RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 OCR1Q9BZK8 76 aa5.97□□□□□ -1.45
PRPF3-206ENST00000493553 DNAH2Q9P225 4427 aa5.96□□□□□ -1.46
PRPF3-206ENST00000493553 ASB16-AS1Q495Z4 193 aa5.96□□□□□ -1.46
PRPF3-206ENST00000493553 C5orf47Q569G3 176 aa5.96□□□□□ -1.46
PRPF3-206ENST00000493553 HECTD4Q9Y4D8 3996 aa5.96□□□□□ -1.46
PRPF3-206ENST00000493553 A0A0G2JQZ4 141 aa5.95□□□□□ -1.46
PRPF3-206ENST00000493553 KMT2AQ03164 3969 aa5.94□□□□□ -1.46
PRPF3-206ENST00000493553 ATP5EP56381 51 aaPredicted RBP5.94□□□□□ -1.46
PRPF3-206ENST00000493553 Q5XG85 94 aa5.94□□□□□ -1.46
PRPF3-206ENST00000493553 CASC2Q6XLA1 102 aa5.94□□□□□ -1.46
PRPF3-206ENST00000493553 TMEM254Q8TBM7 123 aa5.94□□□□□ -1.46
PRPF3-206ENST00000493553 H3BPC8 53 aa5.93□□□□□ -1.46
PRPF3-206ENST00000493553 SPINK6Q6UWN8 80 aa5.93□□□□□ -1.46
PRPF3-206ENST00000493553 MP68P56378 58 aa5.92□□□□□ -1.46
PRPF3-206ENST00000493553 LIMD2Q9BT23 127 aa5.92□□□□□ -1.46
PRPF3-206ENST00000493553 TP53AIP1Q9HCN2 124 aa5.92□□□□□ -1.46
PRPF3-206ENST00000493553 RPS28P62857 69 aaKnown RBP5.91□□□□□ -1.46
PRPF3-206ENST00000493553 KRTAP2-2Q9BYT5 123 aa5.91□□□□□ -1.46
PRPF3-206ENST00000493553 SRRM2Q9UQ35 2752 aaKnown RBP5.91□□□□□ -1.46
PRPF3-206ENST00000493553 A0A1B0GVX0 72 aa5.9□□□□□ -1.46
PRPF3-206ENST00000493553 DEFB116Q30KQ4 102 aa5.9□□□□□ -1.46
PRPF3-206ENST00000493553 A0A0U1RQV1 116 aa5.89□□□□□ -1.47
PRPF3-206ENST00000493553 A0A1B0GVY2 172 aa5.89□□□□□ -1.47
PRPF3-206ENST00000493553 hDV103S1A0JD37 113 aa5.89□□□□□ -1.47
PRPF3-206ENST00000493553 HRCT1Q6UXD1 115 aa5.89□□□□□ -1.47
PRPF3-206ENST00000493553 ANAPC11Q9NYG5 84 aa5.89□□□□□ -1.47
PRPF3-206ENST00000493553 C8orf87E5RJ46 101 aa5.88□□□□□ -1.47
PRPF3-206ENST00000493553 SPAG11AQ6PDA7 123 aa5.88□□□□□ -1.47
PRPF3-206ENST00000493553 WFDC13Q8IUB5 93 aa5.88□□□□□ -1.47
PRPF3-206ENST00000493553 Q96NJ1 140 aa5.88□□□□□ -1.47
PRPF3-206ENST00000493553 C8orf17Q9NRJ1 99 aa5.87□□□□□ -1.47
PRPF3-206ENST00000493553 MMP24-AS1A0A0U1RRL7 71 aa5.86□□□□□ -1.47
PRPF3-206ENST00000493553 FAM236DA0A1B0GTK5 79 aa5.86□□□□□ -1.47
PRPF3-206ENST00000493553 H7BZZ5 65 aa5.86□□□□□ -1.47
PRPF3-206ENST00000493553 SPINK1P00995 79 aa5.86□□□□□ -1.47
PRPF3-206ENST00000493553 FAM236CP0DP71 79 aa5.86□□□□□ -1.47
PRPF3-206ENST00000493553 RPS29P62273 56 aaKnown RBP5.86□□□□□ -1.47
PRPF3-206ENST00000493553 DNAH8Q96JB1 4490 aa5.85□□□□□ -1.47
PRPF3-206ENST00000493553 SNURFQ9Y675 71 aa5.85□□□□□ -1.47
PRPF3-206ENST00000493553 KRTAP1-4P0C5Y4 121 aa5.84□□□□□ -1.47
PRPF3-206ENST00000493553 TYMSOSQ8TAI1 123 aa5.84□□□□□ -1.47
PRPF3-206ENST00000493553 DNAH11Q96DT5 4516 aa5.83□□□□□ -1.48
PRPF3-206ENST00000493553 IGHV6-1A0A0B4J1U7 121 aa5.83□□□□□ -1.48
PRPF3-206ENST00000493553 A0A087X002 238 aa5.82□□□□□ -1.48
PRPF3-206ENST00000493553 KRTAP13-2Q52LG2 175 aa5.82□□□□□ -1.48
PRPF3-206ENST00000493553 MRPL34Q9BQ48 92 aaKnown RBP5.82□□□□□ -1.48
PRPF3-206ENST00000493553 TRAV22A0A0B4J277 110 aa5.81□□□□□ -1.48
PRPF3-206ENST00000493553 ZCCHC13Q8WW36 166 aaKnown RBP5.81□□□□□ -1.48
PRPF3-206ENST00000493553 SERP1Q9Y6X1 66 aa5.81□□□□□ -1.48
PRPF3-206ENST00000493553 DNAH5Q8TE73 4624 aa5.81□□□□□ -1.48
PRPF3-206ENST00000493553 H0Y9P7 68 aa5.8□□□□□ -1.48
PRPF3-206ENST00000493553 CYSTM1Q9H1C7 97 aa5.8□□□□□ -1.48
PRPF3-206ENST00000493553 FRAS1Q86XX4 4008 aa5.8□□□□□ -1.48
PRPF3-206ENST00000493553 C1orf195Q5TG92 126 aa5.78□□□□□ -1.48
PRPF3-206ENST00000493553 LINC00304Q8N9R0 145 aa5.78□□□□□ -1.48
PRPF3-206ENST00000493553 FAT2Q9NYQ8 4349 aa5.78□□□□□ -1.48
PRPF3-206ENST00000493553 NDUFS5O43920 106 aa5.77□□□□□ -1.49
PRPF3-206ENST00000493553 LINC00313P59037 77 aa5.77□□□□□ -1.49
PRPF3-206ENST00000493553 SPANXA2-OT1Q8N9U9 137 aa5.77□□□□□ -1.49
PRPF3-206ENST00000493553 LINC00208Q96KT6 92 aa5.77□□□□□ -1.49
PRPF3-206ENST00000493553 PRR26Q8N8Z3 221 aa5.76□□□□□ -1.49
PRPF3-206ENST00000493553 C1orf64Q8NEQ6 169 aa5.76□□□□□ -1.49
PRPF3-206ENST00000493553 PKD1P98161 4303 aa5.75□□□□□ -1.49
PRPF3-206ENST00000493553 LOC101927531A0A1B0GV80 90 aa5.73□□□□□ -1.49
PRPF3-206ENST00000493553 SMR3BP02814 79 aaPredicted RBP5.73□□□□□ -1.49
PRPF3-206ENST00000493553 SACSQ9NZJ4 4579 aa5.73□□□□□ -1.49
PRPF3-206ENST00000493553 CYP4F30PQ9H0H9 118 aa5.72□□□□□ -1.49
PRPF3-206ENST00000493553 SVIPQ8NHG7 77 aa5.71□□□□□ -1.5
PRPF3-206ENST00000493553 LRP1BQ9NZR2 4599 aa5.71□□□□□ -1.5
PRPF3-206ENST00000493553 SMIM26A0A096LP01 95 aa5.7□□□□□ -1.5
PRPF3-206ENST00000493553 KRTAP10-6P60371 365 aaPredicted RBP5.7□□□□□ -1.5
PRPF3-206ENST00000493553 KRTAP10-4P60372 401 aaPredicted RBP5.7□□□□□ -1.5
PRPF3-206ENST00000493553 DYNC1H1Q14204 4646 aaKnown RBP5.68□□□□□ -1.5
PRPF3-206ENST00000493553 MT3P25713 68 aa5.66□□□□□ -1.5
PRPF3-206ENST00000493553 NOTCH2NLQ7Z3S9 236 aa5.66□□□□□ -1.5
PRPF3-206ENST00000493553 IGLV7-46A0A075B6I9 117 aa5.65□□□□□ -1.5
PRPF3-206ENST00000493553 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.5
PRPF3-206ENST00000493553 HYDINQ4G0P3 5121 aa5.64□□□□□ -1.51
PRPF3-206ENST00000493553 VPS13BQ7Z7G8 4022 aa5.64□□□□□ -1.51
PRPF3-206ENST00000493553 RYR2Q92736 4967 aa5.62□□□□□ -1.51
PRPF3-206ENST00000493553 KRTAP16-1A8MUX0 517 aa5.61□□□□□ -1.51
PRPF3-206ENST00000493553 KRTAP13-3Q3SY46 172 aa5.61□□□□□ -1.51
PRPF3-206ENST00000493553 Q5VSD8 79 aa5.61□□□□□ -1.51
PRPF3-206ENST00000493553 A0A0A0MQY5 61 aa5.6□□□□□ -1.51
PRPF3-206ENST00000493553 V9GYY9 64 aa5.6□□□□□ -1.51
PRPF3-206ENST00000493553 PKHD1P08F94 4074 aa5.59□□□□□ -1.51
PRPF3-206ENST00000493553 FP248Q71RG6 208 aaPredicted RBP5.59□□□□□ -1.51
PRPF3-206ENST00000493553 OXTP01178 125 aa5.57□□□□□ -1.52
PRPF3-206ENST00000493553 KRTAP10-8P60410 259 aa5.57□□□□□ -1.52
PRPF3-206ENST00000493553 PCOTHQ58A44 107 aa5.57□□□□□ -1.52
PRPF3-206ENST00000493553 Q5W150 140 aa5.57□□□□□ -1.52
PRPF3-206ENST00000493553 APOBP04114 4563 aaKnown RBP5.55□□□□□ -1.52
PRPF3-206ENST00000493553 ACYP2P14621 99 aa5.54□□□□□ -1.52
PRPF3-206ENST00000493553 C20orf166-AS1Q96NR2 134 aa5.54□□□□□ -1.52
PRPF3-206ENST00000493553 A8MUU9 505 aa5.53□□□□□ -1.52
PRPF3-206ENST00000493553 PRR4Q16378 134 aa5.53□□□□□ -1.52
PRPF3-206ENST00000493553 Q1T7F1 81 aa5.52□□□□□ -1.53
PRPF3-206ENST00000493553 C7orf65Q6ZTY9 151 aa5.52□□□□□ -1.53
PRPF3-206ENST00000493553 KMT2CQ8NEZ4 4911 aaKnown RBP5.51□□□□□ -1.53
PRPF3-206ENST00000493553 COA5Q86WW8 74 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms