RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 KRTAP13-3Q3SY46 172 aa9.15□□□□□ -0.95
SDF4-207ENST00000494748 WWC2-AS2Q96NR7 200 aa9.15□□□□□ -0.95
SDF4-207ENST00000494748 Q6ZRN7 208 aaPredicted RBP9.14□□□□□ -0.95
SDF4-207ENST00000494748 MRPL34Q9BQ48 92 aaKnown RBP9.14□□□□□ -0.95
SDF4-207ENST00000494748 RBM12B-AS1Q9P1G2 102 aa9.14□□□□□ -0.95
SDF4-207ENST00000494748 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.14□□□□□ -0.95
SDF4-207ENST00000494748 SPACA4Q8TDM5 124 aa9.13□□□□□ -0.95
SDF4-207ENST00000494748 Q5W150 140 aa9.1□□□□□ -0.95
SDF4-207ENST00000494748 SPINK6Q6UWN8 80 aa9.1□□□□□ -0.95
SDF4-207ENST00000494748 VPS13DQ5THJ4 4388 aa9.09□□□□□ -0.95
SDF4-207ENST00000494748 CDK2AP2O75956 126 aa9.09□□□□□ -0.95
SDF4-207ENST00000494748 DNAH17Q9UFH2 4485 aa9.08□□□□□ -0.96
SDF4-207ENST00000494748 ANAPC11Q9NYG5 84 aa9.07□□□□□ -0.96
SDF4-207ENST00000494748 PRR26Q8N8Z3 221 aa9.05□□□□□ -0.96
SDF4-207ENST00000494748 FBN3Q75N90 2809 aa9.05□□□□□ -0.96
SDF4-207ENST00000494748 STARD9Q9P2P6 4700 aa9.04□□□□□ -0.96
SDF4-207ENST00000494748 NBDYA0A0U1RRE5 68 aa9.04□□□□□ -0.96
SDF4-207ENST00000494748 C7orf65Q6ZTY9 151 aa9.04□□□□□ -0.96
SDF4-207ENST00000494748 PRKDCP78527 4128 aaKnown RBP9.04□□□□□ -0.96
SDF4-207ENST00000494748 DNAH2Q9P225 4427 aa9.03□□□□□ -0.96
SDF4-207ENST00000494748 PSORS1C2Q9UIG4 136 aa9.02□□□□□ -0.96
SDF4-207ENST00000494748 C4orf48Q5BLP8 95 aa9.02□□□□□ -0.97
SDF4-207ENST00000494748 MDFIQ99750 246 aa9.02□□□□□ -0.97
SDF4-207ENST00000494748 RETNLBQ9BQ08 111 aa9.02□□□□□ -0.97
SDF4-207ENST00000494748 IGLV5-52A0A0A0MRZ9 124 aa9.01□□□□□ -0.97
SDF4-207ENST00000494748 ZNF706Q9Y5V0 76 aaPredicted RBP9.01□□□□□ -0.97
SDF4-207ENST00000494748 KMT2AQ03164 3969 aa8.98□□□□□ -0.97
SDF4-207ENST00000494748 ZNF861PO60384 105 aa8.96□□□□□ -0.98
SDF4-207ENST00000494748 DMAC1Q96GE9 116 aa8.94□□□□□ -0.98
SDF4-207ENST00000494748 A0A087WTM6 91 aa8.92□□□□□ -0.98
SDF4-207ENST00000494748 ACYP2P14621 99 aa8.92□□□□□ -0.98
SDF4-207ENST00000494748 RTL8CO15255 209 aa8.88□□□□□ -0.99
SDF4-207ENST00000494748 DNAH6Q9C0G6 4158 aa8.88□□□□□ -0.99
SDF4-207ENST00000494748 LINC00313P59037 77 aa8.87□□□□□ -0.99
SDF4-207ENST00000494748 DNAH11Q96DT5 4516 aa8.87□□□□□ -0.99
SDF4-207ENST00000494748 DMBT1Q9UGM3 2413 aaPredicted RBP8.86□□□□□ -0.99
SDF4-207ENST00000494748 C8orf87E5RJ46 101 aa8.84□□□□□ -0.99
SDF4-207ENST00000494748 H3BS24 57 aa8.84□□□□□ -0.99
SDF4-207ENST00000494748 CIRBP-AS1Q8TBR5 109 aa8.84□□□□□ -0.99
SDF4-207ENST00000494748 ADM2Q7Z4H4 148 aa8.82□□□□□ -1
SDF4-207ENST00000494748 PRAC1Q96KF2 57 aa8.82□□□□□ -1
SDF4-207ENST00000494748 IGLV7-43P04211 117 aa8.82□□□□□ -1
SDF4-207ENST00000494748 IGKV2-30P06310 120 aa8.82□□□□□ -1
SDF4-207ENST00000494748 SPATA8Q6RVD6 105 aa8.81□□□□□ -1
SDF4-207ENST00000494748 DNAH5Q8TE73 4624 aa8.81□□□□□ -1
SDF4-207ENST00000494748 MEGF8Q7Z7M0 2845 aa8.81□□□□□ -1
SDF4-207ENST00000494748 NUPR2A6NF83 97 aa8.8□□□□□ -1
SDF4-207ENST00000494748 PLA2G1BP04054 148 aaKnown RBP8.8□□□□□ -1
SDF4-207ENST00000494748 KRTAP16-1A8MUX0 517 aa8.79□□□□□ -1
SDF4-207ENST00000494748 FAM229AH3BQW9 127 aa8.78□□□□□ -1
SDF4-207ENST00000494748 A0A1B0GU69 56 aa8.77□□□□□ -1
SDF4-207ENST00000494748 FLG2Q5D862 2391 aaPredicted RBP8.77□□□□□ -1
SDF4-207ENST00000494748 TGP01266 2768 aa8.77□□□□□ -1.01
SDF4-207ENST00000494748 SSBP3-AS1Q7Z2R9 100 aa8.76□□□□□ -1.01
SDF4-207ENST00000494748 SPINK1P00995 79 aa8.74□□□□□ -1.01
SDF4-207ENST00000494748 KRTAP13-2Q52LG2 175 aa8.72□□□□□ -1.01
SDF4-207ENST00000494748 MIR22HGQ0VDD5 57 aa8.68□□□□□ -1.02
SDF4-207ENST00000494748 LRP1BQ9NZR2 4599 aa8.68□□□□□ -1.02
SDF4-207ENST00000494748 PKD1P98161 4303 aa8.67□□□□□ -1.02
SDF4-207ENST00000494748 UQCR11O14957 56 aa8.66□□□□□ -1.02
SDF4-207ENST00000494748 IGKV2D-30A0A075B6S6 120 aa8.65□□□□□ -1.02
SDF4-207ENST00000494748 VPS13BQ7Z7G8 4022 aa8.61□□□□□ -1.03
SDF4-207ENST00000494748 LINC01554Q52M75 96 aa8.59□□□□□ -1.03
SDF4-207ENST00000494748 KRTAP1-4P0C5Y4 121 aa8.57□□□□□ -1.04
SDF4-207ENST00000494748 C1orf134Q5TEV5 83 aa8.56□□□□□ -1.04
SDF4-207ENST00000494748 KRTAP10-2P60368 255 aa8.55□□□□□ -1.04
SDF4-207ENST00000494748 FAT2Q9NYQ8 4349 aa8.55□□□□□ -1.04
SDF4-207ENST00000494748 CSAG1Q6PB30 78 aa8.51□□□□□ -1.05
SDF4-207ENST00000494748 Q6ZSA8 131 aa8.49□□□□□ -1.05
SDF4-207ENST00000494748 Q8N1X5 172 aa8.46□□□□□ -1.05
SDF4-207ENST00000494748 LY6G6CO95867 125 aa8.46□□□□□ -1.06
SDF4-207ENST00000494748 HYDINQ4G0P3 5121 aa8.46□□□□□ -1.06
SDF4-207ENST00000494748 KRTAP10-1P60331 282 aa8.44□□□□□ -1.06
SDF4-207ENST00000494748 H0YAA0 97 aa8.43□□□□□ -1.06
SDF4-207ENST00000494748 SACSQ9NZJ4 4579 aa8.41□□□□□ -1.06
SDF4-207ENST00000494748 A8MUU9 505 aa8.39□□□□□ -1.07
SDF4-207ENST00000494748 TYMSOSQ8TAI1 123 aa8.38□□□□□ -1.07
SDF4-207ENST00000494748 KRTAP3-1Q9BYR8 98 aa8.36□□□□□ -1.07
SDF4-207ENST00000494748 DNHD1Q96M86 4753 aa8.34□□□□□ -1.07
SDF4-207ENST00000494748 CRIPTQ9P021 101 aa8.34□□□□□ -1.07
SDF4-207ENST00000494748 PKHD1L1Q86WI1 4243 aa8.33□□□□□ -1.08
SDF4-207ENST00000494748 LINC00304Q8N9R0 145 aa8.31□□□□□ -1.08
SDF4-207ENST00000494748 PKHD1P08F94 4074 aa8.3□□□□□ -1.08
SDF4-207ENST00000494748 RPS29P62273 56 aaKnown RBP8.25□□□□□ -1.09
SDF4-207ENST00000494748 KRTAP25-1Q3LHN0 102 aa8.25□□□□□ -1.09
SDF4-207ENST00000494748 C20orf166-AS1Q96NR2 134 aa8.24□□□□□ -1.09
SDF4-207ENST00000494748 A0A1B0GU33 70 aa8.24□□□□□ -1.09
SDF4-207ENST00000494748 H1FX-AS1Q4G0G2 97 aa8.24□□□□□ -1.09
SDF4-207ENST00000494748 C9orf92A6NGG3 77 aa8.21□□□□□ -1.09
SDF4-207ENST00000494748 APOBP04114 4563 aaKnown RBP8.2□□□□□ -1.1
SDF4-207ENST00000494748 KRTAP21-3Q3LHN1 58 aa8.14□□□□□ -1.11
SDF4-207ENST00000494748 SMR3BP02814 79 aaPredicted RBP8.12□□□□□ -1.11
SDF4-207ENST00000494748 COX6B2Q6YFQ2 88 aa8.1□□□□□ -1.11
SDF4-207ENST00000494748 DYNC1H1Q14204 4646 aaKnown RBP8.1□□□□□ -1.11
SDF4-207ENST00000494748 ROMO1P60602 79 aa8.09□□□□□ -1.11
SDF4-207ENST00000494748 FAT1Q14517 4588 aa8.07□□□□□ -1.12
SDF4-207ENST00000494748 K7ERS5 55 aa8.05□□□□□ -1.12
SDF4-207ENST00000494748 A0A0D9SG42 100 aa8.04□□□□□ -1.12
SDF4-207ENST00000494748 KRTAP10-4P60372 401 aaPredicted RBP8.03□□□□□ -1.12
SDF4-207ENST00000494748 KRTAP10-6P60371 365 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms