RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 KMT2CQ8NEZ4 4911 aaKnown RBP2.32□□□□□ -2.04
SNX13-210ENST00000494402 ABRACLQ9P1F3 81 aa2.31□□□□□ -2.04
SNX13-210ENST00000494402 CHD7Q9P2D1 2997 aa2.31□□□□□ -2.04
SNX13-210ENST00000494402 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.31□□□□□ -2.04
SNX13-210ENST00000494402 DMXL2Q8TDJ6 3036 aa2.31□□□□□ -2.04
SNX13-210ENST00000494402 LRBAP50851 2863 aa2.3□□□□□ -2.04
SNX13-210ENST00000494402 KRTAP5-5Q701N2 237 aaPredicted RBP2.3□□□□□ -2.04
SNX13-210ENST00000494402 H0YGX0 51 aa2.29□□□□□ -2.04
SNX13-210ENST00000494402 SPRR1AP35321 89 aa2.29□□□□□ -2.04
SNX13-210ENST00000494402 ZANQ9Y493 2812 aa2.28□□□□□ -2.04
SNX13-210ENST00000494402 SMIM27A0A1W2PRY6 76 aa2.28□□□□□ -2.04
SNX13-210ENST00000494402 LAMA5O15230 3695 aa2.28□□□□□ -2.04
SNX13-210ENST00000494402 RYR2Q92736 4967 aa2.27□□□□□ -2.05
SNX13-210ENST00000494402 SPENQ96T58 3664 aaKnown RBP2.27□□□□□ -2.05
SNX13-210ENST00000494402 MUC2Q02817 5179 aa2.27□□□□□ -2.05
SNX13-210ENST00000494402 APLNQ9ULZ1 77 aa2.26□□□□□ -2.05
SNX13-210ENST00000494402 HIVEP1P15822 2718 aa2.26□□□□□ -2.05
SNX13-210ENST00000494402 NBASA2RRP1 2371 aa2.25□□□□□ -2.05
SNX13-210ENST00000494402 MGAM2Q2M2H8 2515 aa2.25□□□□□ -2.05
SNX13-210ENST00000494402 LINC00158P58513 81 aa2.25□□□□□ -2.05
SNX13-210ENST00000494402 PRRC2CQ9Y520 2896 aaKnown RBP2.24□□□□□ -2.05
SNX13-210ENST00000494402 BSNQ9UPA5 3926 aa2.24□□□□□ -2.05
SNX13-210ENST00000494402 PRB3Q04118 309 aaPredicted RBP2.24□□□□□ -2.05
SNX13-210ENST00000494402 WNK1Q9H4A3 2382 aa2.24□□□□□ -2.05
SNX13-210ENST00000494402 PLCE1Q9P212 2302 aa2.24□□□□□ -2.05
SNX13-210ENST00000494402 ADGRG4Q8IZF6 3080 aa2.23□□□□□ -2.05
SNX13-210ENST00000494402 CSPG4Q6UVK1 2322 aa2.23□□□□□ -2.05
SNX13-210ENST00000494402 OTOGQ6ZRI0 2925 aa2.23□□□□□ -2.05
SNX13-210ENST00000494402 LYNX1G3V0Z9 82 aa2.23□□□□□ -2.05
SNX13-210ENST00000494402 SPRR1BP22528 89 aa2.23□□□□□ -2.05
SNX13-210ENST00000494402 DEFB105AQ8NG35 78 aa2.23□□□□□ -2.05
SNX13-210ENST00000494402 H1FX-AS1Q4G0G2 97 aa2.22□□□□□ -2.05
SNX13-210ENST00000494402 AKAP13Q12802 2813 aa2.22□□□□□ -2.05
SNX13-210ENST00000494402 CENPEQ02224 2701 aa2.21□□□□□ -2.06
SNX13-210ENST00000494402 LINC01546A6NGU7 62 aa2.21□□□□□ -2.06
SNX13-210ENST00000494402 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
SNX13-210ENST00000494402 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
SNX13-210ENST00000494402 LELP1Q5T871 98 aa2.21□□□□□ -2.06
SNX13-210ENST00000494402 TOGARAM1Q9Y4F4 1720 aa2.21□□□□□ -2.06
SNX13-210ENST00000494402 TENM3Q9P273 2699 aa2.2□□□□□ -2.06
SNX13-210ENST00000494402 ATMQ13315 3056 aa2.2□□□□□ -2.06
SNX13-210ENST00000494402 FAM208AQ9UK61 1670 aaKnown RBP2.2□□□□□ -2.06
SNX13-210ENST00000494402 DCHS2Q6V1P9 2916 aa2.2□□□□□ -2.06
SNX13-210ENST00000494402 HERC2O95714 4834 aa2.19□□□□□ -2.06
SNX13-210ENST00000494402 H0YAA0 97 aa2.19□□□□□ -2.06
SNX13-210ENST00000494402 TMEM167BQ9NRX6 74 aa2.19□□□□□ -2.06
SNX13-210ENST00000494402 NSD1Q96L73 2696 aaPredicted RBP2.19□□□□□ -2.06
SNX13-210ENST00000494402 TENM2Q9NT68 2774 aa2.19□□□□□ -2.06
SNX13-210ENST00000494402 C4AP0C0L4 1744 aa2.18□□□□□ -2.06
SNX13-210ENST00000494402 C4BP0C0L5 1744 aa2.18□□□□□ -2.06
SNX13-210ENST00000494402 CLTCL1P53675 1640 aa2.17□□□□□ -2.06
SNX13-210ENST00000494402 USF3Q68DE3 2245 aa2.17□□□□□ -2.06
SNX13-210ENST00000494402 MEGF8Q7Z7M0 2845 aa2.17□□□□□ -2.06
SNX13-210ENST00000494402 MXRA5Q9NR99 2828 aa2.17□□□□□ -2.06
SNX13-210ENST00000494402 WFDC13Q8IUB5 93 aa2.16□□□□□ -2.06
SNX13-210ENST00000494402 CSMD2Q7Z408 3487 aa2.15□□□□□ -2.06
SNX13-210ENST00000494402 LOC730098B7Z3J9 87 aa2.15□□□□□ -2.07
SNX13-210ENST00000494402 APCP25054 2843 aa2.15□□□□□ -2.07
SNX13-210ENST00000494402 CHD9Q3L8U1 2897 aa2.15□□□□□ -2.07
SNX13-210ENST00000494402 SPTBN1Q01082 2364 aaKnown RBP2.14□□□□□ -2.07
SNX13-210ENST00000494402 MINOS1Q5TGZ0 78 aa2.14□□□□□ -2.07
SNX13-210ENST00000494402 MGAQ8IWI9 3026 aa2.14□□□□□ -2.07
SNX13-210ENST00000494402 HERC1Q15751 4861 aa2.13□□□□□ -2.07
SNX13-210ENST00000494402 TIMM8BQ9Y5J9 83 aaPredicted RBP2.13□□□□□ -2.07
SNX13-210ENST00000494402 CUBNO60494 3623 aa2.13□□□□□ -2.07
SNX13-210ENST00000494402 ABCA13Q86UQ4 5058 aa2.12□□□□□ -2.07
SNX13-210ENST00000494402 FSIP2Q5CZC0 6907 aa2.12□□□□□ -2.07
SNX13-210ENST00000494402 LAMA1P25391 3075 aa2.12□□□□□ -2.07
SNX13-210ENST00000494402 ACANP16112 2415 aa2.11□□□□□ -2.07
SNX13-210ENST00000494402 LINC00308Q8TCZ7 52 aa2.11□□□□□ -2.07
SNX13-210ENST00000494402 SONP18583 2426 aaKnown RBP2.11□□□□□ -2.07
SNX13-210ENST00000494402 TRPM2O94759 1503 aa2.11□□□□□ -2.07
SNX13-210ENST00000494402 SPINK4O60575 86 aa2.1□□□□□ -2.07
SNX13-210ENST00000494402 DDX60Q8IY21 1712 aaKnown RBP2.08□□□□□ -2.08
SNX13-210ENST00000494402 KLK9Q2XQG4 91 aa2.08□□□□□ -2.08
SNX13-210ENST00000494402 C6orf48Q9UBA6 75 aa2.08□□□□□ -2.08
SNX13-210ENST00000494402 ACACAQ13085 2346 aa2.08□□□□□ -2.08
SNX13-210ENST00000494402 IAPPP10997 89 aa2.07□□□□□ -2.08
SNX13-210ENST00000494402 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
SNX13-210ENST00000494402 MAP1AP78559 2803 aaPredicted RBP2.06□□□□□ -2.08
SNX13-210ENST00000494402 CDC42BPAQ5VT25 1732 aa2.05□□□□□ -2.08
SNX13-210ENST00000494402 VPS13CQ709C8 3753 aa2.05□□□□□ -2.08
SNX13-210ENST00000494402 APC2O95996 2303 aa2.05□□□□□ -2.08
SNX13-210ENST00000494402 LMO7Q8WWI1 1683 aa2.04□□□□□ -2.08
SNX13-210ENST00000494402 AKAP9Q99996 3911 aa2.04□□□□□ -2.08
SNX13-210ENST00000494402 CRCT1Q9UGL9 99 aa2.04□□□□□ -2.08
SNX13-210ENST00000494402 SVEP1Q4LDE5 3571 aa2.04□□□□□ -2.08
SNX13-210ENST00000494402 DEFB130BP0DP73 79 aa2.03□□□□□ -2.08
SNX13-210ENST00000494402 DEFB130AP0DP74 79 aa2.03□□□□□ -2.08
SNX13-210ENST00000494402 FAT4Q6V0I7 4981 aa1.98□□□□□ -2.09
SNX13-210ENST00000494402 ALMS1Q8TCU4 4167 aa1.96□□□□□ -2.1
SNX13-210ENST00000494402 RPS27P42677 84 aaKnown RBP1.96□□□□□ -2.1
SNX13-210ENST00000494402 RPS27LQ71UM5 84 aaKnown RBP1.96□□□□□ -2.1
SNX13-210ENST00000494402 DMBT1Q9UGM3 2413 aaPredicted RBP1.96□□□□□ -2.1
SNX13-210ENST00000494402 WNK2Q9Y3S1 2297 aa1.95□□□□□ -2.1
SNX13-210ENST00000494402 DEFB109BQ30KR1 87 aa1.95□□□□□ -2.1
SNX13-210ENST00000494402 NEBP20929 6669 aa1.95□□□□□ -2.1
SNX13-210ENST00000494402 SMIM2Q9BVW6 85 aa1.93□□□□□ -2.1
SNX13-210ENST00000494402 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
SNX13-210ENST00000494402 TACC2O95359 2948 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms