RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 CXCL6P80162 114 aa3.69□□□□□ -1.82
CPSF7-213ENST00000494016 HAMPP81172 84 aa3.69□□□□□ -1.82
CPSF7-213ENST00000494016 LINC00474Q9P2X8 69 aa3.69□□□□□ -1.82
CPSF7-213ENST00000494016 IGLV8-61A0A075B6I0 122 aa3.68□□□□□ -1.82
CPSF7-213ENST00000494016 A0A1B0GW54 56 aa3.68□□□□□ -1.82
CPSF7-213ENST00000494016 SPRR1BP22528 89 aa3.68□□□□□ -1.82
CPSF7-213ENST00000494016 C1orf137Q5JT78 98 aa3.68□□□□□ -1.82
CPSF7-213ENST00000494016 KRTAP13-1Q8IUC0 172 aa3.68□□□□□ -1.82
CPSF7-213ENST00000494016 SPACA4Q8TDM5 124 aa3.68□□□□□ -1.82
CPSF7-213ENST00000494016 SPRR4Q96PI1 79 aa3.68□□□□□ -1.82
CPSF7-213ENST00000494016 HERC1Q15751 4861 aa3.68□□□□□ -1.82
CPSF7-213ENST00000494016 A0A0G2JQZ4 141 aa3.67□□□□□ -1.82
CPSF7-213ENST00000494016 ATOX1O00244 68 aa3.67□□□□□ -1.82
CPSF7-213ENST00000494016 BCE1O60756 84 aa3.67□□□□□ -1.82
CPSF7-213ENST00000494016 COX7CP15954 63 aa3.67□□□□□ -1.82
CPSF7-213ENST00000494016 NREPQ16612 68 aa3.67□□□□□ -1.82
CPSF7-213ENST00000494016 C1orf134Q5TEV5 83 aa3.67□□□□□ -1.82
CPSF7-213ENST00000494016 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
CPSF7-213ENST00000494016 Q8NBF4 154 aa3.67□□□□□ -1.82
CPSF7-213ENST00000494016 DPH3Q96FX2 82 aa3.67□□□□□ -1.82
CPSF7-213ENST00000494016 RTL8CO15255 209 aa3.66□□□□□ -1.82
CPSF7-213ENST00000494016 IGFL1Q6UW32 110 aa3.66□□□□□ -1.82
CPSF7-213ENST00000494016 SCXQ7RTU7 201 aa3.66□□□□□ -1.82
CPSF7-213ENST00000494016 HIGD2AQ9BW72 106 aa3.66□□□□□ -1.82
CPSF7-213ENST00000494016 SRRM2Q9UQ35 2752 aaKnown RBP3.65□□□□□ -1.82
CPSF7-213ENST00000494016 UQCRQO14949 82 aa3.65□□□□□ -1.83
CPSF7-213ENST00000494016 CRYGAP11844 174 aa3.65□□□□□ -1.83
CPSF7-213ENST00000494016 SERP2Q8N6R1 65 aa3.65□□□□□ -1.83
CPSF7-213ENST00000494016 PLAC8Q9NZF1 115 aa3.65□□□□□ -1.83
CPSF7-213ENST00000494016 IGKV4-1P06312 121 aa3.64□□□□□ -1.83
CPSF7-213ENST00000494016 UBE2AP49459 152 aa3.64□□□□□ -1.83
CPSF7-213ENST00000494016 DNAH5Q8TE73 4624 aa3.63□□□□□ -1.83
CPSF7-213ENST00000494016 BPY2O14599 106 aa3.63□□□□□ -1.83
CPSF7-213ENST00000494016 PRR4Q16378 134 aa3.63□□□□□ -1.83
CPSF7-213ENST00000494016 Q8N9L7 120 aa3.63□□□□□ -1.83
CPSF7-213ENST00000494016 UBR4Q5T4S7 5183 aa3.63□□□□□ -1.83
CPSF7-213ENST00000494016 LRP1BQ9NZR2 4599 aa3.62□□□□□ -1.83
CPSF7-213ENST00000494016 F8WEM9 126 aa3.62□□□□□ -1.83
CPSF7-213ENST00000494016 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
CPSF7-213ENST00000494016 DSCR10P59022 87 aa3.62□□□□□ -1.83
CPSF7-213ENST00000494016 C9orf153Q5TBE3 101 aa3.62□□□□□ -1.83
CPSF7-213ENST00000494016 HRCT1Q6UXD1 115 aa3.62□□□□□ -1.83
CPSF7-213ENST00000494016 CYSTM1Q9H1C7 97 aa3.62□□□□□ -1.83
CPSF7-213ENST00000494016 PSORS1C2Q9UIG4 136 aa3.62□□□□□ -1.83
CPSF7-213ENST00000494016 HSPG2P98160 4391 aa3.62□□□□□ -1.83
CPSF7-213ENST00000494016 TRAV7A0A075B6U4 112 aa3.61□□□□□ -1.83
CPSF7-213ENST00000494016 LINC00483Q53H64 154 aa3.61□□□□□ -1.83
CPSF7-213ENST00000494016 APOBP04114 4563 aaKnown RBP3.61□□□□□ -1.83
CPSF7-213ENST00000494016 A0A1B0GVY2 172 aa3.6□□□□□ -1.83
CPSF7-213ENST00000494016 ZNF861PO60384 105 aa3.6□□□□□ -1.83
CPSF7-213ENST00000494016 ZNF706Q9Y5V0 76 aaPredicted RBP3.6□□□□□ -1.83
CPSF7-213ENST00000494016 A0A087WSZ3 146 aa3.59□□□□□ -1.83
CPSF7-213ENST00000494016 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
CPSF7-213ENST00000494016 LINC00313P59037 77 aa3.58□□□□□ -1.84
CPSF7-213ENST00000494016 KRTAP10-1P60331 282 aa3.58□□□□□ -1.84
CPSF7-213ENST00000494016 DEFB116Q30KQ4 102 aa3.58□□□□□ -1.84
CPSF7-213ENST00000494016 LINC00472Q9H8W2 130 aa3.58□□□□□ -1.84
CPSF7-213ENST00000494016 ANAPC11Q9NYG5 84 aa3.58□□□□□ -1.84
CPSF7-213ENST00000494016 IGLV7-43P04211 117 aa3.57□□□□□ -1.84
CPSF7-213ENST00000494016 CIRBP-AS1Q8TBR5 109 aa3.57□□□□□ -1.84
CPSF7-213ENST00000494016 A8MUN3 132 aa3.56□□□□□ -1.84
CPSF7-213ENST00000494016 K7EQZ3 153 aa3.56□□□□□ -1.84
CPSF7-213ENST00000494016 RPL37AP61513 92 aaKnown RBP3.56□□□□□ -1.84
CPSF7-213ENST00000494016 Q6ZSA8 131 aa3.56□□□□□ -1.84
CPSF7-213ENST00000494016 C20orf197Q8N268 126 aa3.56□□□□□ -1.84
CPSF7-213ENST00000494016 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
CPSF7-213ENST00000494016 KRTAP16-1A8MUX0 517 aa3.55□□□□□ -1.84
CPSF7-213ENST00000494016 PRR15Q8IV56 129 aa3.55□□□□□ -1.84
CPSF7-213ENST00000494016 Q96NJ1 140 aa3.55□□□□□ -1.84
CPSF7-213ENST00000494016 KLKP1Q107X0 134 aa3.54□□□□□ -1.84
CPSF7-213ENST00000494016 MOBPQ13875 183 aa3.54□□□□□ -1.84
CPSF7-213ENST00000494016 Q5XG85 94 aa3.54□□□□□ -1.84
CPSF7-213ENST00000494016 SNURFQ9Y675 71 aa3.54□□□□□ -1.84
CPSF7-213ENST00000494016 HCG22E2RYF7 251 aa3.53□□□□□ -1.84
CPSF7-213ENST00000494016 H7BZZ5 65 aa3.53□□□□□ -1.84
CPSF7-213ENST00000494016 LCA10Q71F78 164 aa3.53□□□□□ -1.84
CPSF7-213ENST00000494016 CAMK2N1Q7Z7J9 78 aa3.53□□□□□ -1.84
CPSF7-213ENST00000494016 KTN1-AS1Q86SY8 53 aa3.53□□□□□ -1.84
CPSF7-213ENST00000494016 A8MWP4 228 aa3.52□□□□□ -1.85
CPSF7-213ENST00000494016 TMEM258P61165 79 aa3.52□□□□□ -1.85
CPSF7-213ENST00000494016 DMBT1Q9UGM3 2413 aaPredicted RBP3.52□□□□□ -1.85
CPSF7-213ENST00000494016 FAT1Q14517 4588 aa3.51□□□□□ -1.85
CPSF7-213ENST00000494016 TMEM254Q8TBM7 123 aa3.51□□□□□ -1.85
CPSF7-213ENST00000494016 VPS13BQ7Z7G8 4022 aa3.5□□□□□ -1.85
CPSF7-213ENST00000494016 SSBP3-AS1Q7Z2R9 100 aa3.5□□□□□ -1.85
CPSF7-213ENST00000494016 WFDC13Q8IUB5 93 aa3.5□□□□□ -1.85
CPSF7-213ENST00000494016 MMP24-AS1A0A0U1RRL7 71 aa3.49□□□□□ -1.85
CPSF7-213ENST00000494016 NDUFC1O43677 76 aa3.49□□□□□ -1.85
CPSF7-213ENST00000494016 ASB16-AS1Q495Z4 193 aa3.49□□□□□ -1.85
CPSF7-213ENST00000494016 KRTAP13-2Q52LG2 175 aa3.49□□□□□ -1.85
CPSF7-213ENST00000494016 CASC2Q6XLA1 102 aa3.49□□□□□ -1.85
CPSF7-213ENST00000494016 ZCCHC13Q8WW36 166 aaKnown RBP3.49□□□□□ -1.85
CPSF7-213ENST00000494016 IGLV7-46A0A075B6I9 117 aa3.48□□□□□ -1.85
CPSF7-213ENST00000494016 MYCBP2O75592 4640 aa3.47□□□□□ -1.85
CPSF7-213ENST00000494016 A0A087X002 238 aa3.47□□□□□ -1.85
CPSF7-213ENST00000494016 NDUFB1O75438 58 aa3.47□□□□□ -1.85
CPSF7-213ENST00000494016 KRTAP1-4P0C5Y4 121 aa3.47□□□□□ -1.85
CPSF7-213ENST00000494016 FAM229BQ4G0N7 80 aa3.47□□□□□ -1.85
CPSF7-213ENST00000494016 BRK1Q8WUW1 75 aa3.47□□□□□ -1.85
CPSF7-213ENST00000494016 C8orf17Q9NRJ1 99 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms