RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 C1orf195Q5TG92 126 aa3.73□□□□□ -1.81
VPS52-219ENST00000493379 TRBV20-1A0A075B6N2 111 aa3.72□□□□□ -1.81
VPS52-219ENST00000493379 H3BMG7 143 aa3.72□□□□□ -1.81
VPS52-219ENST00000493379 TAX1BP3O14907 124 aa3.72□□□□□ -1.81
VPS52-219ENST00000493379 DNAL4O96015 105 aa3.72□□□□□ -1.81
VPS52-219ENST00000493379 SCGB1C2P0DMR2 95 aa3.72□□□□□ -1.81
VPS52-219ENST00000493379 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
VPS52-219ENST00000493379 TEN1Q86WV5 123 aa3.72□□□□□ -1.81
VPS52-219ENST00000493379 TCL1BO95988 128 aa3.71□□□□□ -1.82
VPS52-219ENST00000493379 HRCT1Q6UXD1 115 aa3.71□□□□□ -1.82
VPS52-219ENST00000493379 TRBV7-4A0A0J9YYF1 115 aa3.7□□□□□ -1.82
VPS52-219ENST00000493379 A0A1W2PNM2 257 aa3.7□□□□□ -1.82
VPS52-219ENST00000493379 H3BUT2 72 aa3.7□□□□□ -1.82
VPS52-219ENST00000493379 BAALC-AS2P0C853 105 aa3.7□□□□□ -1.82
VPS52-219ENST00000493379 FABP2P12104 132 aa3.7□□□□□ -1.82
VPS52-219ENST00000493379 ATXN8Q156A1 80 aa3.7□□□□□ -1.82
VPS52-219ENST00000493379 LYRM7Q5U5X0 104 aa3.69□□□□□ -1.82
VPS52-219ENST00000493379 OBSCN-AS1Q96MR7 158 aa3.69□□□□□ -1.82
VPS52-219ENST00000493379 A0A1W2PPM0 123 aa3.68□□□□□ -1.82
VPS52-219ENST00000493379 ANKRD29Q8N6D5 301 aa3.68□□□□□ -1.82
VPS52-219ENST00000493379 NAA38Q9BRA0 125 aaKnown RBP3.68□□□□□ -1.82
VPS52-219ENST00000493379 OCR1Q9BZK8 76 aa3.68□□□□□ -1.82
VPS52-219ENST00000493379 A0A1B0GW54 56 aa3.67□□□□□ -1.82
VPS52-219ENST00000493379 JMJD7-PLA2G4BH0Y9G9 81 aa3.67□□□□□ -1.82
VPS52-219ENST00000493379 RBM3P98179 157 aaKnown RBP3.67□□□□□ -1.82
VPS52-219ENST00000493379 Q96NJ1 140 aa3.67□□□□□ -1.82
VPS52-219ENST00000493379 BATFQ16520 125 aa3.66□□□□□ -1.82
VPS52-219ENST00000493379 COL5A1-AS1Q5SY13 56 aa3.66□□□□□ -1.82
VPS52-219ENST00000493379 SS18L2Q9UHA2 77 aa3.66□□□□□ -1.82
VPS52-219ENST00000493379 A0A087WSZ3 146 aa3.65□□□□□ -1.83
VPS52-219ENST00000493379 LOC110117498A0A087WWA1 95 aa3.65□□□□□ -1.83
VPS52-219ENST00000493379 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
VPS52-219ENST00000493379 H3BT86 120 aa3.65□□□□□ -1.83
VPS52-219ENST00000493379 PDE6GP18545 87 aa3.65□□□□□ -1.83
VPS52-219ENST00000493379 LINC00472Q9H8W2 130 aa3.65□□□□□ -1.83
VPS52-219ENST00000493379 CCKP06307 115 aa3.64□□□□□ -1.83
VPS52-219ENST00000493379 Q6ZQT0 140 aa3.64□□□□□ -1.83
VPS52-219ENST00000493379 DSCR8Q96T75 97 aa3.64□□□□□ -1.83
VPS52-219ENST00000493379 C9JAW5 83 aa3.63□□□□□ -1.83
VPS52-219ENST00000493379 PRO0461Q9UI25 63 aa3.62□□□□□ -1.83
VPS52-219ENST00000493379 KRTAP6-3Q3LI67 103 aa3.61□□□□□ -1.83
VPS52-219ENST00000493379 SPCS1Q9Y6A9 102 aa3.61□□□□□ -1.83
VPS52-219ENST00000493379 MT3P25713 68 aa3.6□□□□□ -1.83
VPS52-219ENST00000493379 KRTAP10-6P60371 365 aaPredicted RBP3.6□□□□□ -1.83
VPS52-219ENST00000493379 KRTAP4-1Q9BYQ7 146 aa3.6□□□□□ -1.83
VPS52-219ENST00000493379 C9orf92A6NGG3 77 aa3.59□□□□□ -1.83
VPS52-219ENST00000493379 K7EP34 96 aa3.59□□□□□ -1.83
VPS52-219ENST00000493379 RPL37P61927 97 aaKnown RBP3.59□□□□□ -1.83
VPS52-219ENST00000493379 C20orf166-AS1Q96NR2 134 aa3.59□□□□□ -1.83
VPS52-219ENST00000493379 J3KT08 172 aa3.58□□□□□ -1.84
VPS52-219ENST00000493379 MT1HP80294 61 aa3.58□□□□□ -1.84
VPS52-219ENST00000493379 KRTAP9-8Q9BYQ0 159 aa3.58□□□□□ -1.84
VPS52-219ENST00000493379 C14orf132Q9NPU4 83 aa3.58□□□□□ -1.84
VPS52-219ENST00000493379 A0A1B0GV72 72 aa3.57□□□□□ -1.84
VPS52-219ENST00000493379 PCP4L1A6NKN8 68 aa3.57□□□□□ -1.84
VPS52-219ENST00000493379 A8MUU9 505 aa3.57□□□□□ -1.84
VPS52-219ENST00000493379 KRTAP16-1A8MUX0 517 aa3.57□□□□□ -1.84
VPS52-219ENST00000493379 F8W1H4 67 aa3.57□□□□□ -1.84
VPS52-219ENST00000493379 IGKV4-1P06312 121 aa3.56□□□□□ -1.84
VPS52-219ENST00000493379 GTF2H5Q6ZYL4 71 aa3.56□□□□□ -1.84
VPS52-219ENST00000493379 LINC00313P59037 77 aa3.55□□□□□ -1.84
VPS52-219ENST00000493379 PCOTHQ58A44 107 aa3.55□□□□□ -1.84
VPS52-219ENST00000493379 MTURNQ8N3F0 131 aa3.55□□□□□ -1.84
VPS52-219ENST00000493379 VPS25Q9BRG1 176 aa3.55□□□□□ -1.84
VPS52-219ENST00000493379 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
VPS52-219ENST00000493379 GPR98Q8WXG9 6306 aa3.55□□□□□ -1.84
VPS52-219ENST00000493379 A0A1B0GVX0 72 aa3.54□□□□□ -1.84
VPS52-219ENST00000493379 C8orf87E5RJ46 101 aa3.54□□□□□ -1.84
VPS52-219ENST00000493379 KRTAP19-2Q3LHN2 52 aa3.54□□□□□ -1.84
VPS52-219ENST00000493379 A8MWP4 228 aa3.53□□□□□ -1.84
VPS52-219ENST00000493379 NREPQ16612 68 aa3.53□□□□□ -1.84
VPS52-219ENST00000493379 DEFB116Q30KQ4 102 aa3.53□□□□□ -1.84
VPS52-219ENST00000493379 IGKV3D-7A0A0C4DH55 119 aa3.52□□□□□ -1.85
VPS52-219ENST00000493379 DSCR10P59022 87 aa3.52□□□□□ -1.85
VPS52-219ENST00000493379 PRR15Q8IV56 129 aa3.52□□□□□ -1.85
VPS52-219ENST00000493379 NDUFB1O75438 58 aa3.51□□□□□ -1.85
VPS52-219ENST00000493379 ATP11AUNQ6ZP68 121 aa3.51□□□□□ -1.85
VPS52-219ENST00000493379 SIGMAR1Q99720 223 aa3.51□□□□□ -1.85
VPS52-219ENST00000493379 IGHV6-1A0A0B4J1U7 121 aa3.5□□□□□ -1.85
VPS52-219ENST00000493379 ETDBQ3ZM63 59 aa3.49□□□□□ -1.85
VPS52-219ENST00000493379 C8orf17Q9NRJ1 99 aa3.49□□□□□ -1.85
VPS52-219ENST00000493379 LINC00846Q9NV44 126 aa3.49□□□□□ -1.85
VPS52-219ENST00000493379 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
VPS52-219ENST00000493379 KMT2DO14686 5537 aa3.48□□□□□ -1.85
VPS52-219ENST00000493379 MMP24-AS1A0A0U1RRL7 71 aa3.47□□□□□ -1.85
VPS52-219ENST00000493379 BPY2O14599 106 aa3.47□□□□□ -1.85
VPS52-219ENST00000493379 UBL5Q9BZL1 73 aa3.46□□□□□ -1.86
VPS52-219ENST00000493379 FAM240AA0A1B0GVK7 77 aa3.45□□□□□ -1.86
VPS52-219ENST00000493379 K7EQZ3 153 aa3.45□□□□□ -1.86
VPS52-219ENST00000493379 ACYP1P07311 99 aa3.45□□□□□ -1.86
VPS52-219ENST00000493379 TMEM254Q8TBM7 123 aa3.45□□□□□ -1.86
VPS52-219ENST00000493379 CXCL6P80162 114 aa3.44□□□□□ -1.86
VPS52-219ENST00000493379 ZCCHC13Q8WW36 166 aaKnown RBP3.44□□□□□ -1.86
VPS52-219ENST00000493379 MRPL34Q9BQ48 92 aaKnown RBP3.44□□□□□ -1.86
VPS52-219ENST00000493379 FLGP20930 4061 aaPredicted RBP3.43□□□□□ -1.86
VPS52-219ENST00000493379 A0A1B0GV90 55 aa3.43□□□□□ -1.86
VPS52-219ENST00000493379 hDV103S1A0JD37 113 aa3.43□□□□□ -1.86
VPS52-219ENST00000493379 M0R2T5 61 aa3.42□□□□□ -1.86
VPS52-219ENST00000493379 HRES1P13985 223 aa3.42□□□□□ -1.86
VPS52-219ENST00000493379 SEC61GP60059 68 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms