RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 PSPHP1O15172 72 aa7.98□□□□□ -1.13
HDAC3-213ENST00000492506 C7orf65Q6ZTY9 151 aa7.97□□□□□ -1.13
HDAC3-213ENST00000492506 SMIM29Q86T20 159 aa7.97□□□□□ -1.13
HDAC3-213ENST00000492506 HCG22E2RYF7 251 aa7.96□□□□□ -1.14
HDAC3-213ENST00000492506 KRTAP9-6A0A140TA67 174 aa7.95□□□□□ -1.14
HDAC3-213ENST00000492506 A8MUN3 132 aa7.95□□□□□ -1.14
HDAC3-213ENST00000492506 CHKB-CPT1BH3BT56 60 aa7.95□□□□□ -1.14
HDAC3-213ENST00000492506 PSORS1C2Q9UIG4 136 aa7.95□□□□□ -1.14
HDAC3-213ENST00000492506 IGLV5-48A0A075B6I7 105 aa7.94□□□□□ -1.14
HDAC3-213ENST00000492506 LOC101927531A0A1B0GV80 90 aa7.94□□□□□ -1.14
HDAC3-213ENST00000492506 A0A1W2PNN7 141 aa7.94□□□□□ -1.14
HDAC3-213ENST00000492506 SPAG11BQ08648 103 aa7.94□□□□□ -1.14
HDAC3-213ENST00000492506 LCE2AQ5TA79 106 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-213ENST00000492506 PRR26Q8N8Z3 221 aa7.94□□□□□ -1.14
HDAC3-213ENST00000492506 KCNQ1DNQ9H478 68 aa7.94□□□□□ -1.14
HDAC3-213ENST00000492506 LCA10Q71F78 164 aa7.93□□□□□ -1.14
HDAC3-213ENST00000492506 CDC42SE1Q9NRR8 79 aa7.93□□□□□ -1.14
HDAC3-213ENST00000492506 A6NN06 94 aa7.92□□□□□ -1.14
HDAC3-213ENST00000492506 LINC00208Q96KT6 92 aa7.92□□□□□ -1.14
HDAC3-213ENST00000492506 Q8N9P0 234 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-213ENST00000492506 C4orf48Q5BLP8 95 aa7.9□□□□□ -1.14
HDAC3-213ENST00000492506 Q8N9L7 120 aa7.9□□□□□ -1.14
HDAC3-213ENST00000492506 C9orf116Q5BN46 136 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-213ENST00000492506 C1orf137Q5JT78 98 aa7.89□□□□□ -1.15
HDAC3-213ENST00000492506 C10orf25Q5T742 122 aa7.89□□□□□ -1.15
HDAC3-213ENST00000492506 ASB16-AS1Q495Z4 193 aa7.88□□□□□ -1.15
HDAC3-213ENST00000492506 Q8NBF4 154 aa7.88□□□□□ -1.15
HDAC3-213ENST00000492506 Q8NDZ9 215 aa7.88□□□□□ -1.15
HDAC3-213ENST00000492506 DHRS4-AS1Q9P1J3 65 aa7.88□□□□□ -1.15
HDAC3-213ENST00000492506 IGLV7-43P04211 117 aa7.87□□□□□ -1.15
HDAC3-213ENST00000492506 KRTAP1-4P0C5Y4 121 aa7.87□□□□□ -1.15
HDAC3-213ENST00000492506 SPRR4Q96PI1 79 aa7.87□□□□□ -1.15
HDAC3-213ENST00000492506 PRR15LQ9BU68 103 aa7.87□□□□□ -1.15
HDAC3-213ENST00000492506 A0A087X002 238 aa7.86□□□□□ -1.15
HDAC3-213ENST00000492506 A6NED7 52 aa7.86□□□□□ -1.15
HDAC3-213ENST00000492506 H0Y9J4 135 aa7.86□□□□□ -1.15
HDAC3-213ENST00000492506 KRTAP11-1Q8IUC1 163 aa7.86□□□□□ -1.15
HDAC3-213ENST00000492506 PRR4Q16378 134 aa7.85□□□□□ -1.15
HDAC3-213ENST00000492506 IGLV1-50A0A075B6I6 118 aa7.84□□□□□ -1.15
HDAC3-213ENST00000492506 UNQ6190/PRO20217Q6UXQ8 127 aa7.84□□□□□ -1.15
HDAC3-213ENST00000492506 SPTSSBQ8NFR3 76 aa7.83□□□□□ -1.16
HDAC3-213ENST00000492506 CAMK2N2Q96S95 79 aa7.82□□□□□ -1.16
HDAC3-213ENST00000492506 NKAPP1Q8N9T2 125 aa7.81□□□□□ -1.16
HDAC3-213ENST00000492506 DSCR10P59022 87 aa7.8□□□□□ -1.16
HDAC3-213ENST00000492506 LINC01558Q9Y6Z2 57 aa7.8□□□□□ -1.16
HDAC3-213ENST00000492506 MUC17Q685J3 4493 aa7.8□□□□□ -1.16
HDAC3-213ENST00000492506 FAM168BA1KXE4 195 aa7.79□□□□□ -1.16
HDAC3-213ENST00000492506 KRTAP7-1Q8IUC3 87 aa7.78□□□□□ -1.16
HDAC3-213ENST00000492506 C6orf48Q9UBA6 75 aa7.78□□□□□ -1.16
HDAC3-213ENST00000492506 A0A1W2PNM2 257 aa7.77□□□□□ -1.17
HDAC3-213ENST00000492506 Q8N377 158 aa7.77□□□□□ -1.17
HDAC3-213ENST00000492506 C8orf87E5RJ46 101 aa7.76□□□□□ -1.17
HDAC3-213ENST00000492506 CASC2Q6XLA1 102 aa7.76□□□□□ -1.17
HDAC3-213ENST00000492506 ST20-AS1Q8NBB2 130 aa7.76□□□□□ -1.17
HDAC3-213ENST00000492506 H0Y9P7 68 aa7.75□□□□□ -1.17
HDAC3-213ENST00000492506 K7EQZ3 153 aa7.75□□□□□ -1.17
HDAC3-213ENST00000492506 IGLV7-46A0A075B6I9 117 aa7.74□□□□□ -1.17
HDAC3-213ENST00000492506 TLX1NBP0CAT3 122 aa7.73□□□□□ -1.17
HDAC3-213ENST00000492506 COA5Q86WW8 74 aa7.72□□□□□ -1.17
HDAC3-213ENST00000492506 XAGE1AQ9HD64 81 aa7.71□□□□□ -1.18
HDAC3-213ENST00000492506 RPL37AP8A6NKH3 93 aa7.7□□□□□ -1.18
HDAC3-213ENST00000492506 MOBPQ13875 183 aa7.7□□□□□ -1.18
HDAC3-213ENST00000492506 IGLV5-37A0A075B6J1 123 aa7.69□□□□□ -1.18
HDAC3-213ENST00000492506 Q6ZRX8 168 aa7.69□□□□□ -1.18
HDAC3-213ENST00000492506 ZNF861PO60384 105 aa7.67□□□□□ -1.18
HDAC3-213ENST00000492506 SPRR1AP35321 89 aa7.66□□□□□ -1.18
HDAC3-213ENST00000492506 TP53AIP1Q9HCN2 124 aa7.66□□□□□ -1.18
HDAC3-213ENST00000492506 FSIP2Q5CZC0 6907 aa7.66□□□□□ -1.18
HDAC3-213ENST00000492506 IGLV8-61A0A075B6I0 122 aa7.65□□□□□ -1.18
HDAC3-213ENST00000492506 A8MU10 97 aa7.65□□□□□ -1.18
HDAC3-213ENST00000492506 DEFB105AQ8NG35 78 aa7.65□□□□□ -1.18
HDAC3-213ENST00000492506 LINC01554Q52M75 96 aa7.62□□□□□ -1.19
HDAC3-213ENST00000492506 LCE2DQ5TA82 110 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-213ENST00000492506 WFDC13Q8IUB5 93 aa7.61□□□□□ -1.19
HDAC3-213ENST00000492506 RETNLBQ9BQ08 111 aa7.61□□□□□ -1.19
HDAC3-213ENST00000492506 KRTAP4-16G5E9R7 235 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-213ENST00000492506 TPRXLQ17RH7 258 aa7.6□□□□□ -1.19
HDAC3-213ENST00000492506 TYMSOSQ8TAI1 123 aa7.6□□□□□ -1.19
HDAC3-213ENST00000492506 A8MWP4 228 aa7.59□□□□□ -1.19
HDAC3-213ENST00000492506 KRTAP13-2Q52LG2 175 aa7.59□□□□□ -1.19
HDAC3-213ENST00000492506 ANAPC11Q9NYG5 84 aa7.57□□□□□ -1.2
HDAC3-213ENST00000492506 CRCT1Q9UGL9 99 aa7.57□□□□□ -1.2
HDAC3-213ENST00000492506 H3BS24 57 aa7.56□□□□□ -1.2
HDAC3-213ENST00000492506 LINC00313P59037 77 aa7.55□□□□□ -1.2
HDAC3-213ENST00000492506 IGFL1Q6UW32 110 aa7.52□□□□□ -1.21
HDAC3-213ENST00000492506 KRTAP13-1Q8IUC0 172 aa7.52□□□□□ -1.21
HDAC3-213ENST00000492506 LINC00304Q8N9R0 145 aa7.52□□□□□ -1.21
HDAC3-213ENST00000492506 SPAG11AQ6PDA7 123 aa7.5□□□□□ -1.21
HDAC3-213ENST00000492506 A0A087WSZ3 146 aa7.49□□□□□ -1.21
HDAC3-213ENST00000492506 SPINK7P58062 85 aa7.48□□□□□ -1.21
HDAC3-213ENST00000492506 KRTAP4-1Q9BYQ7 146 aa7.48□□□□□ -1.21
HDAC3-213ENST00000492506 MMP24-AS1A0A0U1RRL7 71 aa7.45□□□□□ -1.22
HDAC3-213ENST00000492506 SPRR1BP22528 89 aa7.45□□□□□ -1.22
HDAC3-213ENST00000492506 LINC00472Q9H8W2 130 aa7.45□□□□□ -1.22
HDAC3-213ENST00000492506 HRES1P13985 223 aa7.42□□□□□ -1.22
HDAC3-213ENST00000492506 DEFB116Q30KQ4 102 aa7.42□□□□□ -1.22
HDAC3-213ENST00000492506 KRTAP13-3Q3SY46 172 aa7.42□□□□□ -1.22
HDAC3-213ENST00000492506 SPATA8Q6RVD6 105 aa7.42□□□□□ -1.22
HDAC3-213ENST00000492506 ACYP2P14621 99 aa7.4□□□□□ -1.22
HDAC3-213ENST00000492506 PRLHP81277 87 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms