RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 Q5XG85 94 aa6.16□□□□□ -1.42
CLCN6-208ENST00000494028 ZCCHC13Q8WW36 166 aaKnown RBP6.16□□□□□ -1.42
CLCN6-208ENST00000494028 KIAA1109Q2LD37 5005 aa6.16□□□□□ -1.42
CLCN6-208ENST00000494028 IGHV6-1A0A0B4J1U7 121 aa6.15□□□□□ -1.42
CLCN6-208ENST00000494028 hDV103S1A0JD37 113 aa6.15□□□□□ -1.42
CLCN6-208ENST00000494028 CDK2AP2O75956 126 aa6.15□□□□□ -1.42
CLCN6-208ENST00000494028 SMR3BP02814 79 aaPredicted RBP6.15□□□□□ -1.42
CLCN6-208ENST00000494028 RYR1P21817 5038 aa6.15□□□□□ -1.43
CLCN6-208ENST00000494028 NDUFC1O43677 76 aa6.14□□□□□ -1.43
CLCN6-208ENST00000494028 PKHD1L1Q86WI1 4243 aa6.14□□□□□ -1.43
CLCN6-208ENST00000494028 NOTCH2NLQ7Z3S9 236 aa6.12□□□□□ -1.43
CLCN6-208ENST00000494028 TYMSOSQ8TAI1 123 aa6.12□□□□□ -1.43
CLCN6-208ENST00000494028 LIMD2Q9BT23 127 aa6.12□□□□□ -1.43
CLCN6-208ENST00000494028 KRTAP17-1Q9BYP8 105 aa6.12□□□□□ -1.43
CLCN6-208ENST00000494028 PLA2G1BP04054 148 aaKnown RBP6.11□□□□□ -1.43
CLCN6-208ENST00000494028 C5orf47Q569G3 176 aa6.11□□□□□ -1.43
CLCN6-208ENST00000494028 C1orf195Q5TG92 126 aa6.11□□□□□ -1.43
CLCN6-208ENST00000494028 C8orf87E5RJ46 101 aa6.1□□□□□ -1.43
CLCN6-208ENST00000494028 H0Y9P7 68 aa6.1□□□□□ -1.43
CLCN6-208ENST00000494028 PRR26Q8N8Z3 221 aa6.1□□□□□ -1.43
CLCN6-208ENST00000494028 MRPL34Q9BQ48 92 aaKnown RBP6.1□□□□□ -1.43
CLCN6-208ENST00000494028 ATP5EP56381 51 aaPredicted RBP6.09□□□□□ -1.43
CLCN6-208ENST00000494028 HSPG2P98160 4391 aa6.08□□□□□ -1.44
CLCN6-208ENST00000494028 TRAV22A0A0B4J277 110 aa6.08□□□□□ -1.44
CLCN6-208ENST00000494028 OXTP01178 125 aa6.08□□□□□ -1.44
CLCN6-208ENST00000494028 HERC2O95714 4834 aa6.08□□□□□ -1.44
CLCN6-208ENST00000494028 H3BPC8 53 aa6.07□□□□□ -1.44
CLCN6-208ENST00000494028 MP68P56378 58 aa6.07□□□□□ -1.44
CLCN6-208ENST00000494028 LINC00304Q8N9R0 145 aa6.07□□□□□ -1.44
CLCN6-208ENST00000494028 SPINK1P00995 79 aa6.06□□□□□ -1.44
CLCN6-208ENST00000494028 RPS29P62273 56 aaKnown RBP6.06□□□□□ -1.44
CLCN6-208ENST00000494028 TP53AIP1Q9HCN2 124 aa6.06□□□□□ -1.44
CLCN6-208ENST00000494028 FAT1Q14517 4588 aa6.06□□□□□ -1.44
CLCN6-208ENST00000494028 LINC00208Q96KT6 92 aa6.05□□□□□ -1.44
CLCN6-208ENST00000494028 RPS28P62857 69 aaKnown RBP6.04□□□□□ -1.44
CLCN6-208ENST00000494028 C4orf48Q5BLP8 95 aa6.04□□□□□ -1.44
CLCN6-208ENST00000494028 KRTAP16-1A8MUX0 517 aa6.03□□□□□ -1.44
CLCN6-208ENST00000494028 NDUFS5O43920 106 aa6.03□□□□□ -1.44
CLCN6-208ENST00000494028 SERP1Q9Y6X1 66 aa6.03□□□□□ -1.44
CLCN6-208ENST00000494028 KRTAP13-3Q3SY46 172 aa6.02□□□□□ -1.45
CLCN6-208ENST00000494028 SPAG11AQ6PDA7 123 aa6.02□□□□□ -1.45
CLCN6-208ENST00000494028 LINC00313P59037 77 aa6□□□□□ -1.45
CLCN6-208ENST00000494028 C1orf64Q8NEQ6 169 aa6□□□□□ -1.45
CLCN6-208ENST00000494028 Q5VSD8 79 aa5.99□□□□□ -1.45
CLCN6-208ENST00000494028 Q8N9P0 234 aaPredicted RBP5.98□□□□□ -1.45
CLCN6-208ENST00000494028 FAM229AH3BQW9 127 aa5.97□□□□□ -1.45
CLCN6-208ENST00000494028 CYP4F30PQ9H0H9 118 aa5.97□□□□□ -1.45
CLCN6-208ENST00000494028 Q5W150 140 aa5.96□□□□□ -1.46
CLCN6-208ENST00000494028 SPANXA2-OT1Q8N9U9 137 aa5.95□□□□□ -1.46
CLCN6-208ENST00000494028 KRTAP4-5Q9BYR2 181 aa5.95□□□□□ -1.46
CLCN6-208ENST00000494028 ABCA13Q86UQ4 5058 aa5.95□□□□□ -1.46
CLCN6-208ENST00000494028 LOC101927531A0A1B0GV80 90 aa5.94□□□□□ -1.46
CLCN6-208ENST00000494028 PRR4Q16378 134 aa5.93□□□□□ -1.46
CLCN6-208ENST00000494028 PCOTHQ58A44 107 aa5.92□□□□□ -1.46
CLCN6-208ENST00000494028 FLG2Q5D862 2391 aaPredicted RBP5.91□□□□□ -1.46
CLCN6-208ENST00000494028 Q8N1X5 172 aa5.91□□□□□ -1.46
CLCN6-208ENST00000494028 KRTAP10-8P60410 259 aa5.89□□□□□ -1.47
CLCN6-208ENST00000494028 IGLV7-46A0A075B6I9 117 aa5.88□□□□□ -1.47
CLCN6-208ENST00000494028 IGKV2-30P06310 120 aa5.88□□□□□ -1.47
CLCN6-208ENST00000494028 RETNLBQ9BQ08 111 aa5.88□□□□□ -1.47
CLCN6-208ENST00000494028 SMIM26A0A096LP01 95 aa5.87□□□□□ -1.47
CLCN6-208ENST00000494028 TNXBP22105 4242 aa5.87□□□□□ -1.47
CLCN6-208ENST00000494028 FP248Q71RG6 208 aaPredicted RBP5.86□□□□□ -1.47
CLCN6-208ENST00000494028 FAT3Q8TDW7 4589 aa5.86□□□□□ -1.47
CLCN6-208ENST00000494028 PCLOQ9Y6V0 5065 aa5.85□□□□□ -1.47
CLCN6-208ENST00000494028 C9orf92A6NGG3 77 aa5.83□□□□□ -1.48
CLCN6-208ENST00000494028 A8MUU9 505 aa5.83□□□□□ -1.48
CLCN6-208ENST00000494028 C20orf166-AS1Q96NR2 134 aa5.83□□□□□ -1.48
CLCN6-208ENST00000494028 LRP1Q07954 4544 aaKnown RBP5.82□□□□□ -1.48
CLCN6-208ENST00000494028 MT1HL1P0DM35 61 aa5.81□□□□□ -1.48
CLCN6-208ENST00000494028 COA5Q86WW8 74 aa5.81□□□□□ -1.48
CLCN6-208ENST00000494028 HRES1P13985 223 aa5.8□□□□□ -1.48
CLCN6-208ENST00000494028 MYCBP2O75592 4640 aa5.79□□□□□ -1.48
CLCN6-208ENST00000494028 IGKV2D-30A0A075B6S6 120 aa5.79□□□□□ -1.48
CLCN6-208ENST00000494028 LCE2BO14633 110 aa5.79□□□□□ -1.48
CLCN6-208ENST00000494028 C4orf26Q17RF5 130 aa5.77□□□□□ -1.49
CLCN6-208ENST00000494028 C7orf65Q6ZTY9 151 aa5.76□□□□□ -1.49
CLCN6-208ENST00000494028 DMAC1Q96GE9 116 aa5.76□□□□□ -1.49
CLCN6-208ENST00000494028 MPLKIPQ8TAP9 179 aa5.75□□□□□ -1.49
CLCN6-208ENST00000494028 Q75L30 129 aa5.74□□□□□ -1.49
CLCN6-208ENST00000494028 Q1T7F1 81 aa5.71□□□□□ -1.5
CLCN6-208ENST00000494028 ACYP2P14621 99 aa5.67□□□□□ -1.5
CLCN6-208ENST00000494028 RPL37P61927 97 aaKnown RBP5.67□□□□□ -1.5
CLCN6-208ENST00000494028 XP32Q5T750 250 aa5.67□□□□□ -1.5
CLCN6-208ENST00000494028 V9GYY9 64 aa5.65□□□□□ -1.5
CLCN6-208ENST00000494028 DMBT1Q9UGM3 2413 aaPredicted RBP5.64□□□□□ -1.51
CLCN6-208ENST00000494028 SPINK7P58062 85 aa5.62□□□□□ -1.51
CLCN6-208ENST00000494028 A8MUN3 132 aa5.61□□□□□ -1.51
CLCN6-208ENST00000494028 CHKB-CPT1BH3BT56 60 aa5.61□□□□□ -1.51
CLCN6-208ENST00000494028 PSPHP1O15172 72 aa5.61□□□□□ -1.51
CLCN6-208ENST00000494028 Q5VV11 94 aa5.61□□□□□ -1.51
CLCN6-208ENST00000494028 LINC01558Q9Y6Z2 57 aa5.61□□□□□ -1.51
CLCN6-208ENST00000494028 PRR15LQ9BU68 103 aa5.6□□□□□ -1.51
CLCN6-208ENST00000494028 HERC1Q15751 4861 aa5.59□□□□□ -1.51
CLCN6-208ENST00000494028 TPRXLQ17RH7 258 aa5.59□□□□□ -1.51
CLCN6-208ENST00000494028 ATP11AUNQ6ZP68 121 aa5.58□□□□□ -1.52
CLCN6-208ENST00000494028 KRTAP3-1Q9BYR8 98 aa5.56□□□□□ -1.52
CLCN6-208ENST00000494028 J3QL48 77 aa5.53□□□□□ -1.52
CLCN6-208ENST00000494028 COX6B2Q6YFQ2 88 aa5.53□□□□□ -1.52
CLCN6-208ENST00000494028 HMCN2Q8NDA2 5059 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms