496049 IGLV7-46A0A075B6I9 117 aa8.39□□□□□ -1.07
GAPDH-210ENST00000496049 A0A1B0GVX0 72 aa8.38□□□□□ -1.07
GAPDH-210ENST00000496049 IGKV3D-7A0A0C4DH55 119 aa8.37□□□□□ -1.07
GAPDH-210ENST00000496049 DSCR10P59022 87 aa8.37□□□□□ -1.07
GAPDH-210ENST00000496049 IGHV6-1A0A0B4J1U7 121 aa8.36□□□□□ -1.07
GAPDH-210ENST00000496049 C8orf87E5RJ46 101 aa8.35□□□□□ -1.07
GAPDH-210ENST00000496049 K7EQZ3 153 aa8.35□□□□□ -1.07
GAPDH-210ENST00000496049 PRR15Q8IV56 129 aa8.35□□□□□ -1.07
GAPDH-210ENST00000496049 HIST1H4AP62805 103 aaKnown RBP8.33□□□□□ -1.08
GAPDH-210ENST00000496049 Q8N9L7 120 aa8.33□□□□□ -1.08
GAPDH-210ENST00000496049 LINC00313P59037 77 aa8.3□□□□□ -1.08
GAPDH-210ENST00000496049 TPRXLQ17RH7 258 aa8.29□□□□□ -1.08
GAPDH-210ENST00000496049 C8orf17Q9NRJ1 99 aa8.29□□□□□ -1.08
GAPDH-210ENST00000496049 C9orf92A6NGG3 77 aa8.28□□□□□ -1.08
GAPDH-210ENST00000496049 LCE2DQ5TA82 110 aaPredicted RBP8.28□□□□□ -1.08
GAPDH-210ENST00000496049 KRTAP13-3Q3SY46 172 aa8.27□□□□□ -1.09
GAPDH-210ENST00000496049 HCG22E2RYF7 251 aa8.26□□□□□ -1.09
GAPDH-210ENST00000496049 MT-ATP8P03928 68 aa8.26□□□□□ -1.09
GAPDH-210ENST00000496049 IMUPQ9GZP8 106 aa8.26□□□□□ -1.09
GAPDH-210ENST00000496049 MMP24-AS1A0A0U1RRL7 71 aa8.25□□□□□ -1.09
GAPDH-210ENST00000496049 hDV103S1A0JD37 113 aa8.24□□□□□ -1.09
GAPDH-210ENST00000496049 CASC2Q6XLA1 102 aa8.24□□□□□ -1.09
GAPDH-210ENST00000496049 WFDC13Q8IUB5 93 aa8.22□□□□□ -1.09
GAPDH-210ENST00000496049 TMEM254Q8TBM7 123 aa8.22□□□□□ -1.09
GAPDH-210ENST00000496049 NOTCH2NLQ7Z3S9 236 aa8.21□□□□□ -1.1
GAPDH-210ENST00000496049 A0A087WVE0 104 aa8.19□□□□□ -1.1
GAPDH-210ENST00000496049 MRPL34Q9BQ48 92 aaKnown RBP8.19□□□□□ -1.1
GAPDH-210ENST00000496049 KRTAP16-1A8MUX0 517 aa8.17□□□□□ -1.1
GAPDH-210ENST00000496049 XP32Q5T750 250 aa8.17□□□□□ -1.1
GAPDH-210ENST00000496049 NDUFS5O43920 106 aa8.15□□□□□ -1.1
GAPDH-210ENST00000496049 Q75L30 129 aa8.14□□□□□ -1.11
GAPDH-210ENST00000496049 C20orf166-AS1Q96NR2 134 aa8.14□□□□□ -1.11
GAPDH-210ENST00000496049 KRTAP9-7A8MTY7 169 aa8.13□□□□□ -1.11
GAPDH-210ENST00000496049 A8MUU9 505 aa8.12□□□□□ -1.11
GAPDH-210ENST00000496049 SCGB1A1P11684 91 aa8.12□□□□□ -1.11
GAPDH-210ENST00000496049 Q8N9P0 234 aaPredicted RBP8.12□□□□□ -1.11
GAPDH-210ENST00000496049 FAM236AA0A1B0GUQ0 79 aa8.11□□□□□ -1.11
GAPDH-210ENST00000496049 FAM236BA0A1B0GV22 79 aa8.11□□□□□ -1.11
GAPDH-210ENST00000496049 RPL37P61927 97 aaKnown RBP8.11□□□□□ -1.11
GAPDH-210ENST00000496049 ATP11AUNQ6ZP68 121 aa8.08□□□□□ -1.12
GAPDH-210ENST00000496049 TP53AIP1Q9HCN2 124 aa8.08□□□□□ -1.12
GAPDH-210ENST00000496049 SEC61BP60468 96 aaKnown RBP8.06□□□□□ -1.12
GAPDH-210ENST00000496049 ATOX1O00244 68 aa8.04□□□□□ -1.12
GAPDH-210ENST00000496049 SMIM20Q8N5G0 67 aa8.03□□□□□ -1.12
GAPDH-210ENST00000496049 ZCCHC13Q8WW36 166 aaKnown RBP8.03□□□□□ -1.12
GAPDH-210ENST00000496049 UQCRQO14949 82 aa8.01□□□□□ -1.13
GAPDH-210ENST00000496049 OCR1Q9BZK8 76 aa7.98□□□□□ -1.13
GAPDH-210ENST00000496049 MUC17Q685J3 4493 aa7.98□□□□□ -1.13
GAPDH-210ENST00000496049 TRAV22A0A0B4J277 110 aa7.97□□□□□ -1.13
GAPDH-210ENST00000496049 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.97□□□□□ -1.13
GAPDH-210ENST00000496049 PCOTHQ58A44 107 aa7.97□□□□□ -1.13
GAPDH-210ENST00000496049 TRAV7A0A075B6U4 112 aa7.94□□□□□ -1.14
GAPDH-210ENST00000496049 MP68P56378 58 aa7.93□□□□□ -1.14
GAPDH-210ENST00000496049 H0Y9P7 68 aa7.92□□□□□ -1.14
GAPDH-210ENST00000496049 C5orf47Q569G3 176 aa7.91□□□□□ -1.14
GAPDH-210ENST00000496049 Q5W150 140 aa7.91□□□□□ -1.14
GAPDH-210ENST00000496049 SERP2Q8N6R1 65 aa7.89□□□□□ -1.15
GAPDH-210ENST00000496049 LOC101927531A0A1B0GV80 90 aa7.87□□□□□ -1.15
GAPDH-210ENST00000496049 H3BPC8 53 aa7.87□□□□□ -1.15
GAPDH-210ENST00000496049 C7orf65Q6ZTY9 151 aa7.87□□□□□ -1.15
GAPDH-210ENST00000496049 ANAPC13Q9BS18 74 aa7.87□□□□□ -1.15
GAPDH-210ENST00000496049 IGKV2D-30A0A075B6S6 120 aa7.86□□□□□ -1.15
GAPDH-210ENST00000496049 IGKV2-30P06310 120 aa7.86□□□□□ -1.15
GAPDH-210ENST00000496049 SPINK7P58062 85 aa7.83□□□□□ -1.16
GAPDH-210ENST00000496049 C1orf64Q8NEQ6 169 aa7.83□□□□□ -1.16
GAPDH-210ENST00000496049 LINC00208Q96KT6 92 aa7.83□□□□□ -1.16
GAPDH-210ENST00000496049 COX7CP15954 63 aa7.8□□□□□ -1.16
GAPDH-210ENST00000496049 C20orf197Q8N268 126 aa7.76□□□□□ -1.17
GAPDH-210ENST00000496049 CYP4F30PQ9H0H9 118 aa7.76□□□□□ -1.17
GAPDH-210ENST00000496049 KRTAP4-1Q9BYQ7 146 aa7.72□□□□□ -1.17
GAPDH-210ENST00000496049 RBM12B-AS1Q9P1G2 102 aa7.72□□□□□ -1.17
GAPDH-210ENST00000496049 SNURFQ9Y675 71 aa7.71□□□□□ -1.18
GAPDH-210ENST00000496049 HRES1P13985 223 aa7.69□□□□□ -1.18
GAPDH-210ENST00000496049 KLKP1Q107X0 134 aa7.69□□□□□ -1.18
GAPDH-210ENST00000496049 FAM236DA0A1B0GTK5 79 aa7.66□□□□□ -1.18
GAPDH-210ENST00000496049 FAM236CP0DP71 79 aa7.66□□□□□ -1.18
GAPDH-210ENST00000496049 NDUFC1O43677 76 aa7.65□□□□□ -1.18
GAPDH-210ENST00000496049 C4orf26Q17RF5 130 aa7.63□□□□□ -1.19
GAPDH-210ENST00000496049 SSPOA2VEC9 5147 aa7.62□□□□□ -1.19
GAPDH-210ENST00000496049 CCDC179H3BU77 68 aa7.62□□□□□ -1.19
GAPDH-210ENST00000496049 COX6B2Q6YFQ2 88 aa7.62□□□□□ -1.19
GAPDH-210ENST00000496049 MPLKIPQ8TAP9 179 aa7.61□□□□□ -1.19
GAPDH-210ENST00000496049 SYNE2Q8WXH0 6885 aaKnown RBP7.59□□□□□ -1.2
GAPDH-210ENST00000496049 LCE2CQ5TA81 110 aa7.57□□□□□ -1.2
GAPDH-210ENST00000496049 USH2AO75445 5202 aa7.56□□□□□ -1.2
GAPDH-210ENST00000496049 LORP23490 312 aaPredicted RBP7.56□□□□□ -1.2
GAPDH-210ENST00000496049 FCGBPQ9Y6R7 5405 aaPredicted RBP7.55□□□□□ -1.2
GAPDH-210ENST00000496049 A8MUN3 132 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms