RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484		Q96NJ1	140 aa		5.27	□□□□□ -1.57
PCDH15-223	ENST00000495484	IGKV4-1	P06312	121 aa		5.26	□□□□□ -1.57
PCDH15-223	ENST00000495484	C1orf195	Q5TG92	126 aa		5.26	□□□□□ -1.57
PCDH15-223	ENST00000495484	NDUFB1	O75438	58 aa		5.26	□□□□□ -1.57
PCDH15-223	ENST00000495484	DEFB116	Q30KQ4	102 aa		5.26	□□□□□ -1.57
PCDH15-223	ENST00000495484	IGKV3D-7	A0A0C4DH55	119 aa		5.24	□□□□□ -1.57
PCDH15-223	ENST00000495484		A8MWP4	228 aa		5.24	□□□□□ -1.57
PCDH15-223	ENST00000495484	IMUP	Q9GZP8	106 aa		5.24	□□□□□ -1.57
PCDH15-223	ENST00000495484	DSCR10	P59022	87 aa		5.24	□□□□□ -1.57
PCDH15-223	ENST00000495484	MT-ATP8	P03928	68 aa		5.22	□□□□□ -1.57
PCDH15-223	ENST00000495484	DMBT1	Q9UGM3	2413 aa	Predicted RBP	5.22	□□□□□ -1.57
PCDH15-223	ENST00000495484	PRR15	Q8IV56	129 aa		5.22	□□□□□ -1.57
PCDH15-223	ENST00000495484	HIST1H4A	P62805	103 aa	Known RBP	5.21	□□□□□ -1.58
PCDH15-223	ENST00000495484	FP248	Q71RG6	208 aa	Predicted RBP	5.21	□□□□□ -1.58
PCDH15-223	ENST00000495484		A0A1B0GVX0	72 aa		5.2	□□□□□ -1.58
PCDH15-223	ENST00000495484		K7EQZ3	153 aa		5.2	□□□□□ -1.58
PCDH15-223	ENST00000495484		Q8N9L7	120 aa		5.19	□□□□□ -1.58
PCDH15-223	ENST00000495484	IGHV6-1	A0A0B4J1U7	121 aa		5.18	□□□□□ -1.58
PCDH15-223	ENST00000495484	RETNLB	Q9BQ08	111 aa		5.18	□□□□□ -1.58
PCDH15-223	ENST00000495484	C8orf87	E5RJ46	101 aa		5.17	□□□□□ -1.58
PCDH15-223	ENST00000495484	LCE2C	Q5TA81	110 aa		5.17	□□□□□ -1.58
PCDH15-223	ENST00000495484	LCE3B	Q5TA77	95 aa		5.17	□□□□□ -1.58
PCDH15-223	ENST00000495484	PCLO	Q9Y6V0	5065 aa		5.16	□□□□□ -1.58
PCDH15-223	ENST00000495484	LINC00313	P59037	77 aa		5.15	□□□□□ -1.58
PCDH15-223	ENST00000495484	C8orf17	Q9NRJ1	99 aa		5.15	□□□□□ -1.58
PCDH15-223	ENST00000495484	IGLV7-46	A0A075B6I9	117 aa		5.15	□□□□□ -1.59
PCDH15-223	ENST00000495484	HCG22	E2RYF7	251 aa		5.15	□□□□□ -1.59
PCDH15-223	ENST00000495484		A0A087WVE0	104 aa		5.14	□□□□□ -1.59
PCDH15-223	ENST00000495484	PRR4	Q16378	134 aa		5.13	□□□□□ -1.59
PCDH15-223	ENST00000495484	hDV103S1	A0JD37	113 aa		5.13	□□□□□ -1.59
PCDH15-223	ENST00000495484	CASC2	Q6XLA1	102 aa		5.13	□□□□□ -1.59
PCDH15-223	ENST00000495484	MMP24-AS1	A0A0U1RRL7	71 aa		5.12	□□□□□ -1.59
PCDH15-223	ENST00000495484	SCGB1A1	P11684	91 aa		5.11	□□□□□ -1.59
PCDH15-223	ENST00000495484	TMEM254	Q8TBM7	123 aa		5.11	□□□□□ -1.59
PCDH15-223	ENST00000495484	KRTAP4-8	A0A0G2JLE6	195 aa		5.11	□□□□□ -1.59
PCDH15-223	ENST00000495484	WFDC13	Q8IUB5	93 aa		5.11	□□□□□ -1.59
PCDH15-223	ENST00000495484	NOTCH2NL	Q7Z3S9	236 aa		5.1	□□□□□ -1.59
PCDH15-223	ENST00000495484	MRPL34	Q9BQ48	92 aa	Known RBP	5.1	□□□□□ -1.59
PCDH15-223	ENST00000495484	FAM236A	A0A1B0GUQ0	79 aa		5.09	□□□□□ -1.59
PCDH15-223	ENST00000495484	FAM236B	A0A1B0GV22	79 aa		5.09	□□□□□ -1.59
PCDH15-223	ENST00000495484	C9orf92	A6NGG3	77 aa		5.09	□□□□□ -1.6
PCDH15-223	ENST00000495484	TPRXL	Q17RH7	258 aa		5.09	□□□□□ -1.6
PCDH15-223	ENST00000495484	KRTAP13-3	Q3SY46	172 aa		5.08	□□□□□ -1.6
PCDH15-223	ENST00000495484	LOR	P23490	312 aa	Predicted RBP	5.07	□□□□□ -1.6
PCDH15-223	ENST00000495484	KRTAP16-1	A8MUX0	517 aa		5.07	□□□□□ -1.6
PCDH15-223	ENST00000495484	ATOX1	O00244	68 aa		5.07	□□□□□ -1.6
PCDH15-223	ENST00000495484	SMIM20	Q8N5G0	67 aa		5.07	□□□□□ -1.6
PCDH15-223	ENST00000495484		Q8N9P0	234 aa	Predicted RBP	5.06	□□□□□ -1.6
PCDH15-223	ENST00000495484	TP53AIP1	Q9HCN2	124 aa		5.06	□□□□□ -1.6
PCDH15-223	ENST00000495484	NDUFS5	O43920	106 aa		5.05	□□□□□ -1.6
PCDH15-223	ENST00000495484	KRTAP9-9	Q9BYP9	154 aa		5.05	□□□□□ -1.6
PCDH15-223	ENST00000495484	KRTAP9-4	Q9BYQ2	154 aa		5.05	□□□□□ -1.6
PCDH15-223	ENST00000495484	C20orf166-AS1	Q96NR2	134 aa		5.04	□□□□□ -1.6
PCDH15-223	ENST00000495484		A8MUU9	505 aa		5.03	□□□□□ -1.6
PCDH15-223	ENST00000495484		Q75L30	129 aa		5.03	□□□□□ -1.6
PCDH15-223	ENST00000495484	UQCRQ	O14949	82 aa		5.02	□□□□□ -1.61
PCDH15-223	ENST00000495484	C5orf47	Q569G3	176 aa		5.02	□□□□□ -1.61
PCDH15-223	ENST00000495484	OCR1	Q9BZK8	76 aa		5.02	□□□□□ -1.61
PCDH15-223	ENST00000495484	HERC1	Q15751	4861 aa		5.02	□□□□□ -1.61
PCDH15-223	ENST00000495484	TRAV7	A0A075B6U4	112 aa		5	□□□□□ -1.61
PCDH15-223	ENST00000495484	RPL37	P61927	97 aa	Known RBP	4.98	□□□□□ -1.61
PCDH15-223	ENST00000495484	ATP11AUN	Q6ZP68	121 aa		4.98	□□□□□ -1.61
PCDH15-223	ENST00000495484	SERP2	Q8N6R1	65 aa		4.98	□□□□□ -1.61
PCDH15-223	ENST00000495484	ANAPC13	Q9BS18	74 aa		4.98	□□□□□ -1.61
PCDH15-223	ENST00000495484	KRTAP4-7	Q9BYR0	210 aa		4.98	□□□□□ -1.61
PCDH15-223	ENST00000495484	ZCCHC13	Q8WW36	166 aa	Known RBP	4.97	□□□□□ -1.61
PCDH15-223	ENST00000495484	TRAV22	A0A0B4J277	110 aa		4.96	□□□□□ -1.61
PCDH15-223	ENST00000495484	MP68	P56378	58 aa		4.96	□□□□□ -1.61
PCDH15-223	ENST00000495484	HMCN2	Q8NDA2	5059 aa		4.96	□□□□□ -1.61
PCDH15-223	ENST00000495484		H3BPC8	53 aa		4.94	□□□□□ -1.62
PCDH15-223	ENST00000495484	COX7C	P15954	63 aa		4.94	□□□□□ -1.62
PCDH15-223	ENST00000495484	KRTAP4-12	Q9BQ66	201 aa		4.94	□□□□□ -1.62
PCDH15-223	ENST00000495484	KRTAP9-8	Q9BYQ0	159 aa		4.94	□□□□□ -1.62
PCDH15-223	ENST00000495484		H0Y9P7	68 aa		4.94	□□□□□ -1.62
PCDH15-223	ENST00000495484		Q5W150	140 aa		4.94	□□□□□ -1.62
PCDH15-223	ENST00000495484	SEC61B	P60468	96 aa	Known RBP	4.93	□□□□□ -1.62
PCDH15-223	ENST00000495484	LPA	P08519	4548 aa		4.93	□□□□□ -1.62
PCDH15-223	ENST00000495484	LOC101927531	A0A1B0GV80	90 aa		4.9	□□□□□ -1.62
PCDH15-223	ENST00000495484	LINC00208	Q96KT6	92 aa		4.9	□□□□□ -1.62
PCDH15-223	ENST00000495484	LRP2	P98164	4655 aa		4.9	□□□□□ -1.62
PCDH15-223	ENST00000495484	C1orf64	Q8NEQ6	169 aa		4.9	□□□□□ -1.63
PCDH15-223	ENST00000495484	PCOTH	Q58A44	107 aa		4.89	□□□□□ -1.63
PCDH15-223	ENST00000495484	C20orf197	Q8N268	126 aa		4.88	□□□□□ -1.63
PCDH15-223	ENST00000495484		A0A0U1RQV1	116 aa		4.87	□□□□□ -1.63
PCDH15-223	ENST00000495484	IGKV2-30	P06310	120 aa		4.87	□□□□□ -1.63
PCDH15-223	ENST00000495484	KLKP1	Q107X0	134 aa		4.87	□□□□□ -1.63
PCDH15-223	ENST00000495484	C7orf65	Q6ZTY9	151 aa		4.87	□□□□□ -1.63
PCDH15-223	ENST00000495484	IGKV2D-30	A0A075B6S6	120 aa		4.86	□□□□□ -1.63
PCDH15-223	ENST00000495484	SEC61G	P60059	68 aa		4.86	□□□□□ -1.63
PCDH15-223	ENST00000495484	KRTAP5-3	Q6L8H2	238 aa		4.86	□□□□□ -1.63
PCDH15-223	ENST00000495484	CYP4F30P	Q9H0H9	118 aa		4.86	□□□□□ -1.63
PCDH15-223	ENST00000495484	SPINK7	P58062	85 aa		4.85	□□□□□ -1.63
PCDH15-223	ENST00000495484	NDUFC1	O43677	76 aa		4.84	□□□□□ -1.63
PCDH15-223	ENST00000495484	SNURF	Q9Y675	71 aa		4.84	□□□□□ -1.63
PCDH15-223	ENST00000495484	CCDC179	H3BU77	68 aa		4.83	□□□□□ -1.64
PCDH15-223	ENST00000495484	MUC17	Q685J3	4493 aa		4.82	□□□□□ -1.64
PCDH15-223	ENST00000495484	LCE1D	Q5T752	114 aa		4.81	□□□□□ -1.64
PCDH15-223	ENST00000495484		H7BZZ5	65 aa		4.76	□□□□□ -1.65
PCDH15-223	ENST00000495484	HRES1	P13985	223 aa		4.76	□□□□□ -1.65
PCDH15-223	ENST00000495484	SPANXA2-OT1	Q8N9U9	137 aa		4.75	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms