RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 CELSR2Q9HCU4 2923 aa3.73□□□□□ -1.81
NF1-215ENST00000493220 LAMA5O15230 3695 aa3.72□□□□□ -1.81
NF1-215ENST00000493220 KRTAP13-1Q8IUC0 172 aa3.71□□□□□ -1.81
NF1-215ENST00000493220 NBPF19A0A087WUL8 3843 aa3.71□□□□□ -1.82
NF1-215ENST00000493220 KRTAP7-1Q8IUC3 87 aa3.71□□□□□ -1.82
NF1-215ENST00000493220 OTOGQ6ZRI0 2925 aa3.71□□□□□ -1.82
NF1-215ENST00000493220 ZZEF1O43149 2961 aa3.71□□□□□ -1.82
NF1-215ENST00000493220 SPANXA2-OT1Q8N9U9 137 aa3.7□□□□□ -1.82
NF1-215ENST00000493220 STAB1Q9NY15 2570 aa3.69□□□□□ -1.82
NF1-215ENST00000493220 KRTAP11-1Q8IUC1 163 aa3.69□□□□□ -1.82
NF1-215ENST00000493220 RELNP78509 3460 aa3.69□□□□□ -1.82
NF1-215ENST00000493220 A0A087X002 238 aa3.68□□□□□ -1.82
NF1-215ENST00000493220 M0R2T5 61 aa3.68□□□□□ -1.82
NF1-215ENST00000493220 Q8N9P0 234 aaPredicted RBP3.68□□□□□ -1.82
NF1-215ENST00000493220 LINC00472Q9H8W2 130 aa3.67□□□□□ -1.82
NF1-215ENST00000493220 ZCCHC13Q8WW36 166 aaKnown RBP3.67□□□□□ -1.82
NF1-215ENST00000493220 AKAP9Q99996 3911 aa3.67□□□□□ -1.82
NF1-215ENST00000493220 LINC01558Q9Y6Z2 57 aa3.67□□□□□ -1.82
NF1-215ENST00000493220 CFAP47Q6ZTR5 3102 aa3.66□□□□□ -1.82
NF1-215ENST00000493220 A0A1B0GU33 70 aa3.66□□□□□ -1.82
NF1-215ENST00000493220 KRTAP23-1A1A580 65 aa3.65□□□□□ -1.82
NF1-215ENST00000493220 C20orf166-AS1Q96NR2 134 aa3.65□□□□□ -1.82
NF1-215ENST00000493220 ALMS1Q8TCU4 4167 aa3.64□□□□□ -1.83
NF1-215ENST00000493220 MMP24-AS1A0A0U1RRL7 71 aa3.64□□□□□ -1.83
NF1-215ENST00000493220 CRYBG3Q68DQ2 2970 aa3.64□□□□□ -1.83
NF1-215ENST00000493220 KRTAP13-2Q52LG2 175 aa3.64□□□□□ -1.83
NF1-215ENST00000493220 HRES1P13985 223 aa3.62□□□□□ -1.83
NF1-215ENST00000493220 SPENQ96T58 3664 aaKnown RBP3.62□□□□□ -1.83
NF1-215ENST00000493220 KRTAP29-1A8MX34 341 aaPredicted RBP3.61□□□□□ -1.83
NF1-215ENST00000493220 DCHS2Q6V1P9 2916 aa3.61□□□□□ -1.83
NF1-215ENST00000493220 KRTAP25-1Q3LHN0 102 aa3.61□□□□□ -1.83
NF1-215ENST00000493220 SPINK7P58062 85 aa3.61□□□□□ -1.83
NF1-215ENST00000493220 ZANQ9Y493 2812 aa3.6□□□□□ -1.83
NF1-215ENST00000493220 SMG1Q96Q15 3661 aaKnown RBP3.59□□□□□ -1.83
NF1-215ENST00000493220 NOTCH1P46531 2555 aa3.59□□□□□ -1.83
NF1-215ENST00000493220 A8MU10 97 aa3.59□□□□□ -1.84
NF1-215ENST00000493220 TACC2O95359 2948 aa3.59□□□□□ -1.84
NF1-215ENST00000493220 S4R3F8 94 aa3.59□□□□□ -1.84
NF1-215ENST00000493220 KRTAP1-4P0C5Y4 121 aa3.58□□□□□ -1.84
NF1-215ENST00000493220 A8MUU9 505 aa3.58□□□□□ -1.84
NF1-215ENST00000493220 FLG2Q5D862 2391 aaPredicted RBP3.57□□□□□ -1.84
NF1-215ENST00000493220 NIPBLQ6KC79 2804 aaeCLIP3.57□□□□□ -1.84
NF1-215ENST00000493220 MXRA5Q9NR99 2828 aa3.57□□□□□ -1.84
NF1-215ENST00000493220 HUWE1Q7Z6Z7 4374 aaKnown RBP3.56□□□□□ -1.84
NF1-215ENST00000493220 R4GN34 69 aa3.56□□□□□ -1.84
NF1-215ENST00000493220 RPL37P61927 97 aaKnown RBP3.55□□□□□ -1.84
NF1-215ENST00000493220 Q5W150 140 aa3.55□□□□□ -1.84
NF1-215ENST00000493220 FBN1P35555 2871 aaKnown RBP3.54□□□□□ -1.84
NF1-215ENST00000493220 NBEAL2Q6ZNJ1 2754 aa3.52□□□□□ -1.85
NF1-215ENST00000493220 TPRXLQ17RH7 258 aa3.52□□□□□ -1.85
NF1-215ENST00000493220 CSMD1Q96PZ7 3565 aa3.51□□□□□ -1.85
NF1-215ENST00000493220 KRTAP10-8P60410 259 aa3.5□□□□□ -1.85
NF1-215ENST00000493220 NBEAL1Q6ZS30 2694 aa3.49□□□□□ -1.85
NF1-215ENST00000493220 M0QZ58 72 aa3.48□□□□□ -1.85
NF1-215ENST00000493220 ANK2Q01484 3957 aa3.47□□□□□ -1.85
NF1-215ENST00000493220 PLAC4Q8WY50 150 aa3.47□□□□□ -1.85
NF1-215ENST00000493220 DNAH9Q9NYC9 4486 aa3.47□□□□□ -1.85
NF1-215ENST00000493220 CSMD2Q7Z408 3487 aa3.47□□□□□ -1.85
NF1-215ENST00000493220 H1FX-AS1Q4G0G2 97 aa3.47□□□□□ -1.85
NF1-215ENST00000493220 NF1P21359 2839 aa3.46□□□□□ -1.86
NF1-215ENST00000493220 XP32Q5T750 250 aa3.45□□□□□ -1.86
NF1-215ENST00000493220 SVEP1Q4LDE5 3571 aa3.44□□□□□ -1.86
NF1-215ENST00000493220 SPATA8Q6RVD6 105 aa3.44□□□□□ -1.86
NF1-215ENST00000493220 KRTAP13-3Q3SY46 172 aa3.42□□□□□ -1.86
NF1-215ENST00000493220 ZNF469Q96JG9 3925 aaPredicted RBP3.42□□□□□ -1.86
NF1-215ENST00000493220 TENM1Q9UKZ4 2725 aa3.41□□□□□ -1.86
NF1-215ENST00000493220 CELSR1Q9NYQ6 3014 aa3.41□□□□□ -1.86
NF1-215ENST00000493220 DMBT1Q9UGM3 2413 aaPredicted RBP3.4□□□□□ -1.87
NF1-215ENST00000493220 ZFHX3Q15911 3703 aa3.4□□□□□ -1.87
NF1-215ENST00000493220 VPS13CQ709C8 3753 aa3.38□□□□□ -1.87
NF1-215ENST00000493220 VWFP04275 2813 aa3.38□□□□□ -1.87
NF1-215ENST00000493220 DNAH3Q8TD57 4116 aa3.37□□□□□ -1.87
NF1-215ENST00000493220 TRRAPQ9Y4A5 3859 aa3.37□□□□□ -1.87
NF1-215ENST00000493220 STAB2Q8WWQ8 2551 aa3.37□□□□□ -1.87
NF1-215ENST00000493220 TENM2Q9NT68 2774 aa3.37□□□□□ -1.87
NF1-215ENST00000493220 CMYA5Q8N3K9 4069 aa3.37□□□□□ -1.87
NF1-215ENST00000493220 DNAH6Q9C0G6 4158 aa3.36□□□□□ -1.87
NF1-215ENST00000493220 FBN3Q75N90 2809 aa3.36□□□□□ -1.87
NF1-215ENST00000493220 P0C880 135 aa3.35□□□□□ -1.87
NF1-215ENST00000493220 TENM3Q9P273 2699 aa3.34□□□□□ -1.88
NF1-215ENST00000493220 KRTAP10-4P60372 401 aaPredicted RBP3.33□□□□□ -1.88
NF1-215ENST00000493220 MT1HL1P0DM35 61 aa3.31□□□□□ -1.88
NF1-215ENST00000493220 CUBNO60494 3623 aa3.3□□□□□ -1.88
NF1-215ENST00000493220 DYNC2H1Q8NCM8 4307 aaKnown RBP3.3□□□□□ -1.88
NF1-215ENST00000493220 VPS13DQ5THJ4 4388 aa3.29□□□□□ -1.88
NF1-215ENST00000493220 DNAH1Q9P2D7 4330 aa3.29□□□□□ -1.88
NF1-215ENST00000493220 PKD1L1Q8TDX9 2849 aa3.28□□□□□ -1.88
NF1-215ENST00000493220 KRTAP3-3Q9BYR6 98 aa3.27□□□□□ -1.89
NF1-215ENST00000493220 KRTAP3-2Q9BYR7 98 aa3.27□□□□□ -1.89
NF1-215ENST00000493220 KRTAP4-5Q9BYR2 181 aa3.26□□□□□ -1.89
NF1-215ENST00000493220 TNP1P09430 55 aa3.24□□□□□ -1.89
NF1-215ENST00000493220 DNAH10Q8IVF4 4471 aa3.24□□□□□ -1.89
NF1-215ENST00000493220 DNAH11Q96DT5 4516 aa3.24□□□□□ -1.89
NF1-215ENST00000493220 PLECQ15149 4684 aaKnown RBP3.23□□□□□ -1.89
NF1-215ENST00000493220 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
NF1-215ENST00000493220 DNAH17Q9UFH2 4485 aa3.23□□□□□ -1.89
NF1-215ENST00000493220 C10orf95Q9H7T3 257 aa3.22□□□□□ -1.89
NF1-215ENST00000493220 MEGF8Q7Z7M0 2845 aa3.21□□□□□ -1.9
NF1-215ENST00000493220 PRO2289Q9P1D8 64 aa3.2□□□□□ -1.9
NF1-215ENST00000493220 PRKDCP78527 4128 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms