RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 H3BMG7 143 aa4.33□□□□□ -1.72
LSM2-213ENST00000491421 KRTAP10-6P60371 365 aaPredicted RBP4.33□□□□□ -1.72
LSM2-213ENST00000491421 NOTCH2NLQ7Z3S9 236 aa4.33□□□□□ -1.72
LSM2-213ENST00000491421 ANKRD29Q8N6D5 301 aa4.33□□□□□ -1.72
LSM2-213ENST00000491421 Q96NJ1 140 aa4.33□□□□□ -1.72
LSM2-213ENST00000491421 C8orf87E5RJ46 101 aa4.32□□□□□ -1.72
LSM2-213ENST00000491421 FXYD2P54710 66 aa4.32□□□□□ -1.72
LSM2-213ENST00000491421 PSPHP1O15172 72 aa4.3□□□□□ -1.72
LSM2-213ENST00000491421 DNAL4O96015 105 aa4.3□□□□□ -1.72
LSM2-213ENST00000491421 CRCT1Q9UGL9 99 aa4.3□□□□□ -1.72
LSM2-213ENST00000491421 K7ERJ3 54 aa4.29□□□□□ -1.72
LSM2-213ENST00000491421 HSD52Q0P140 79 aa4.29□□□□□ -1.72
LSM2-213ENST00000491421 C20orf166-AS1Q96NR2 134 aa4.29□□□□□ -1.72
LSM2-213ENST00000491421 ORMDL1Q9P0S3 153 aa4.29□□□□□ -1.72
LSM2-213ENST00000491421 FLGP20930 4061 aaPredicted RBP4.29□□□□□ -1.72
LSM2-213ENST00000491421 SMIM26A0A096LP01 95 aa4.28□□□□□ -1.72
LSM2-213ENST00000491421 A0A1W2PNM2 257 aa4.28□□□□□ -1.72
LSM2-213ENST00000491421 A8MUU9 505 aa4.28□□□□□ -1.72
LSM2-213ENST00000491421 ANAPC13Q9BS18 74 aa4.28□□□□□ -1.72
LSM2-213ENST00000491421 H3BQ85 93 aa4.27□□□□□ -1.73
LSM2-213ENST00000491421 COX6CP09669 75 aa4.27□□□□□ -1.73
LSM2-213ENST00000491421 DSCR10P59022 87 aa4.27□□□□□ -1.73
LSM2-213ENST00000491421 PYY3Q5JQD4 70 aa4.27□□□□□ -1.73
LSM2-213ENST00000491421 KRTAP19-1Q8IUB9 90 aa4.27□□□□□ -1.73
LSM2-213ENST00000491421 TRBV7-4A0A0J9YYF1 115 aa4.26□□□□□ -1.73
LSM2-213ENST00000491421 TMEM256-PLSCR3K7ERE1 68 aa4.25□□□□□ -1.73
LSM2-213ENST00000491421 IGKV4-1P06312 121 aa4.25□□□□□ -1.73
LSM2-213ENST00000491421 MP68P56378 58 aa4.25□□□□□ -1.73
LSM2-213ENST00000491421 KRTAP9-9Q9BYP9 154 aa4.25□□□□□ -1.73
LSM2-213ENST00000491421 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
LSM2-213ENST00000491421 OCR1Q9BZK8 76 aa4.25□□□□□ -1.73
LSM2-213ENST00000491421 RBM12B-AS1Q9P1G2 102 aa4.25□□□□□ -1.73
LSM2-213ENST00000491421 TRBV20-1A0A075B6N2 111 aa4.24□□□□□ -1.73
LSM2-213ENST00000491421 C9JAW5 83 aa4.24□□□□□ -1.73
LSM2-213ENST00000491421 J3QR89 54 aa4.24□□□□□ -1.73
LSM2-213ENST00000491421 TRACP01848 142 aa4.24□□□□□ -1.73
LSM2-213ENST00000491421 CCKP06307 115 aa4.24□□□□□ -1.73
LSM2-213ENST00000491421 LINC00313P59037 77 aa4.24□□□□□ -1.73
LSM2-213ENST00000491421 UQCR10Q9UDW1 63 aa4.24□□□□□ -1.73
LSM2-213ENST00000491421 IGHV6-1A0A0B4J1U7 121 aa4.23□□□□□ -1.73
LSM2-213ENST00000491421 M0R143 59 aa4.23□□□□□ -1.73
LSM2-213ENST00000491421 SCGB1C2P0DMR2 95 aa4.23□□□□□ -1.73
LSM2-213ENST00000491421 PRAC1Q96KF2 57 aa4.23□□□□□ -1.73
LSM2-213ENST00000491421 KRTAP4-8A0A0G2JLE6 195 aa4.22□□□□□ -1.73
LSM2-213ENST00000491421 DEFB116Q30KQ4 102 aa4.22□□□□□ -1.73
LSM2-213ENST00000491421 LYRM7Q5U5X0 104 aa4.22□□□□□ -1.73
LSM2-213ENST00000491421 KRTAP16-1A8MUX0 517 aa4.21□□□□□ -1.74
LSM2-213ENST00000491421 LINC00472Q9H8W2 130 aa4.21□□□□□ -1.74
LSM2-213ENST00000491421 RBM3P98179 157 aaKnown RBP4.19□□□□□ -1.74
LSM2-213ENST00000491421 DSCR8Q96T75 97 aa4.19□□□□□ -1.74
LSM2-213ENST00000491421 IMUPQ9GZP8 106 aa4.18□□□□□ -1.74
LSM2-213ENST00000491421 A0A1B0GVX0 72 aa4.17□□□□□ -1.74
LSM2-213ENST00000491421 BAALC-AS2P0C853 105 aa4.17□□□□□ -1.74
LSM2-213ENST00000491421 HRES1P13985 223 aa4.15□□□□□ -1.75
LSM2-213ENST00000491421 KRTAP9-8Q9BYQ0 159 aa4.15□□□□□ -1.75
LSM2-213ENST00000491421 Q6ZQT0 140 aa4.14□□□□□ -1.75
LSM2-213ENST00000491421 ATXN8Q156A1 80 aa4.13□□□□□ -1.75
LSM2-213ENST00000491421 NDUFB1O75438 58 aa4.12□□□□□ -1.75
LSM2-213ENST00000491421 GTF2H5Q6ZYL4 71 aa4.12□□□□□ -1.75
LSM2-213ENST00000491421 ZCCHC13Q8WW36 166 aaKnown RBP4.12□□□□□ -1.75
LSM2-213ENST00000491421 NAA38Q9BRA0 125 aaKnown RBP4.12□□□□□ -1.75
LSM2-213ENST00000491421 JMJD7-PLA2G4BH0Y9G9 81 aa4.11□□□□□ -1.75
LSM2-213ENST00000491421 COL5A1-AS1Q5SY13 56 aa4.11□□□□□ -1.75
LSM2-213ENST00000491421 USH2AO75445 5202 aa4.11□□□□□ -1.75
LSM2-213ENST00000491421 LOC110117498A0A087WWA1 95 aa4.1□□□□□ -1.75
LSM2-213ENST00000491421 MT2AP02795 61 aa4.1□□□□□ -1.75
LSM2-213ENST00000491421 SSPOA2VEC9 5147 aa4.09□□□□□ -1.75
LSM2-213ENST00000491421 A0A1B0GW54 56 aa4.09□□□□□ -1.75
LSM2-213ENST00000491421 A8MUN3 132 aa4.09□□□□□ -1.75
LSM2-213ENST00000491421 A8MWP4 228 aa4.09□□□□□ -1.75
LSM2-213ENST00000491421 PDE6GP18545 87 aa4.09□□□□□ -1.75
LSM2-213ENST00000491421 SPINK7P58062 85 aa4.09□□□□□ -1.75
LSM2-213ENST00000491421 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
LSM2-213ENST00000491421 PRR15Q8IV56 129 aa4.09□□□□□ -1.75
LSM2-213ENST00000491421 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
LSM2-213ENST00000491421 Q8N9P0 234 aaPredicted RBP4.08□□□□□ -1.76
LSM2-213ENST00000491421 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
LSM2-213ENST00000491421 C14orf132Q9NPU4 83 aa4.08□□□□□ -1.76
LSM2-213ENST00000491421 C8orf17Q9NRJ1 99 aa4.08□□□□□ -1.76
LSM2-213ENST00000491421 IGKV3D-7A0A0C4DH55 119 aa4.07□□□□□ -1.76
LSM2-213ENST00000491421 MT1FP04733 61 aa4.07□□□□□ -1.76
LSM2-213ENST00000491421 KRTAP10-10P60014 251 aa4.06□□□□□ -1.76
LSM2-213ENST00000491421 CXCL6P80162 114 aa4.06□□□□□ -1.76
LSM2-213ENST00000491421 TAX1BP3O14907 124 aa4.05□□□□□ -1.76
LSM2-213ENST00000491421 NREPQ16612 68 aa4.05□□□□□ -1.76
LSM2-213ENST00000491421 LCA10Q71F78 164 aa4.05□□□□□ -1.76
LSM2-213ENST00000491421 WFDC13Q8IUB5 93 aa4.04□□□□□ -1.76
LSM2-213ENST00000491421 CAMK2N1Q7Z7J9 78 aa4.03□□□□□ -1.76
LSM2-213ENST00000491421 BRK1Q8WUW1 75 aa4.02□□□□□ -1.77
LSM2-213ENST00000491421 KRTAP9-3Q9BYQ3 159 aa4.02□□□□□ -1.77
LSM2-213ENST00000491421 MMP24-AS1A0A0U1RRL7 71 aa4.01□□□□□ -1.77
LSM2-213ENST00000491421 TMEM254Q8TBM7 123 aa4.01□□□□□ -1.77
LSM2-213ENST00000491421 MRPL34Q9BQ48 92 aaKnown RBP4.01□□□□□ -1.77
LSM2-213ENST00000491421 H3BT86 120 aa4□□□□□ -1.77
LSM2-213ENST00000491421 K7EQZ3 153 aa4□□□□□ -1.77
LSM2-213ENST00000491421 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
LSM2-213ENST00000491421 A0A1W2PPM0 123 aa3.99□□□□□ -1.77
LSM2-213ENST00000491421 hDV103S1A0JD37 113 aa3.99□□□□□ -1.77
LSM2-213ENST00000491421 FAM236AA0A1B0GUQ0 79 aa3.98□□□□□ -1.77
LSM2-213ENST00000491421 FAM236BA0A1B0GV22 79 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms