RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 UBE2L3P68036 154 aaKnown RBP1.47□□□□□ -2.17
SNX13-209ENST00000492626 DEFB135Q30KP9 77 aa1.47□□□□□ -2.17
SNX13-209ENST00000492626 ZNF625Q96I27 306 aaPredicted RBP1.47□□□□□ -2.17
SNX13-209ENST00000492626 RETNLBQ9BQ08 111 aa1.47□□□□□ -2.17
SNX13-209ENST00000492626 TRBV7-4A0A0J9YYF1 115 aa1.46□□□□□ -2.18
SNX13-209ENST00000492626 F8VRH5 84 aa1.46□□□□□ -2.18
SNX13-209ENST00000492626 KRTAP9-6A8MVA2 160 aa1.46□□□□□ -2.18
SNX13-209ENST00000492626 LEAP2Q969E1 77 aa1.46□□□□□ -2.18
SNX13-209ENST00000492626 OBSCN-AS1Q96MR7 158 aa1.46□□□□□ -2.18
SNX13-209ENST00000492626 SORL1Q92673 2214 aa1.46□□□□□ -2.18
SNX13-209ENST00000492626 TRAV12-3A0A0B4J271 114 aa1.46□□□□□ -2.18
SNX13-209ENST00000492626 Q5VV11 94 aa1.46□□□□□ -2.18
SNX13-209ENST00000492626 TRAV12-1A0A0B4J245 112 aa1.45□□□□□ -2.18
SNX13-209ENST00000492626 SMR3BP02814 79 aaPredicted RBP1.45□□□□□ -2.18
SNX13-209ENST00000492626 SPTSSAQ969W0 71 aa1.45□□□□□ -2.18
SNX13-209ENST00000492626 TRBV6-5A0A0K0K1A5 114 aa1.45□□□□□ -2.18
SNX13-209ENST00000492626 RPL39P5Q59GN2 51 aa1.45□□□□□ -2.18
SNX13-209ENST00000492626 Q6JHZ5 121 aa1.45□□□□□ -2.18
SNX13-209ENST00000492626 TMEM167BQ9NRX6 74 aa1.45□□□□□ -2.18
SNX13-209ENST00000492626 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.45□□□□□ -2.18
SNX13-209ENST00000492626 TRAV13-2A0A0B4J235 113 aa1.45□□□□□ -2.18
SNX13-209ENST00000492626 TRAV22A0A0B4J277 110 aa1.45□□□□□ -2.18
SNX13-209ENST00000492626 IGHV1-58A0A0C4DH39 117 aa1.45□□□□□ -2.18
SNX13-209ENST00000492626 PLNP26678 52 aa1.45□□□□□ -2.18
SNX13-209ENST00000492626 CKS2P33552 79 aa1.45□□□□□ -2.18
SNX13-209ENST00000492626 RPL39P62891 51 aaKnown RBP1.45□□□□□ -2.18
SNX13-209ENST00000492626 RPL39LQ96EH5 51 aaKnown RBP1.45□□□□□ -2.18
SNX13-209ENST00000492626 M0R3E3 92 aa1.44□□□□□ -2.18
SNX13-209ENST00000492626 PRB3Q04118 309 aaPredicted RBP1.44□□□□□ -2.18
SNX13-209ENST00000492626 ENHOQ6UWT2 76 aa1.44□□□□□ -2.18
SNX13-209ENST00000492626 PHF5AQ7RTV0 110 aaKnown RBP1.44□□□□□ -2.18
SNX13-209ENST00000492626 Q8TAT8 98 aa1.44□□□□□ -2.18
SNX13-209ENST00000492626 TRBV27A0A0K0K1C4 114 aa1.44□□□□□ -2.18
SNX13-209ENST00000492626 hDV103S1A0JD37 113 aa1.44□□□□□ -2.18
SNX13-209ENST00000492626 A8MTW9 85 aa1.44□□□□□ -2.18
SNX13-209ENST00000492626 MT1HP80294 61 aa1.44□□□□□ -2.18
SNX13-209ENST00000492626 DEFB136Q30KP8 78 aa1.44□□□□□ -2.18
SNX13-209ENST00000492626 SPANXDQ9BXN6 97 aa1.44□□□□□ -2.18
SNX13-209ENST00000492626 LRP2P98164 4655 aa1.44□□□□□ -2.18
SNX13-209ENST00000492626 IGKV2-40A0A087WW87 121 aaPredicted RBP1.44□□□□□ -2.18
SNX13-209ENST00000492626 IGKV2D-40P01614 121 aaPredicted RBP1.44□□□□□ -2.18
SNX13-209ENST00000492626 ACYP1P07311 99 aa1.44□□□□□ -2.18
SNX13-209ENST00000492626 CNFNQ9BYD5 112 aa1.44□□□□□ -2.18
SNX13-209ENST00000492626 NCR3O14931 201 aa1.43□□□□□ -2.18
SNX13-209ENST00000492626 ERC2-IT1O76042 136 aa1.43□□□□□ -2.18
SNX13-209ENST00000492626 C10orf99Q6UWK7 81 aa1.43□□□□□ -2.18
SNX13-209ENST00000492626 SPACA4Q8TDM5 124 aa1.43□□□□□ -2.18
SNX13-209ENST00000492626 USH2AO75445 5202 aa1.43□□□□□ -2.18
SNX13-209ENST00000492626 IGKV2-29A2NJV5 120 aaPredicted RBP1.43□□□□□ -2.18
SNX13-209ENST00000492626 WT1-ASQ06250 92 aa1.43□□□□□ -2.18
SNX13-209ENST00000492626 C10orf55Q5SWW7 151 aa1.43□□□□□ -2.18
SNX13-209ENST00000492626 PLAC8Q9NZF1 115 aa1.42□□□□□ -2.18
SNX13-209ENST00000492626 NDUFA4O00483 81 aa1.42□□□□□ -2.18
SNX13-209ENST00000492626 C10orf113Q5VZT2 155 aa1.42□□□□□ -2.18
SNX13-209ENST00000492626 TRBV6-8A0A0A6YYG3 113 aa1.42□□□□□ -2.18
SNX13-209ENST00000492626 DIRC1Q969H9 104 aa1.42□□□□□ -2.18
SNX13-209ENST00000492626 TRBV6-1A0A0K0K1D8 114 aa1.41□□□□□ -2.18
SNX13-209ENST00000492626 KRTAP10-10P60014 251 aa1.41□□□□□ -2.18
SNX13-209ENST00000492626 PP632Q6XCG6 107 aa1.41□□□□□ -2.18
SNX13-209ENST00000492626 LINC01556Q5JQF7 62 aa1.41□□□□□ -2.18
SNX13-209ENST00000492626 SMIM2Q9BVW6 85 aa1.41□□□□□ -2.18
SNX13-209ENST00000492626 ORMDL1Q9P0S3 153 aa1.41□□□□□ -2.18
SNX13-209ENST00000492626 IGKV3OR2-268A0A0C4DH90 116 aa1.41□□□□□ -2.18
SNX13-209ENST00000492626 APELAP0DMC3 54 aa1.41□□□□□ -2.18
SNX13-209ENST00000492626 TMEM14CQ9P0S9 112 aa1.41□□□□□ -2.18
SNX13-209ENST00000492626 SAA1P0DJI8 122 aaPredicted RBP1.4□□□□□ -2.18
SNX13-209ENST00000492626 PRCDQ00LT1 54 aa1.4□□□□□ -2.18
SNX13-209ENST00000492626 PLGLAQ15195 96 aa1.4□□□□□ -2.18
SNX13-209ENST00000492626 PSMG4Q5JS54 123 aa1.4□□□□□ -2.18
SNX13-209ENST00000492626 C1orf137Q5JT78 98 aa1.4□□□□□ -2.18
SNX13-209ENST00000492626 KRTAP5-10Q6L8G5 202 aa1.4□□□□□ -2.18
SNX13-209ENST00000492626 LINC00269Q8N2A0 174 aa1.4□□□□□ -2.18
SNX13-209ENST00000492626 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.4□□□□□ -2.19
SNX13-209ENST00000492626 ZNF833PQ6ZTB9 187 aa1.4□□□□□ -2.19
SNX13-209ENST00000492626 KRTAP5-2Q701N4 177 aa1.4□□□□□ -2.19
SNX13-209ENST00000492626 HCG22E2RYF7 251 aa1.4□□□□□ -2.19
SNX13-209ENST00000492626 SAA2P0DJI9 122 aaPredicted RBP1.4□□□□□ -2.19
SNX13-209ENST00000492626 PDE6HQ13956 83 aa1.4□□□□□ -2.19
SNX13-209ENST00000492626 KRTAP5-4Q6L8H1 288 aa1.4□□□□□ -2.19
SNX13-209ENST00000492626 NDUFA4L2Q9NRX3 87 aa1.4□□□□□ -2.19
SNX13-209ENST00000492626 RPS29P62273 56 aaKnown RBP1.4□□□□□ -2.19
SNX13-209ENST00000492626 CCL3L1P16619 93 aa1.39□□□□□ -2.19
SNX13-209ENST00000492626 DEFB1P60022 68 aa1.39□□□□□ -2.19
SNX13-209ENST00000492626 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.39□□□□□ -2.19
SNX13-209ENST00000492626 CASC2Q6XLA1 102 aa1.39□□□□□ -2.19
SNX13-209ENST00000492626 SPTSSBQ8NFR3 76 aa1.39□□□□□ -2.19
SNX13-209ENST00000492626 NDUFA12Q9UI09 145 aa1.39□□□□□ -2.19
SNX13-209ENST00000492626 IGKV3-7A0A075B6H7 116 aa1.39□□□□□ -2.19
SNX13-209ENST00000492626 ZCCHC13Q8WW36 166 aaKnown RBP1.39□□□□□ -2.19
SNX13-209ENST00000492626 FLGP20930 4061 aaPredicted RBP1.39□□□□□ -2.19
SNX13-209ENST00000492626 COX6A2Q02221 97 aa1.39□□□□□ -2.19
SNX13-209ENST00000492626 SPAG11AQ6PDA7 123 aa1.39□□□□□ -2.19
SNX13-209ENST00000492626 LINC00308Q8TCZ7 52 aa1.39□□□□□ -2.19
SNX13-209ENST00000492626 TMEM141Q96I45 108 aa1.39□□□□□ -2.19
SNX13-209ENST00000492626 LCE3DQ9BYE3 92 aa1.39□□□□□ -2.19
SNX13-209ENST00000492626 CDC42SE1Q9NRR8 79 aa1.39□□□□□ -2.19
SNX13-209ENST00000492626 DNAL4O96015 105 aa1.38□□□□□ -2.19
SNX13-209ENST00000492626 POLR2KP53803 58 aaKnown RBP1.38□□□□□ -2.19
SNX13-209ENST00000492626 SPINK7P58062 85 aa1.38□□□□□ -2.19
SNX13-209ENST00000492626 NREPQ16612 68 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms