RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 SFTA2Q6UW10 78 aa1.45□□□□□ -2.18
PTCD3-218ENST00000493430 HIST3H2BBQ8N257 126 aa1.45□□□□□ -2.18
PTCD3-218ENST00000493430 HIST1H2BLQ99880 126 aa1.45□□□□□ -2.18
PTCD3-218ENST00000493430 LOC107984156A0A0G2JMH3 177 aa1.44□□□□□ -2.18
PTCD3-218ENST00000493430 TRBV10-2A0A0K0K1G8 114 aa1.44□□□□□ -2.18
PTCD3-218ENST00000493430 LINC01549A6NIU2 74 aa1.44□□□□□ -2.18
PTCD3-218ENST00000493430 ARL17AQ8IVW1 177 aa1.44□□□□□ -2.18
PTCD3-218ENST00000493430 SPANXCQ9NY87 97 aa1.44□□□□□ -2.18
PTCD3-218ENST00000493430 K7ERJ3 54 aa1.43□□□□□ -2.18
PTCD3-218ENST00000493430 NDUFC2O95298 119 aa1.43□□□□□ -2.18
PTCD3-218ENST00000493430 SPINK1P00995 79 aa1.43□□□□□ -2.18
PTCD3-218ENST00000493430 SPRR1BP22528 89 aa1.43□□□□□ -2.18
PTCD3-218ENST00000493430 S100A2P29034 98 aa1.43□□□□□ -2.18
PTCD3-218ENST00000493430 Q6ZQY7 126 aa1.43□□□□□ -2.18
PTCD3-218ENST00000493430 C2orf91Q6ZV80 131 aa1.43□□□□□ -2.18
PTCD3-218ENST00000493430 C14orf144Q96I85 54 aa1.43□□□□□ -2.18
PTCD3-218ENST00000493430 SPANXDQ9BXN6 97 aa1.43□□□□□ -2.18
PTCD3-218ENST00000493430 IGLV5-48A0A075B6I7 105 aa1.42□□□□□ -2.18
PTCD3-218ENST00000493430 SLC25A20O43772 301 aa1.42□□□□□ -2.18
PTCD3-218ENST00000493430 TIMM17BO60830 172 aa1.42□□□□□ -2.18
PTCD3-218ENST00000493430 FXYD2P54710 66 aa1.42□□□□□ -2.18
PTCD3-218ENST00000493430 LINC00313P59037 77 aa1.42□□□□□ -2.18
PTCD3-218ENST00000493430 RPL37P61927 97 aaKnown RBP1.42□□□□□ -2.18
PTCD3-218ENST00000493430 JOSD1Q15040 202 aaPredicted RBP1.42□□□□□ -2.18
PTCD3-218ENST00000493430 SPAG11AQ6PDA7 123 aa1.42□□□□□ -2.18
PTCD3-218ENST00000493430 Q6Q795 121 aa1.42□□□□□ -2.18
PTCD3-218ENST00000493430 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.42□□□□□ -2.18
PTCD3-218ENST00000493430 FP248Q71RG6 208 aaPredicted RBP1.42□□□□□ -2.18
PTCD3-218ENST00000493430 CLEC2BQ92478 149 aa1.42□□□□□ -2.18
PTCD3-218ENST00000493430 OBSCN-AS1Q96MR7 158 aa1.42□□□□□ -2.18
PTCD3-218ENST00000493430 NAA38Q9BRA0 125 aaKnown RBP1.42□□□□□ -2.18
PTCD3-218ENST00000493430 FSIP2Q5CZC0 6907 aa1.41□□□□□ -2.18
PTCD3-218ENST00000493430 TEX49A0A1B0GTD5 131 aa1.41□□□□□ -2.18
PTCD3-218ENST00000493430 A8MWP4 228 aa1.41□□□□□ -2.18
PTCD3-218ENST00000493430 LINC00575Q6W349 94 aa1.41□□□□□ -2.18
PTCD3-218ENST00000493430 SSBP3-AS1Q7Z2R9 100 aa1.41□□□□□ -2.18
PTCD3-218ENST00000493430 Q96NJ1 140 aa1.41□□□□□ -2.18
PTCD3-218ENST00000493430 LAMTOR3Q9UHA4 124 aa1.41□□□□□ -2.18
PTCD3-218ENST00000493430 TRBV7-7A0A0K0K1E9 115 aa1.4□□□□□ -2.19
PTCD3-218ENST00000493430 M0R2T5 61 aa1.4□□□□□ -2.19
PTCD3-218ENST00000493430 AKR1D1P51857 326 aa1.4□□□□□ -2.19
PTCD3-218ENST00000493430 S100A12P80511 92 aa1.4□□□□□ -2.19
PTCD3-218ENST00000493430 PMAIP1Q13794 54 aa1.4□□□□□ -2.19
PTCD3-218ENST00000493430 SPATA45Q537H7 98 aa1.4□□□□□ -2.19
PTCD3-218ENST00000493430 COX6B2Q6YFQ2 88 aa1.4□□□□□ -2.19
PTCD3-218ENST00000493430 PRO1933Q9H354 126 aa1.4□□□□□ -2.19
PTCD3-218ENST00000493430 NHP2Q9NX24 153 aaKnown RBP1.4□□□□□ -2.19
PTCD3-218ENST00000493430 A0A087WSZ3 146 aa1.39□□□□□ -2.19
PTCD3-218ENST00000493430 A0A1W2PNM2 257 aa1.39□□□□□ -2.19
PTCD3-218ENST00000493430 A8MUU9 505 aa1.39□□□□□ -2.19
PTCD3-218ENST00000493430 LINC00587B1AMM8 73 aa1.39□□□□□ -2.19
PTCD3-218ENST00000493430 H3BQ85 93 aa1.39□□□□□ -2.19
PTCD3-218ENST00000493430 COX8AP10176 69 aa1.39□□□□□ -2.19
PTCD3-218ENST00000493430 SIGMAR1Q99720 223 aa1.39□□□□□ -2.19
PTCD3-218ENST00000493430 LIMD2Q9BT23 127 aa1.39□□□□□ -2.19
PTCD3-218ENST00000493430 hADV29S1A0JD25 119 aa1.38□□□□□ -2.19
PTCD3-218ENST00000493430 A6NED7 52 aa1.38□□□□□ -2.19
PTCD3-218ENST00000493430 F8WEM9 126 aa1.38□□□□□ -2.19
PTCD3-218ENST00000493430 MT2AP02795 61 aa1.38□□□□□ -2.19
PTCD3-218ENST00000493430 MT1FP04733 61 aa1.38□□□□□ -2.19
PTCD3-218ENST00000493430 HINT1P49773 126 aaPredicted RBP1.38□□□□□ -2.19
PTCD3-218ENST00000493430 RPS29P62273 56 aaKnown RBP1.38□□□□□ -2.19
PTCD3-218ENST00000493430 OCIAD2Q56VL3 154 aa1.38□□□□□ -2.19
PTCD3-218ENST00000493430 PYY3Q5JQD4 70 aa1.38□□□□□ -2.19
PTCD3-218ENST00000493430 SPINT4Q6UDR6 99 aa1.38□□□□□ -2.19
PTCD3-218ENST00000493430 SSPOA2VEC9 5147 aa1.37□□□□□ -2.19
PTCD3-218ENST00000493430 TRAV13-2A0A0B4J235 113 aa1.37□□□□□ -2.19
PTCD3-218ENST00000493430 A0A0B4J2C4 111 aa1.37□□□□□ -2.19
PTCD3-218ENST00000493430 A0A1B0GW54 56 aa1.37□□□□□ -2.19
PTCD3-218ENST00000493430 FABP2P12104 132 aa1.37□□□□□ -2.19
PTCD3-218ENST00000493430 IFITM1P13164 125 aa1.37□□□□□ -2.19
PTCD3-218ENST00000493430 RBM3P98179 157 aaKnown RBP1.37□□□□□ -2.19
PTCD3-218ENST00000493430 ADM2Q7Z4H4 148 aa1.37□□□□□ -2.19
PTCD3-218ENST00000493430 RAB37Q96AX2 223 aa1.37□□□□□ -2.19
PTCD3-218ENST00000493430 VPS25Q9BRG1 176 aa1.37□□□□□ -2.19
PTCD3-218ENST00000493430 VAMP8Q9BV40 100 aa1.37□□□□□ -2.19
PTCD3-218ENST00000493430 USH2AO75445 5202 aa1.36□□□□□ -2.19
PTCD3-218ENST00000493430 TRBV7-6A0A0J9YX20 115 aa1.36□□□□□ -2.19
PTCD3-218ENST00000493430 LST1O00453 97 aa1.36□□□□□ -2.19
PTCD3-218ENST00000493430 HRES1P13985 223 aa1.36□□□□□ -2.19
PTCD3-218ENST00000493430 FAM236DA0A1B0GTK5 79 aa1.35□□□□□ -2.19
PTCD3-218ENST00000493430 A8MUN3 132 aa1.35□□□□□ -2.19
PTCD3-218ENST00000493430 H3BMG7 143 aa1.35□□□□□ -2.19
PTCD3-218ENST00000493430 FAM236CP0DP71 79 aa1.35□□□□□ -2.19
PTCD3-218ENST00000493430 Q5XG85 94 aa1.35□□□□□ -2.19
PTCD3-218ENST00000493430 SNHG12Q9BXW3 62 aa1.35□□□□□ -2.19
PTCD3-218ENST00000493430 A0A1B0GU33 70 aa1.34□□□□□ -2.19
PTCD3-218ENST00000493430 TCL1BO95988 128 aa1.34□□□□□ -2.19
PTCD3-218ENST00000493430 S100A1P23297 94 aa1.34□□□□□ -2.19
PTCD3-218ENST00000493430 ANKRD29Q8N6D5 301 aa1.34□□□□□ -2.19
PTCD3-218ENST00000493430 C20orf166-AS1Q96NR2 134 aa1.34□□□□□ -2.19
PTCD3-218ENST00000493430 HIGD1BQ9P298 99 aa1.34□□□□□ -2.19
PTCD3-218ENST00000493430 PRO1854Q9UHT4 67 aa1.34□□□□□ -2.19
PTCD3-218ENST00000493430 DLEU1O43261 78 aa1.33□□□□□ -2.2
PTCD3-218ENST00000493430 CCKP06307 115 aa1.33□□□□□ -2.2
PTCD3-218ENST00000493430 BVES-AS1Q5T3Y7 98 aa1.33□□□□□ -2.2
PTCD3-218ENST00000493430 Q6JHZ5 121 aa1.33□□□□□ -2.2
PTCD3-218ENST00000493430 ATP11AUNQ6ZP68 121 aa1.33□□□□□ -2.2
PTCD3-218ENST00000493430 WFDC13Q8IUB5 93 aa1.33□□□□□ -2.2
PTCD3-218ENST00000493430 LINC00472Q9H8W2 130 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms