RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 COX6CP09669 75 aa6.44□□□□□ -1.38
COL1A1-209ENST00000495677 NAA38Q9BRA0 125 aaKnown RBP6.44□□□□□ -1.38
COL1A1-209ENST00000495677 SCGB1C2P0DMR2 95 aa6.43□□□□□ -1.38
COL1A1-209ENST00000495677 FABP2P12104 132 aa6.43□□□□□ -1.38
COL1A1-209ENST00000495677 KRTAP20-1Q3LI63 56 aa6.42□□□□□ -1.38
COL1A1-209ENST00000495677 A0A1B0GX51 115 aa6.4□□□□□ -1.38
COL1A1-209ENST00000495677 Q8N9P0 234 aaPredicted RBP6.4□□□□□ -1.38
COL1A1-209ENST00000495677 ORMDL1Q9P0S3 153 aa6.4□□□□□ -1.38
COL1A1-209ENST00000495677 NEBP20929 6669 aa6.4□□□□□ -1.39
COL1A1-209ENST00000495677 NDUFV3P56181 108 aaKnown RBP6.39□□□□□ -1.39
COL1A1-209ENST00000495677 MUC12Q9UKN1 5478 aa6.38□□□□□ -1.39
COL1A1-209ENST00000495677 SIGMAR1Q99720 223 aa6.37□□□□□ -1.39
COL1A1-209ENST00000495677 H3BMG7 143 aa6.36□□□□□ -1.39
COL1A1-209ENST00000495677 GHRHP01286 108 aa6.36□□□□□ -1.39
COL1A1-209ENST00000495677 IGKV4-1P06312 121 aa6.35□□□□□ -1.39
COL1A1-209ENST00000495677 SPINK7P58062 85 aa6.33□□□□□ -1.4
COL1A1-209ENST00000495677 A0A1W2PNM2 257 aa6.32□□□□□ -1.4
COL1A1-209ENST00000495677 TRACP01848 142 aa6.32□□□□□ -1.4
COL1A1-209ENST00000495677 ATXN8Q156A1 80 aa6.32□□□□□ -1.4
COL1A1-209ENST00000495677 TMEM256-PLSCR3K7ERE1 68 aa6.31□□□□□ -1.4
COL1A1-209ENST00000495677 H3BQ85 93 aa6.3□□□□□ -1.4
COL1A1-209ENST00000495677 LYRM7Q5U5X0 104 aa6.3□□□□□ -1.4
COL1A1-209ENST00000495677 LINC00472Q9H8W2 130 aa6.3□□□□□ -1.4
COL1A1-209ENST00000495677 TRBV7-4A0A0J9YYF1 115 aa6.29□□□□□ -1.4
COL1A1-209ENST00000495677 ANKRD29Q8N6D5 301 aa6.29□□□□□ -1.4
COL1A1-209ENST00000495677 ZCCHC13Q8WW36 166 aaKnown RBP6.29□□□□□ -1.4
COL1A1-209ENST00000495677 VPS25Q9BRG1 176 aa6.29□□□□□ -1.4
COL1A1-209ENST00000495677 BAALC-AS2P0C853 105 aa6.28□□□□□ -1.4
COL1A1-209ENST00000495677 PCP4L1A6NKN8 68 aa6.27□□□□□ -1.41
COL1A1-209ENST00000495677 C8orf87E5RJ46 101 aa6.27□□□□□ -1.41
COL1A1-209ENST00000495677 TAX1BP3O14907 124 aa6.27□□□□□ -1.41
COL1A1-209ENST00000495677 IGHV6-1A0A0B4J1U7 121 aa6.26□□□□□ -1.41
COL1A1-209ENST00000495677 KRTAP5-9P26371 169 aa6.26□□□□□ -1.41
COL1A1-209ENST00000495677 UBE2V1Q13404 147 aa6.26□□□□□ -1.41
COL1A1-209ENST00000495677 C9orf118A6NHY6 69 aa6.25□□□□□ -1.41
COL1A1-209ENST00000495677 C9JAW5 83 aa6.25□□□□□ -1.41
COL1A1-209ENST00000495677 CCKP06307 115 aa6.25□□□□□ -1.41
COL1A1-209ENST00000495677 A0A1W2PPM0 123 aa6.24□□□□□ -1.41
COL1A1-209ENST00000495677 A6NN06 94 aa6.24□□□□□ -1.41
COL1A1-209ENST00000495677 DEFB116Q30KQ4 102 aa6.24□□□□□ -1.41
COL1A1-209ENST00000495677 DSCR8Q96T75 97 aa6.24□□□□□ -1.41
COL1A1-209ENST00000495677 RBM3P98179 157 aaKnown RBP6.23□□□□□ -1.41
COL1A1-209ENST00000495677 WFDC13Q8IUB5 93 aa6.22□□□□□ -1.41
COL1A1-209ENST00000495677 A0A1B0GVX0 72 aa6.21□□□□□ -1.42
COL1A1-209ENST00000495677 COL5A1-AS1Q5SY13 56 aa6.2□□□□□ -1.42
COL1A1-209ENST00000495677 C14orf132Q9NPU4 83 aa6.19□□□□□ -1.42
COL1A1-209ENST00000495677 SPCS1Q9Y6A9 102 aa6.19□□□□□ -1.42
COL1A1-209ENST00000495677 KRTAP2-3P0C7H8 128 aa6.18□□□□□ -1.42
COL1A1-209ENST00000495677 KRTAP2-4Q9BYR9 128 aa6.18□□□□□ -1.42
COL1A1-209ENST00000495677 H1FX-AS1Q4G0G2 97 aa6.17□□□□□ -1.42
COL1A1-209ENST00000495677 JMJD7-PLA2G4BH0Y9G9 81 aa6.16□□□□□ -1.42
COL1A1-209ENST00000495677 H3BT86 120 aa6.14□□□□□ -1.43
COL1A1-209ENST00000495677 MT1BP07438 61 aa6.14□□□□□ -1.43
COL1A1-209ENST00000495677 Q6ZQT0 140 aa6.14□□□□□ -1.43
COL1A1-209ENST00000495677 LOC110117498A0A087WWA1 95 aa6.12□□□□□ -1.43
COL1A1-209ENST00000495677 KRTAP10-5P60370 271 aa6.12□□□□□ -1.43
COL1A1-209ENST00000495677 KMT2DO14686 5537 aa6.11□□□□□ -1.43
COL1A1-209ENST00000495677 J3KT08 172 aa6.1□□□□□ -1.43
COL1A1-209ENST00000495677 K7EP34 96 aa6.1□□□□□ -1.43
COL1A1-209ENST00000495677 MDN1Q9NU22 5596 aa6.09□□□□□ -1.43
COL1A1-209ENST00000495677 PDE6GP18545 87 aa6.09□□□□□ -1.43
COL1A1-209ENST00000495677 KRTAP19-8Q3LI54 63 aa6.09□□□□□ -1.43
COL1A1-209ENST00000495677 Q5VV11 94 aa6.09□□□□□ -1.43
COL1A1-209ENST00000495677 C21orf62-AS1Q17RA5 79 aa6.07□□□□□ -1.44
COL1A1-209ENST00000495677 IGKV3D-7A0A0C4DH55 119 aa6.06□□□□□ -1.44
COL1A1-209ENST00000495677 SMCPP49901 116 aaPredicted RBP6.06□□□□□ -1.44
COL1A1-209ENST00000495677 NDUFB1O75438 58 aa6.05□□□□□ -1.44
COL1A1-209ENST00000495677 GTF2H5Q6ZYL4 71 aa6.05□□□□□ -1.44
COL1A1-209ENST00000495677 SPRR2GQ9BYE4 73 aa6.05□□□□□ -1.44
COL1A1-209ENST00000495677 NREPQ16612 68 aa6.03□□□□□ -1.44
COL1A1-209ENST00000495677 C8orf17Q9NRJ1 99 aa6.03□□□□□ -1.44
COL1A1-209ENST00000495677 PRO0461Q9UI25 63 aa6.03□□□□□ -1.44
COL1A1-209ENST00000495677 A0A1B0GW54 56 aa6□□□□□ -1.45
COL1A1-209ENST00000495677 Q6ZVQ6 151 aa5.99□□□□□ -1.45
COL1A1-209ENST00000495677 FAM236AA0A1B0GUQ0 79 aa5.96□□□□□ -1.46
COL1A1-209ENST00000495677 FAM236BA0A1B0GV22 79 aa5.96□□□□□ -1.46
COL1A1-209ENST00000495677 KRTAP2-2Q9BYT5 123 aa5.96□□□□□ -1.46
COL1A1-209ENST00000495677 KRTAP2-1Q9BYU5 128 aa5.96□□□□□ -1.46
COL1A1-209ENST00000495677 BPY2O14599 106 aa5.95□□□□□ -1.46
COL1A1-209ENST00000495677 ETDBQ3ZM63 59 aa5.95□□□□□ -1.46
COL1A1-209ENST00000495677 F8W1H4 67 aa5.94□□□□□ -1.46
COL1A1-209ENST00000495677 K7EQZ3 153 aa5.94□□□□□ -1.46
COL1A1-209ENST00000495677 PRR15Q8IV56 129 aa5.93□□□□□ -1.46
COL1A1-209ENST00000495677 Q8N9L7 120 aa5.93□□□□□ -1.46
COL1A1-209ENST00000495677 MRPL34Q9BQ48 92 aaKnown RBP5.92□□□□□ -1.46
COL1A1-209ENST00000495677 MMP24-AS1A0A0U1RRL7 71 aa5.91□□□□□ -1.46
COL1A1-209ENST00000495677 SPRR2EP22531 72 aa5.91□□□□□ -1.46
COL1A1-209ENST00000495677 SPRR2BP35325 72 aa5.91□□□□□ -1.46
COL1A1-209ENST00000495677 SPRR2AP35326 72 aa5.91□□□□□ -1.46
COL1A1-209ENST00000495677 TMEM254Q8TBM7 123 aa5.91□□□□□ -1.46
COL1A1-209ENST00000495677 UBL5Q9BZL1 73 aa5.91□□□□□ -1.46
COL1A1-209ENST00000495677 A0A1B0GV90 55 aa5.89□□□□□ -1.47
COL1A1-209ENST00000495677 NDUFS5O43920 106 aa5.89□□□□□ -1.47
COL1A1-209ENST00000495677 C5orf47Q569G3 176 aa5.89□□□□□ -1.47
COL1A1-209ENST00000495677 C7orf65Q6ZTY9 151 aa5.89□□□□□ -1.47
COL1A1-209ENST00000495677 SPRR2FQ96RM1 72 aa5.88□□□□□ -1.47
COL1A1-209ENST00000495677 hDV103S1A0JD37 113 aa5.87□□□□□ -1.47
COL1A1-209ENST00000495677 IGKV2D-30A0A075B6S6 120 aa5.86□□□□□ -1.47
COL1A1-209ENST00000495677 IGKV2-30P06310 120 aa5.86□□□□□ -1.47
COL1A1-209ENST00000495677 KLKP1Q107X0 134 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms