RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 S100A1P23297 94 aa4.72□□□□□ -1.65
UBR4-216ENST00000494503 LYRM7Q5U5X0 104 aa4.72□□□□□ -1.65
UBR4-216ENST00000494503 CEND1Q8N111 149 aa4.72□□□□□ -1.65
UBR4-216ENST00000494503 MPLKIPQ8TAP9 179 aa4.72□□□□□ -1.65
UBR4-216ENST00000494503 HIGD1BQ9P298 99 aa4.71□□□□□ -1.66
UBR4-216ENST00000494503 C8orf87E5RJ46 101 aa4.7□□□□□ -1.66
UBR4-216ENST00000494503 TMEM256-PLSCR3K7ERE1 68 aa4.7□□□□□ -1.66
UBR4-216ENST00000494503 VAMP8Q9BV40 100 aa4.7□□□□□ -1.66
UBR4-216ENST00000494503 LINC00472Q9H8W2 130 aa4.7□□□□□ -1.66
UBR4-216ENST00000494503 MACF1Q9UPN3 7388 aaKnown RBP4.7□□□□□ -1.66
UBR4-216ENST00000494503 A0A1B0GVX0 72 aa4.69□□□□□ -1.66
UBR4-216ENST00000494503 H3BQ85 93 aa4.69□□□□□ -1.66
UBR4-216ENST00000494503 FXYD2P54710 66 aa4.69□□□□□ -1.66
UBR4-216ENST00000494503 SPINK7P58062 85 aa4.69□□□□□ -1.66
UBR4-216ENST00000494503 C2orf91Q6ZV80 131 aa4.69□□□□□ -1.66
UBR4-216ENST00000494503 ZCCHC13Q8WW36 166 aaKnown RBP4.69□□□□□ -1.66
UBR4-216ENST00000494503 COX6CP09669 75 aa4.68□□□□□ -1.66
UBR4-216ENST00000494503 K7ERJ3 54 aa4.67□□□□□ -1.66
UBR4-216ENST00000494503 WFDC13Q8IUB5 93 aa4.67□□□□□ -1.66
UBR4-216ENST00000494503 Q8N9P0 234 aaPredicted RBP4.67□□□□□ -1.66
UBR4-216ENST00000494503 A8MWP4 228 aa4.66□□□□□ -1.66
UBR4-216ENST00000494503 DSCR8Q96T75 97 aa4.66□□□□□ -1.66
UBR4-216ENST00000494503 NDUFB1O75438 58 aa4.64□□□□□ -1.67
UBR4-216ENST00000494503 RBM3P98179 157 aaKnown RBP4.64□□□□□ -1.67
UBR4-216ENST00000494503 J3KT08 172 aa4.63□□□□□ -1.67
UBR4-216ENST00000494503 SCGB1C2P0DMR2 95 aa4.63□□□□□ -1.67
UBR4-216ENST00000494503 UBE2V1Q13404 147 aa4.63□□□□□ -1.67
UBR4-216ENST00000494503 KRTAP19-6Q3LI70 58 aa4.63□□□□□ -1.67
UBR4-216ENST00000494503 C9JAW5 83 aa4.61□□□□□ -1.67
UBR4-216ENST00000494503 HSD52Q0P140 79 aa4.61□□□□□ -1.67
UBR4-216ENST00000494503 C8orf17Q9NRJ1 99 aa4.58□□□□□ -1.68
UBR4-216ENST00000494503 Q6ZQT0 140 aa4.57□□□□□ -1.68
UBR4-216ENST00000494503 IGKV3D-7A0A0C4DH55 119 aa4.56□□□□□ -1.68
UBR4-216ENST00000494503 NDUFS5O43920 106 aa4.56□□□□□ -1.68
UBR4-216ENST00000494503 BAALC-AS2P0C853 105 aa4.56□□□□□ -1.68
UBR4-216ENST00000494503 Q6ZVQ6 151 aa4.56□□□□□ -1.68
UBR4-216ENST00000494503 KRTAP6-3Q3LI67 103 aa4.54□□□□□ -1.68
UBR4-216ENST00000494503 H1FX-AS1Q4G0G2 97 aa4.54□□□□□ -1.68
UBR4-216ENST00000494503 IGKV2D-30A0A075B6S6 120 aa4.52□□□□□ -1.69
UBR4-216ENST00000494503 IGKV2-30P06310 120 aa4.52□□□□□ -1.69
UBR4-216ENST00000494503 UQCR10Q9UDW1 63 aa4.51□□□□□ -1.69
UBR4-216ENST00000494503 JMJD7-PLA2G4BH0Y9G9 81 aa4.5□□□□□ -1.69
UBR4-216ENST00000494503 ATXN8Q156A1 80 aa4.5□□□□□ -1.69
UBR4-216ENST00000494503 NREPQ16612 68 aa4.5□□□□□ -1.69
UBR4-216ENST00000494503 MRPL34Q9BQ48 92 aaKnown RBP4.5□□□□□ -1.69
UBR4-216ENST00000494503 C14orf132Q9NPU4 83 aa4.5□□□□□ -1.69
UBR4-216ENST00000494503 FAM236AA0A1B0GUQ0 79 aa4.49□□□□□ -1.69
UBR4-216ENST00000494503 FAM236BA0A1B0GV22 79 aa4.49□□□□□ -1.69
UBR4-216ENST00000494503 PYY3Q5JQD4 70 aa4.49□□□□□ -1.69
UBR4-216ENST00000494503 PRR15Q8IV56 129 aa4.49□□□□□ -1.69
UBR4-216ENST00000494503 TMEM254Q8TBM7 123 aa4.48□□□□□ -1.69
UBR4-216ENST00000494503 NAA38Q9BRA0 125 aaKnown RBP4.48□□□□□ -1.69
UBR4-216ENST00000494503 LOC110117498A0A087WWA1 95 aa4.47□□□□□ -1.69
UBR4-216ENST00000494503 MMP24-AS1A0A0U1RRL7 71 aa4.47□□□□□ -1.69
UBR4-216ENST00000494503 hDV103S1A0JD37 113 aa4.47□□□□□ -1.69
UBR4-216ENST00000494503 A0A1B0GW54 56 aa4.46□□□□□ -1.7
UBR4-216ENST00000494503 PDE6GP18545 87 aa4.46□□□□□ -1.7
UBR4-216ENST00000494503 C7orf65Q6ZTY9 151 aa4.46□□□□□ -1.7
UBR4-216ENST00000494503 A6NN06 94 aa4.45□□□□□ -1.7
UBR4-216ENST00000494503 K7EQZ3 153 aa4.45□□□□□ -1.7
UBR4-216ENST00000494503 C5orf47Q569G3 176 aa4.44□□□□□ -1.7
UBR4-216ENST00000494503 C4orf26Q17RF5 130 aa4.43□□□□□ -1.7
UBR4-216ENST00000494503 NEBP20929 6669 aa4.41□□□□□ -1.7
UBR4-216ENST00000494503 M0R143 59 aa4.4□□□□□ -1.71
UBR4-216ENST00000494503 BPY2O14599 106 aa4.4□□□□□ -1.71
UBR4-216ENST00000494503 Q5VV11 94 aa4.4□□□□□ -1.71
UBR4-216ENST00000494503 Q5W150 140 aa4.4□□□□□ -1.71
UBR4-216ENST00000494503 HCG22E2RYF7 251 aa4.39□□□□□ -1.71
UBR4-216ENST00000494503 CASC2Q6XLA1 102 aa4.38□□□□□ -1.71
UBR4-216ENST00000494503 Q8N9L7 120 aa4.37□□□□□ -1.71
UBR4-216ENST00000494503 S4R3F8 94 aa4.37□□□□□ -1.71
UBR4-216ENST00000494503 TSTD3H0UI37 97 aa4.36□□□□□ -1.71
UBR4-216ENST00000494503 KRTAP20-1Q3LI63 56 aa4.36□□□□□ -1.71
UBR4-216ENST00000494503 IMUPQ9GZP8 106 aa4.36□□□□□ -1.71
UBR4-216ENST00000494503 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
UBR4-216ENST00000494503 BATFQ16520 125 aa4.34□□□□□ -1.71
UBR4-216ENST00000494503 CSAG1Q6PB30 78 aa4.34□□□□□ -1.71
UBR4-216ENST00000494503 MT1BP07438 61 aa4.33□□□□□ -1.72
UBR4-216ENST00000494503 CXCL6P80162 114 aa4.33□□□□□ -1.72
UBR4-216ENST00000494503 LCA10Q71F78 164 aa4.31□□□□□ -1.72
UBR4-216ENST00000494503 C1orf64Q8NEQ6 169 aa4.31□□□□□ -1.72
UBR4-216ENST00000494503 PCP4P48539 62 aa4.3□□□□□ -1.72
UBR4-216ENST00000494503 H3BT86 120 aa4.29□□□□□ -1.72
UBR4-216ENST00000494503 KRTAP10-5P60370 271 aa4.29□□□□□ -1.72
UBR4-216ENST00000494503 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
UBR4-216ENST00000494503 KRTAP19-8Q3LI54 63 aa4.28□□□□□ -1.72
UBR4-216ENST00000494503 KLKP1Q107X0 134 aa4.27□□□□□ -1.73
UBR4-216ENST00000494503 KRTAP3-1Q9BYR8 98 aa4.26□□□□□ -1.73
UBR4-216ENST00000494503 UBL5Q9BZL1 73 aa4.24□□□□□ -1.73
UBR4-216ENST00000494503 KRTAP5-9P26371 169 aa4.23□□□□□ -1.73
UBR4-216ENST00000494503 A0A1W2PPM0 123 aa4.22□□□□□ -1.73
UBR4-216ENST00000494503 C9orf118A6NHY6 69 aa4.22□□□□□ -1.73
UBR4-216ENST00000494503 KMT2DO14686 5537 aa4.21□□□□□ -1.73
UBR4-216ENST00000494503 MDN1Q9NU22 5596 aa4.19□□□□□ -1.74
UBR4-216ENST00000494503 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
UBR4-216ENST00000494503 TP53AIP1Q9HCN2 124 aa4.18□□□□□ -1.74
UBR4-216ENST00000494503 CRIPTQ9P021 101 aa4.18□□□□□ -1.74
UBR4-216ENST00000494503 SPCS1Q9Y6A9 102 aa4.18□□□□□ -1.74
UBR4-216ENST00000494503 TAX1BP3O14907 124 aa4.17□□□□□ -1.74
UBR4-216ENST00000494503 SMIM6P0DI80 62 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms