RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 LINC01006Q8NI28 216 aa1.49□□□□□ -2.17
CDC42EP3-205ENST00000494083 DIRC1Q969H9 104 aa1.49□□□□□ -2.17
CDC42EP3-205ENST00000494083 CDC42SE1Q9NRR8 79 aa1.49□□□□□ -2.17
CDC42EP3-205ENST00000494083 ANKRD11Q6UB99 2663 aaPredicted RBP1.48□□□□□ -2.17
CDC42EP3-205ENST00000494083 LRCOL1A6NCL2 159 aa1.48□□□□□ -2.17
CDC42EP3-205ENST00000494083 HELZ2Q9BYK8 2649 aaKnown RBP1.48□□□□□ -2.17
CDC42EP3-205ENST00000494083 A0A1B0GVX0 72 aa1.48□□□□□ -2.17
CDC42EP3-205ENST00000494083 RPL37AP61513 92 aaKnown RBP1.48□□□□□ -2.17
CDC42EP3-205ENST00000494083 ATP11AUNQ6ZP68 121 aa1.48□□□□□ -2.17
CDC42EP3-205ENST00000494083 Q6ZRX8 168 aa1.48□□□□□ -2.17
CDC42EP3-205ENST00000494083 HERC1Q15751 4861 aa1.48□□□□□ -2.17
CDC42EP3-205ENST00000494083 TLN1Q9Y490 2541 aaKnown RBP1.48□□□□□ -2.17
CDC42EP3-205ENST00000494083 B4DSR2 109 aa1.48□□□□□ -2.17
CDC42EP3-205ENST00000494083 Q8N9L7 120 aa1.48□□□□□ -2.17
CDC42EP3-205ENST00000494083 HIVEP1P15822 2718 aa1.47□□□□□ -2.17
CDC42EP3-205ENST00000494083 MSMBP08118 114 aa1.47□□□□□ -2.17
CDC42EP3-205ENST00000494083 KRTAP5-5Q701N2 237 aaPredicted RBP1.47□□□□□ -2.17
CDC42EP3-205ENST00000494083 HIGD2AQ9BW72 106 aa1.47□□□□□ -2.17
CDC42EP3-205ENST00000494083 MOBPQ13875 183 aa1.47□□□□□ -2.17
CDC42EP3-205ENST00000494083 HMCN2Q8NDA2 5059 aa1.47□□□□□ -2.17
CDC42EP3-205ENST00000494083 TTC28Q96AY4 2481 aa1.47□□□□□ -2.17
CDC42EP3-205ENST00000494083 CMC4P56277 68 aaPredicted RBP1.46□□□□□ -2.17
CDC42EP3-205ENST00000494083 SPATA8Q6RVD6 105 aa1.46□□□□□ -2.17
CDC42EP3-205ENST00000494083 ST20-AS1Q8NBB2 130 aa1.46□□□□□ -2.17
CDC42EP3-205ENST00000494083 ANAPC11Q9NYG5 84 aa1.46□□□□□ -2.17
CDC42EP3-205ENST00000494083 WNK1Q9H4A3 2382 aa1.46□□□□□ -2.18
CDC42EP3-205ENST00000494083 CSPG4Q6UVK1 2322 aa1.46□□□□□ -2.18
CDC42EP3-205ENST00000494083 DEFB131BA0A096LNP1 70 aa1.46□□□□□ -2.18
CDC42EP3-205ENST00000494083 HCG22E2RYF7 251 aa1.46□□□□□ -2.18
CDC42EP3-205ENST00000494083 C9orf116Q5BN46 136 aaPredicted RBP1.46□□□□□ -2.18
CDC42EP3-205ENST00000494083 NOP10Q9NPE3 64 aaKnown RBP1.46□□□□□ -2.18
CDC42EP3-205ENST00000494083 DEFB136Q30KP8 78 aa1.45□□□□□ -2.18
CDC42EP3-205ENST00000494083 LELP1Q5T871 98 aa1.45□□□□□ -2.18
CDC42EP3-205ENST00000494083 RIF1Q5UIP0 2472 aaKnown RBP1.45□□□□□ -2.18
CDC42EP3-205ENST00000494083 LINC00269Q8N2A0 174 aa1.45□□□□□ -2.18
CDC42EP3-205ENST00000494083 A0A096LPF7 62 aa1.45□□□□□ -2.18
CDC42EP3-205ENST00000494083 K7EQZ3 153 aa1.45□□□□□ -2.18
CDC42EP3-205ENST00000494083 PRB2P02812 416 aaPredicted RBP1.45□□□□□ -2.18
CDC42EP3-205ENST00000494083 HIGD2BQ4VC39 106 aa1.45□□□□□ -2.18
CDC42EP3-205ENST00000494083 KRTAP5-2Q701N4 177 aa1.45□□□□□ -2.18
CDC42EP3-205ENST00000494083 SPG11Q96JI7 2443 aa1.45□□□□□ -2.18
CDC42EP3-205ENST00000494083 ETDCA0A1B0GVM5 59 aa1.44□□□□□ -2.18
CDC42EP3-205ENST00000494083 A8MWP4 228 aa1.44□□□□□ -2.18
CDC42EP3-205ENST00000494083 DMAC1Q96GE9 116 aa1.44□□□□□ -2.18
CDC42EP3-205ENST00000494083 LIMD2Q9BT23 127 aa1.44□□□□□ -2.18
CDC42EP3-205ENST00000494083 IGLV10-54A0A075B6I4 117 aa1.44□□□□□ -2.18
CDC42EP3-205ENST00000494083 DEFB113Q30KQ7 82 aa1.44□□□□□ -2.18
CDC42EP3-205ENST00000494083 SPTSSBQ8NFR3 76 aa1.44□□□□□ -2.18
CDC42EP3-205ENST00000494083 KLK12Q9UKR0 248 aa1.44□□□□□ -2.18
CDC42EP3-205ENST00000494083 A6NED7 52 aa1.44□□□□□ -2.18
CDC42EP3-205ENST00000494083 CHKB-CPT1BH3BT56 60 aa1.44□□□□□ -2.18
CDC42EP3-205ENST00000494083 MYO9AB2RTY4 2548 aa1.44□□□□□ -2.18
CDC42EP3-205ENST00000494083 UNC79Q9P2D8 2635 aa1.43□□□□□ -2.18
CDC42EP3-205ENST00000494083 JMJD1CQ15652 2540 aa1.43□□□□□ -2.18
CDC42EP3-205ENST00000494083 LINC01556Q5JQF7 62 aa1.43□□□□□ -2.18
CDC42EP3-205ENST00000494083 IGFL1Q6UW32 110 aa1.43□□□□□ -2.18
CDC42EP3-205ENST00000494083 Q6ZRN7 208 aaPredicted RBP1.43□□□□□ -2.18
CDC42EP3-205ENST00000494083 CEP295Q9C0D2 2601 aa1.43□□□□□ -2.18
CDC42EP3-205ENST00000494083 TLN2Q9Y4G6 2542 aa1.43□□□□□ -2.18
CDC42EP3-205ENST00000494083 NDUFB1O75438 58 aa1.43□□□□□ -2.18
CDC42EP3-205ENST00000494083 UNQ6190/PRO20217Q6UXQ8 127 aa1.43□□□□□ -2.18
CDC42EP3-205ENST00000494083 CIRBP-AS1Q8TBR5 109 aa1.43□□□□□ -2.18
CDC42EP3-205ENST00000494083 APCP25054 2843 aa1.43□□□□□ -2.18
CDC42EP3-205ENST00000494083 ANGP03950 147 aaKnown RBP1.43□□□□□ -2.18
CDC42EP3-205ENST00000494083 DEFB130BP0DP73 79 aa1.43□□□□□ -2.18
CDC42EP3-205ENST00000494083 DEFB130AP0DP74 79 aa1.43□□□□□ -2.18
CDC42EP3-205ENST00000494083 SPAG11BQ08648 103 aa1.43□□□□□ -2.18
CDC42EP3-205ENST00000494083 TEX15Q9BXT5 2789 aa1.43□□□□□ -2.18
CDC42EP3-205ENST00000494083 FAM168BA1KXE4 195 aa1.42□□□□□ -2.18
CDC42EP3-205ENST00000494083 HRES1P13985 223 aa1.42□□□□□ -2.18
CDC42EP3-205ENST00000494083 FN1P02751 2386 aaKnown RBP1.42□□□□□ -2.18
CDC42EP3-205ENST00000494083 A0A087WSZ3 146 aa1.42□□□□□ -2.18
CDC42EP3-205ENST00000494083 PRR15LQ9BU68 103 aa1.42□□□□□ -2.18
CDC42EP3-205ENST00000494083 SSPOA2VEC9 5147 aa1.42□□□□□ -2.18
CDC42EP3-205ENST00000494083 DEFB105AQ8NG35 78 aa1.42□□□□□ -2.18
CDC42EP3-205ENST00000494083 USP9YO00507 2555 aaPredicted RBP1.42□□□□□ -2.18
CDC42EP3-205ENST00000494083 RETNLBQ9BQ08 111 aa1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 WFDC10AQ9H1F0 79 aa1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 PRO0255Q9UI72 69 aa1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 FAT4Q6V0I7 4981 aa1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 HIVEP3Q5T1R4 2406 aa1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 SONP18583 2426 aaKnown RBP1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 A8MUU9 505 aa1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 IGLV7-43P04211 117 aa1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 LINC00208Q96KT6 92 aa1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 LCE3DQ9BYE3 92 aa1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 ZFYVE26Q68DK2 2539 aa1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 USP9XQ93008 2570 aaPredicted RBP1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 IGKV2-24A0A0C4DH68 120 aa1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 ZNF861PO60384 105 aa1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 CCL19Q99731 98 aa1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 MAST4O15021 2626 aa1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 ACACBO00763 2458 aa1.41□□□□□ -2.18
CDC42EP3-205ENST00000494083 ADM2Q7Z4H4 148 aa1.4□□□□□ -2.18
CDC42EP3-205ENST00000494083 SETD2Q9BYW2 2564 aaPredicted RBP1.4□□□□□ -2.18
CDC42EP3-205ENST00000494083 IGF2RP11717 2491 aa1.4□□□□□ -2.19
CDC42EP3-205ENST00000494083 DEFB116Q30KQ4 102 aa1.4□□□□□ -2.19
CDC42EP3-205ENST00000494083 C1orf137Q5JT78 98 aa1.4□□□□□ -2.19
CDC42EP3-205ENST00000494083 WFDC13Q8IUB5 93 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms