RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 IGKV4-1P06312 121 aa8.08□□□□□ -1.12
SMPD4-219ENST00000491128 KLKP1Q107X0 134 aa8.08□□□□□ -1.12
SMPD4-219ENST00000491128 LINC00472Q9H8W2 130 aa8.08□□□□□ -1.12
SMPD4-219ENST00000491128 Q96NJ1 140 aa8.07□□□□□ -1.12
SMPD4-219ENST00000491128 SNURFQ9Y675 71 aa8.07□□□□□ -1.12
SMPD4-219ENST00000491128 SMIM26A0A096LP01 95 aa8.05□□□□□ -1.12
SMPD4-219ENST00000491128 FP248Q71RG6 208 aaPredicted RBP8.04□□□□□ -1.12
SMPD4-219ENST00000491128 C4orf48Q5BLP8 95 aa8□□□□□ -1.13
SMPD4-219ENST00000491128 WFDC13Q8IUB5 93 aa8□□□□□ -1.13
SMPD4-219ENST00000491128 KRTAP4-5Q9BYR2 181 aa8□□□□□ -1.13
SMPD4-219ENST00000491128 TNXBP22105 4242 aa7.99□□□□□ -1.13
SMPD4-219ENST00000491128 LINC00304Q8N9R0 145 aa7.98□□□□□ -1.13
SMPD4-219ENST00000491128 CD164Q04900 197 aa7.98□□□□□ -1.13
SMPD4-219ENST00000491128 IGHV6-1A0A0B4J1U7 121 aa7.97□□□□□ -1.13
SMPD4-219ENST00000491128 A8MWP4 228 aa7.97□□□□□ -1.13
SMPD4-219ENST00000491128 NDUFC1O43677 76 aa7.97□□□□□ -1.13
SMPD4-219ENST00000491128 Q8N1X5 172 aa7.97□□□□□ -1.13
SMPD4-219ENST00000491128 NOTCH2NLQ7Z3S9 236 aa7.97□□□□□ -1.13
SMPD4-219ENST00000491128 FAT3Q8TDW7 4589 aa7.96□□□□□ -1.13
SMPD4-219ENST00000491128 ATP5EP56381 51 aaPredicted RBP7.96□□□□□ -1.13
SMPD4-219ENST00000491128 PRR15Q8IV56 129 aa7.96□□□□□ -1.13
SMPD4-219ENST00000491128 C1orf195Q5TG92 126 aa7.95□□□□□ -1.14
SMPD4-219ENST00000491128 DMBT1Q9UGM3 2413 aaPredicted RBP7.94□□□□□ -1.14
SMPD4-219ENST00000491128 RETNLBQ9BQ08 111 aa7.93□□□□□ -1.14
SMPD4-219ENST00000491128 HCG22E2RYF7 251 aa7.93□□□□□ -1.14
SMPD4-219ENST00000491128 SPINK1P00995 79 aa7.92□□□□□ -1.14
SMPD4-219ENST00000491128 TMEM254Q8TBM7 123 aa7.92□□□□□ -1.14
SMPD4-219ENST00000491128 ABCA13Q86UQ4 5058 aa7.91□□□□□ -1.14
SMPD4-219ENST00000491128 NDUFB1O75438 58 aa7.91□□□□□ -1.14
SMPD4-219ENST00000491128 BRK1Q8WUW1 75 aa7.91□□□□□ -1.14
SMPD4-219ENST00000491128 BIRC6Q9NR09 4857 aa7.89□□□□□ -1.15
SMPD4-219ENST00000491128 MMP24-AS1A0A0U1RRL7 71 aa7.89□□□□□ -1.15
SMPD4-219ENST00000491128 A0A1B0GVX0 72 aa7.89□□□□□ -1.15
SMPD4-219ENST00000491128 CASC2Q6XLA1 102 aa7.88□□□□□ -1.15
SMPD4-219ENST00000491128 LIMD2Q9BT23 127 aa7.88□□□□□ -1.15
SMPD4-219ENST00000491128 V9GYY9 64 aa7.88□□□□□ -1.15
SMPD4-219ENST00000491128 A0A0U1RQV1 116 aa7.87□□□□□ -1.15
SMPD4-219ENST00000491128 OCR1Q9BZK8 76 aa7.87□□□□□ -1.15
SMPD4-219ENST00000491128 C8orf17Q9NRJ1 99 aa7.86□□□□□ -1.15
SMPD4-219ENST00000491128 KRTAP10-8P60410 259 aa7.86□□□□□ -1.15
SMPD4-219ENST00000491128 KRTAP29-1A8MX34 341 aaPredicted RBP7.85□□□□□ -1.15
SMPD4-219ENST00000491128 ASB16-AS1Q495Z4 193 aa7.85□□□□□ -1.15
SMPD4-219ENST00000491128 hDV103S1A0JD37 113 aa7.85□□□□□ -1.15
SMPD4-219ENST00000491128 SEC61GP60059 68 aa7.85□□□□□ -1.15
SMPD4-219ENST00000491128 SPAG11AQ6PDA7 123 aa7.84□□□□□ -1.15
SMPD4-219ENST00000491128 MPLKIPQ8TAP9 179 aa7.84□□□□□ -1.15
SMPD4-219ENST00000491128 HERC2O95714 4834 aa7.82□□□□□ -1.16
SMPD4-219ENST00000491128 NDUFS5O43920 106 aa7.81□□□□□ -1.16
SMPD4-219ENST00000491128 MT1HL1P0DM35 61 aa7.81□□□□□ -1.16
SMPD4-219ENST00000491128 C9orf92A6NGG3 77 aa7.78□□□□□ -1.16
SMPD4-219ENST00000491128 LINC00313P59037 77 aa7.78□□□□□ -1.16
SMPD4-219ENST00000491128 RPS29P62273 56 aaKnown RBP7.76□□□□□ -1.17
SMPD4-219ENST00000491128 MRPL34Q9BQ48 92 aaKnown RBP7.75□□□□□ -1.17
SMPD4-219ENST00000491128 KRTAP16-1A8MUX0 517 aa7.69□□□□□ -1.18
SMPD4-219ENST00000491128 ZCCHC13Q8WW36 166 aaKnown RBP7.69□□□□□ -1.18
SMPD4-219ENST00000491128 C8orf87E5RJ46 101 aa7.69□□□□□ -1.18
SMPD4-219ENST00000491128 Q1T7F1 81 aa7.68□□□□□ -1.18
SMPD4-219ENST00000491128 C1orf64Q8NEQ6 169 aa7.68□□□□□ -1.18
SMPD4-219ENST00000491128 PCLOQ9Y6V0 5065 aa7.68□□□□□ -1.18
SMPD4-219ENST00000491128 PMAIP1Q13794 54 aa7.68□□□□□ -1.18
SMPD4-219ENST00000491128 Q5W150 140 aa7.68□□□□□ -1.18
SMPD4-219ENST00000491128 H0Y9P7 68 aa7.66□□□□□ -1.18
SMPD4-219ENST00000491128 LINC00208Q96KT6 92 aa7.66□□□□□ -1.18
SMPD4-219ENST00000491128 LPAP08519 4548 aa7.64□□□□□ -1.19
SMPD4-219ENST00000491128 TRAV22A0A0B4J277 110 aa7.63□□□□□ -1.19
SMPD4-219ENST00000491128 PRR4Q16378 134 aa7.63□□□□□ -1.19
SMPD4-219ENST00000491128 Q8N9P0 234 aaPredicted RBP7.62□□□□□ -1.19
SMPD4-219ENST00000491128 IGLV7-46A0A075B6I9 117 aa7.61□□□□□ -1.19
SMPD4-219ENST00000491128 J3QL48 77 aa7.61□□□□□ -1.19
SMPD4-219ENST00000491128 MP68P56378 58 aa7.61□□□□□ -1.19
SMPD4-219ENST00000491128 CYP4F30PQ9H0H9 118 aa7.6□□□□□ -1.19
SMPD4-219ENST00000491128 TP53AIP1Q9HCN2 124 aa7.6□□□□□ -1.19
SMPD4-219ENST00000491128 PSPHP1O15172 72 aa7.6□□□□□ -1.19
SMPD4-219ENST00000491128 HERC1Q15751 4861 aa7.56□□□□□ -1.2
SMPD4-219ENST00000491128 PCOTHQ58A44 107 aa7.56□□□□□ -1.2
SMPD4-219ENST00000491128 KRTAP13-3Q3SY46 172 aa7.55□□□□□ -1.2
SMPD4-219ENST00000491128 LRP2P98164 4655 aa7.54□□□□□ -1.2
SMPD4-219ENST00000491128 A8MUN3 132 aa7.53□□□□□ -1.2
SMPD4-219ENST00000491128 A8MU10 97 aa7.52□□□□□ -1.21
SMPD4-219ENST00000491128 IGKV2D-30A0A075B6S6 120 aa7.5□□□□□ -1.21
SMPD4-219ENST00000491128 IGKV2-30P06310 120 aa7.5□□□□□ -1.21
SMPD4-219ENST00000491128 Q5VV11 94 aa7.49□□□□□ -1.21
SMPD4-219ENST00000491128 C20orf166-AS1Q96NR2 134 aa7.49□□□□□ -1.21
SMPD4-219ENST00000491128 A8MUU9 505 aa7.49□□□□□ -1.21
SMPD4-219ENST00000491128 XP32Q5T750 250 aa7.48□□□□□ -1.21
SMPD4-219ENST00000491128 H3BPC8 53 aa7.44□□□□□ -1.22
SMPD4-219ENST00000491128 SPANXA2-OT1Q8N9U9 137 aa7.43□□□□□ -1.22
SMPD4-219ENST00000491128 LOC101927531A0A1B0GV80 90 aa7.42□□□□□ -1.22
SMPD4-219ENST00000491128 Q75L30 129 aa7.41□□□□□ -1.22
SMPD4-219ENST00000491128 KTN1-AS1Q86SY8 53 aa7.41□□□□□ -1.22
SMPD4-219ENST00000491128 CHKB-CPT1BH3BT56 60 aa7.4□□□□□ -1.22
SMPD4-219ENST00000491128 PRR15LQ9BU68 103 aa7.38□□□□□ -1.23
SMPD4-219ENST00000491128 RPL37P61927 97 aaKnown RBP7.38□□□□□ -1.23
SMPD4-219ENST00000491128 ATP11AUNQ6ZP68 121 aa7.38□□□□□ -1.23
SMPD4-219ENST00000491128 HRES1P13985 223 aa7.37□□□□□ -1.23
SMPD4-219ENST00000491128 TPRXLQ17RH7 258 aa7.36□□□□□ -1.23
SMPD4-219ENST00000491128 RBM12B-AS1Q9P1G2 102 aa7.36□□□□□ -1.23
SMPD4-219ENST00000491128 LCA10Q71F78 164 aa7.35□□□□□ -1.23
SMPD4-219ENST00000491128 SPINK7P58062 85 aa7.35□□□□□ -1.23
SMPD4-219ENST00000491128 SPTSSBQ8NFR3 76 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms