RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 TEP1Q99973 2627 aaKnown RBP1.21□□□□□ -2.22
SNRNP40-207ENST00000491106 ACANP16112 2415 aa1.21□□□□□ -2.22
SNRNP40-207ENST00000491106 SONP18583 2426 aaKnown RBP1.21□□□□□ -2.22
SNRNP40-207ENST00000491106 POLQO75417 2590 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 NBDYA0A0U1RRE5 68 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 MMP24-AS1A0A0U1RRL7 71 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 A0A1B0GVX0 72 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 A6NED7 52 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 K7EIL1 84 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 LINC00313P59037 77 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 MOBPQ13875 183 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 PRR4Q16378 134 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 LCA10Q71F78 164 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 COA5Q86WW8 74 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 KRTAP13-1Q8IUC0 172 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 UBE2DNLQ8IWF7 75 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 Q96NJ1 140 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 CDC42SE1Q9NRR8 79 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 PLAC8Q9NZF1 115 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 MYO18BQ8IUG5 2567 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 EPG5Q9HCE0 2579 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 ITPR2Q14571 2701 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 JMJD1CQ15652 2540 aa1.2□□□□□ -2.22
SNRNP40-207ENST00000491106 FLNAP21333 2647 aaKnown RBP1.19□□□□□ -2.22
SNRNP40-207ENST00000491106 CACNA1AO00555 2505 aa1.19□□□□□ -2.22
SNRNP40-207ENST00000491106 NIPBLQ6KC79 2804 aaeCLIP1.19□□□□□ -2.22
SNRNP40-207ENST00000491106 PKD1L1Q8TDX9 2849 aa1.19□□□□□ -2.22
SNRNP40-207ENST00000491106 IGHV6-1A0A0B4J1U7 121 aa1.19□□□□□ -2.22
SNRNP40-207ENST00000491106 C8orf87E5RJ46 101 aa1.19□□□□□ -2.22
SNRNP40-207ENST00000491106 PRB2P02812 416 aaPredicted RBP1.19□□□□□ -2.22
SNRNP40-207ENST00000491106 HRES1P13985 223 aa1.19□□□□□ -2.22
SNRNP40-207ENST00000491106 SPAG11AQ6PDA7 123 aa1.19□□□□□ -2.22
SNRNP40-207ENST00000491106 PP632Q6XCG6 107 aa1.19□□□□□ -2.22
SNRNP40-207ENST00000491106 PRR15LQ9BU68 103 aa1.19□□□□□ -2.22
SNRNP40-207ENST00000491106 PIEZO1Q92508 2521 aa1.19□□□□□ -2.22
SNRNP40-207ENST00000491106 ZNF462Q96JM2 2506 aa1.19□□□□□ -2.22
SNRNP40-207ENST00000491106 ANK3Q12955 4377 aaKnown RBP1.19□□□□□ -2.22
SNRNP40-207ENST00000491106 SETD2Q9BYW2 2564 aaPredicted RBP1.18□□□□□ -2.22
SNRNP40-207ENST00000491106 GCN1Q92616 2671 aaKnown RBP1.18□□□□□ -2.22
SNRNP40-207ENST00000491106 A0A087WTM6 91 aa1.18□□□□□ -2.22
SNRNP40-207ENST00000491106 NUPR2A6NF83 97 aa1.18□□□□□ -2.22
SNRNP40-207ENST00000491106 CHTF8P0CG12 524 aa1.18□□□□□ -2.22
SNRNP40-207ENST00000491106 KRTAP10-1P60331 282 aa1.18□□□□□ -2.22
SNRNP40-207ENST00000491106 PCOTHQ58A44 107 aa1.18□□□□□ -2.22
SNRNP40-207ENST00000491106 SPATA8Q6RVD6 105 aa1.18□□□□□ -2.22
SNRNP40-207ENST00000491106 KRTAP5-2Q701N4 177 aa1.18□□□□□ -2.22
SNRNP40-207ENST00000491106 KTN1-AS1Q86SY8 53 aa1.18□□□□□ -2.22
SNRNP40-207ENST00000491106 SPTSSBQ8NFR3 76 aa1.18□□□□□ -2.22
SNRNP40-207ENST00000491106 VWFP04275 2813 aa1.18□□□□□ -2.22
SNRNP40-207ENST00000491106 NBPF19A0A087WUL8 3843 aa1.17□□□□□ -2.22
SNRNP40-207ENST00000491106 A6NN06 94 aa1.17□□□□□ -2.22
SNRNP40-207ENST00000491106 IGLV7-43P04211 117 aa1.17□□□□□ -2.22
SNRNP40-207ENST00000491106 Q5W150 140 aa1.17□□□□□ -2.22
SNRNP40-207ENST00000491106 Q6ZRN7 208 aaPredicted RBP1.17□□□□□ -2.22
SNRNP40-207ENST00000491106 SPACA4Q8TDM5 124 aa1.17□□□□□ -2.22
SNRNP40-207ENST00000491106 DMAC1Q96GE9 116 aa1.17□□□□□ -2.22
SNRNP40-207ENST00000491106 PSORS1C2Q9UIG4 136 aa1.17□□□□□ -2.22
SNRNP40-207ENST00000491106 ZNF469Q96JG9 3925 aaPredicted RBP1.17□□□□□ -2.22
SNRNP40-207ENST00000491106 CCDC168Q8NDH2 2452 aa1.16□□□□□ -2.22
SNRNP40-207ENST00000491106 A0A1B0GU69 56 aa1.16□□□□□ -2.22
SNRNP40-207ENST00000491106 UQCR11O14957 56 aa1.16□□□□□ -2.22
SNRNP40-207ENST00000491106 C1orf134Q5TEV5 83 aa1.16□□□□□ -2.22
SNRNP40-207ENST00000491106 CIRBP-AS1Q8TBR5 109 aa1.16□□□□□ -2.22
SNRNP40-207ENST00000491106 RBM12B-AS1Q9P1G2 102 aa1.16□□□□□ -2.22
SNRNP40-207ENST00000491106 FBN1P35555 2871 aaKnown RBP1.16□□□□□ -2.22
SNRNP40-207ENST00000491106 F8P00451 2351 aa1.15□□□□□ -2.22
SNRNP40-207ENST00000491106 AKAP9Q99996 3911 aa1.15□□□□□ -2.22
SNRNP40-207ENST00000491106 ATRQ13535 2644 aa1.15□□□□□ -2.23
SNRNP40-207ENST00000491106 HELZ2Q9BYK8 2649 aaKnown RBP1.15□□□□□ -2.23
SNRNP40-207ENST00000491106 USP24Q9UPU5 2620 aa1.15□□□□□ -2.23
SNRNP40-207ENST00000491106 HIVEP1P15822 2718 aa1.15□□□□□ -2.23
SNRNP40-207ENST00000491106 OTOGQ6ZRI0 2925 aa1.15□□□□□ -2.23
SNRNP40-207ENST00000491106 CUBNO60494 3623 aa1.15□□□□□ -2.23
SNRNP40-207ENST00000491106 PANO1I0J062 215 aa1.15□□□□□ -2.23
SNRNP40-207ENST00000491106 SPINK1P00995 79 aa1.15□□□□□ -2.23
SNRNP40-207ENST00000491106 SPINK7P58062 85 aa1.15□□□□□ -2.23
SNRNP40-207ENST00000491106 SPINK6Q6UWN8 80 aa1.15□□□□□ -2.23
SNRNP40-207ENST00000491106 C7orf65Q6ZTY9 151 aa1.15□□□□□ -2.23
SNRNP40-207ENST00000491106 RETNLBQ9BQ08 111 aa1.15□□□□□ -2.23
SNRNP40-207ENST00000491106 TENM4Q6N022 2769 aa1.15□□□□□ -2.23
SNRNP40-207ENST00000491106 UNC79Q9P2D8 2635 aa1.15□□□□□ -2.23
SNRNP40-207ENST00000491106 MTORP42345 2549 aa1.15□□□□□ -2.23
SNRNP40-207ENST00000491106 ALMS1Q8TCU4 4167 aa1.14□□□□□ -2.23
SNRNP40-207ENST00000491106 TENM1Q9UKZ4 2725 aa1.14□□□□□ -2.23
SNRNP40-207ENST00000491106 MIR22HGQ0VDD5 57 aa1.14□□□□□ -2.23
SNRNP40-207ENST00000491106 FLNBO75369 2602 aaKnown RBP1.14□□□□□ -2.23
SNRNP40-207ENST00000491106 SRRM2Q9UQ35 2752 aaKnown RBP1.13□□□□□ -2.23
SNRNP40-207ENST00000491106 RPS29P62273 56 aaKnown RBP1.13□□□□□ -2.23
SNRNP40-207ENST00000491106 NSD1Q96L73 2696 aaPredicted RBP1.12□□□□□ -2.23
SNRNP40-207ENST00000491106 LCE1CQ5T751 118 aa1.12□□□□□ -2.23
SNRNP40-207ENST00000491106 LCE1BQ5T7P3 118 aa1.12□□□□□ -2.23
SNRNP40-207ENST00000491106 MAST4O15021 2626 aa1.11□□□□□ -2.23
SNRNP40-207ENST00000491106 FASNP49327 2511 aaKnown RBP1.11□□□□□ -2.23
SNRNP40-207ENST00000491106 LY6G6CO95867 125 aa1.11□□□□□ -2.23
SNRNP40-207ENST00000491106 KRTAP13-2Q52LG2 175 aa1.11□□□□□ -2.23
SNRNP40-207ENST00000491106 LINC01554Q52M75 96 aa1.11□□□□□ -2.23
SNRNP40-207ENST00000491106 Q6ZSA8 131 aa1.11□□□□□ -2.23
SNRNP40-207ENST00000491106 KRTAP5-5Q701N2 237 aaPredicted RBP1.11□□□□□ -2.23
SNRNP40-207ENST00000491106 HECTD1Q9ULT8 2610 aa1.11□□□□□ -2.23
SNRNP40-207ENST00000491106 TENM3Q9P273 2699 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms