RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 FAM30AQ9NZY2 134 aa7.14□□□□□ -1.27
SRGAP3-210ENST00000491467 TNXBP22105 4242 aa7.13□□□□□ -1.27
SRGAP3-210ENST00000491467 HCG22E2RYF7 251 aa7.13□□□□□ -1.27
SRGAP3-210ENST00000491467 K7EQZ3 153 aa7.13□□□□□ -1.27
SRGAP3-210ENST00000491467 A0A0U1RQV1 116 aa7.12□□□□□ -1.27
SRGAP3-210ENST00000491467 A8MWP4 228 aa7.12□□□□□ -1.27
SRGAP3-210ENST00000491467 NDUFB1O75438 58 aa7.12□□□□□ -1.27
SRGAP3-210ENST00000491467 C20orf197Q8N268 126 aa7.12□□□□□ -1.27
SRGAP3-210ENST00000491467 PRR15Q8IV56 129 aa7.11□□□□□ -1.27
SRGAP3-210ENST00000491467 MOBPQ13875 183 aa7.1□□□□□ -1.27
SRGAP3-210ENST00000491467 FAM229BQ4G0N7 80 aa7.1□□□□□ -1.27
SRGAP3-210ENST00000491467 C5orf47Q569G3 176 aa7.08□□□□□ -1.28
SRGAP3-210ENST00000491467 RPS28P62857 69 aaKnown RBP7.07□□□□□ -1.28
SRGAP3-210ENST00000491467 TMEM254Q8TBM7 123 aa7.07□□□□□ -1.28
SRGAP3-210ENST00000491467 DEFB116Q30KQ4 102 aa7.06□□□□□ -1.28
SRGAP3-210ENST00000491467 ASB16-AS1Q495Z4 193 aa7.06□□□□□ -1.28
SRGAP3-210ENST00000491467 LCE2AQ5TA79 106 aaPredicted RBP7.06□□□□□ -1.28
SRGAP3-210ENST00000491467 Q96NJ1 140 aa7.05□□□□□ -1.28
SRGAP3-210ENST00000491467 H7BZZ5 65 aa7.04□□□□□ -1.28
SRGAP3-210ENST00000491467 ATP5EP56381 51 aaPredicted RBP7.04□□□□□ -1.28
SRGAP3-210ENST00000491467 CASC2Q6XLA1 102 aa7.04□□□□□ -1.28
SRGAP3-210ENST00000491467 CYSTM1Q9H1C7 97 aa7.04□□□□□ -1.28
SRGAP3-210ENST00000491467 KRTAP9-7A8MTY7 169 aa7.03□□□□□ -1.28
SRGAP3-210ENST00000491467 H3BPC8 53 aa7.02□□□□□ -1.29
SRGAP3-210ENST00000491467 MT1HL1P0DM35 61 aa7.02□□□□□ -1.29
SRGAP3-210ENST00000491467 Q5XG85 94 aa7.02□□□□□ -1.29
SRGAP3-210ENST00000491467 ANAPC11Q9NYG5 84 aa7.02□□□□□ -1.29
SRGAP3-210ENST00000491467 HRCT1Q6UXD1 115 aa7.01□□□□□ -1.29
SRGAP3-210ENST00000491467 WFDC13Q8IUB5 93 aa7.01□□□□□ -1.29
SRGAP3-210ENST00000491467 SNURFQ9Y675 71 aa7.01□□□□□ -1.29
SRGAP3-210ENST00000491467 MMP24-AS1A0A0U1RRL7 71 aa6.99□□□□□ -1.29
SRGAP3-210ENST00000491467 A0A1B0GVX0 72 aa6.99□□□□□ -1.29
SRGAP3-210ENST00000491467 LCE2DQ5TA82 110 aaPredicted RBP6.99□□□□□ -1.29
SRGAP3-210ENST00000491467 SPINK6Q6UWN8 80 aa6.99□□□□□ -1.29
SRGAP3-210ENST00000491467 TP53AIP1Q9HCN2 124 aa6.99□□□□□ -1.29
SRGAP3-210ENST00000491467 DNAH8Q96JB1 4490 aa6.98□□□□□ -1.29
SRGAP3-210ENST00000491467 FAM236DA0A1B0GTK5 79 aa6.98□□□□□ -1.29
SRGAP3-210ENST00000491467 hDV103S1A0JD37 113 aa6.98□□□□□ -1.29
SRGAP3-210ENST00000491467 FAM236CP0DP71 79 aa6.98□□□□□ -1.29
SRGAP3-210ENST00000491467 MP68P56378 58 aa6.98□□□□□ -1.29
SRGAP3-210ENST00000491467 C8orf17Q9NRJ1 99 aa6.97□□□□□ -1.29
SRGAP3-210ENST00000491467 KRTAP10-4P60372 401 aaPredicted RBP6.96□□□□□ -1.3
SRGAP3-210ENST00000491467 ZCCHC13Q8WW36 166 aaKnown RBP6.96□□□□□ -1.3
SRGAP3-210ENST00000491467 LPAP08519 4548 aa6.96□□□□□ -1.3
SRGAP3-210ENST00000491467 C8orf87E5RJ46 101 aa6.95□□□□□ -1.3
SRGAP3-210ENST00000491467 LIMD2Q9BT23 127 aa6.95□□□□□ -1.3
SRGAP3-210ENST00000491467 KRTAP1-4P0C5Y4 121 aa6.94□□□□□ -1.3
SRGAP3-210ENST00000491467 KRTAP13-2Q52LG2 175 aa6.94□□□□□ -1.3
SRGAP3-210ENST00000491467 A0A087X002 238 aa6.93□□□□□ -1.3
SRGAP3-210ENST00000491467 SERP1Q9Y6X1 66 aa6.93□□□□□ -1.3
SRGAP3-210ENST00000491467 IGHV6-1A0A0B4J1U7 121 aa6.91□□□□□ -1.3
SRGAP3-210ENST00000491467 C4orf48Q5BLP8 95 aa6.91□□□□□ -1.3
SRGAP3-210ENST00000491467 MRPL34Q9BQ48 92 aaKnown RBP6.91□□□□□ -1.3
SRGAP3-210ENST00000491467 H0Y9P7 68 aa6.9□□□□□ -1.3
SRGAP3-210ENST00000491467 SPINK1P00995 79 aa6.9□□□□□ -1.3
SRGAP3-210ENST00000491467 RPS29P62273 56 aaKnown RBP6.9□□□□□ -1.3
SRGAP3-210ENST00000491467 TRAV22A0A0B4J277 110 aa6.89□□□□□ -1.31
SRGAP3-210ENST00000491467 SPAG11AQ6PDA7 123 aa6.89□□□□□ -1.31
SRGAP3-210ENST00000491467 TYMSOSQ8TAI1 123 aa6.89□□□□□ -1.31
SRGAP3-210ENST00000491467 LINC00208Q96KT6 92 aa6.88□□□□□ -1.31
SRGAP3-210ENST00000491467 C1orf195Q5TG92 126 aa6.86□□□□□ -1.31
SRGAP3-210ENST00000491467 SPANXA2-OT1Q8N9U9 137 aa6.85□□□□□ -1.31
SRGAP3-210ENST00000491467 LINC00313P59037 77 aa6.84□□□□□ -1.31
SRGAP3-210ENST00000491467 C1orf64Q8NEQ6 169 aa6.84□□□□□ -1.31
SRGAP3-210ENST00000491467 CYP4F30PQ9H0H9 118 aa6.84□□□□□ -1.31
SRGAP3-210ENST00000491467 NDUFS5O43920 106 aa6.82□□□□□ -1.32
SRGAP3-210ENST00000491467 SMIM26A0A096LP01 95 aa6.8□□□□□ -1.32
SRGAP3-210ENST00000491467 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.8□□□□□ -1.32
SRGAP3-210ENST00000491467 NOTCH2NLQ7Z3S9 236 aa6.8□□□□□ -1.32
SRGAP3-210ENST00000491467 LINC00304Q8N9R0 145 aa6.8□□□□□ -1.32
SRGAP3-210ENST00000491467 PRR26Q8N8Z3 221 aa6.77□□□□□ -1.33
SRGAP3-210ENST00000491467 Q8N9P0 234 aaPredicted RBP6.77□□□□□ -1.33
SRGAP3-210ENST00000491467 LOC101927531A0A1B0GV80 90 aa6.76□□□□□ -1.33
SRGAP3-210ENST00000491467 IGLV7-46A0A075B6I9 117 aa6.74□□□□□ -1.33
SRGAP3-210ENST00000491467 KRTAP13-3Q3SY46 172 aa6.72□□□□□ -1.33
SRGAP3-210ENST00000491467 KRTAP16-1A8MUX0 517 aa6.71□□□□□ -1.34
SRGAP3-210ENST00000491467 Q5W150 140 aa6.68□□□□□ -1.34
SRGAP3-210ENST00000491467 PCOTHQ58A44 107 aa6.64□□□□□ -1.35
SRGAP3-210ENST00000491467 IGKV2-30P06310 120 aa6.63□□□□□ -1.35
SRGAP3-210ENST00000491467 FP248Q71RG6 208 aaPredicted RBP6.63□□□□□ -1.35
SRGAP3-210ENST00000491467 SVIPQ8NHG7 77 aa6.63□□□□□ -1.35
SRGAP3-210ENST00000491467 V9GYY9 64 aa6.63□□□□□ -1.35
SRGAP3-210ENST00000491467 PRR4Q16378 134 aa6.62□□□□□ -1.35
SRGAP3-210ENST00000491467 Q1T7F1 81 aa6.61□□□□□ -1.35
SRGAP3-210ENST00000491467 KRTAP10-8P60410 259 aa6.6□□□□□ -1.35
SRGAP3-210ENST00000491467 C4orf26Q17RF5 130 aa6.58□□□□□ -1.36
SRGAP3-210ENST00000491467 ACYP2P14621 99 aa6.57□□□□□ -1.36
SRGAP3-210ENST00000491467 COA5Q86WW8 74 aa6.57□□□□□ -1.36
SRGAP3-210ENST00000491467 A8MUU9 505 aa6.56□□□□□ -1.36
SRGAP3-210ENST00000491467 C20orf166-AS1Q96NR2 134 aa6.56□□□□□ -1.36
SRGAP3-210ENST00000491467 HRES1P13985 223 aa6.54□□□□□ -1.36
SRGAP3-210ENST00000491467 MPLKIPQ8TAP9 179 aa6.52□□□□□ -1.37
SRGAP3-210ENST00000491467 DMAC1Q96GE9 116 aa6.52□□□□□ -1.37
SRGAP3-210ENST00000491467 C7orf65Q6ZTY9 151 aa6.51□□□□□ -1.37
SRGAP3-210ENST00000491467 RETNLBQ9BQ08 111 aa6.51□□□□□ -1.37
SRGAP3-210ENST00000491467 IGKV2D-30A0A075B6S6 120 aa6.48□□□□□ -1.37
SRGAP3-210ENST00000491467 Q75L30 129 aa6.48□□□□□ -1.37
SRGAP3-210ENST00000491467 C9orf92A6NGG3 77 aa6.46□□□□□ -1.38
SRGAP3-210ENST00000491467 A8MUN3 132 aa6.45□□□□□ -1.38
SRGAP3-210ENST00000491467 LINC01558Q9Y6Z2 57 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms