RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 UBE2V1Q13404 147 aa11.24□□□□□ -0.61
HOXA9-205ENST00000489695 MT1FP04733 61 aa11.23□□□□□ -0.61
HOXA9-205ENST00000489695 TRACP01848 142 aa11.22□□□□□ -0.61
HOXA9-205ENST00000489695 DSCR10P59022 87 aa11.22□□□□□ -0.61
HOXA9-205ENST00000489695 KRTAP9-3Q9BYQ3 159 aa11.22□□□□□ -0.61
HOXA9-205ENST00000489695 SPCS1Q9Y6A9 102 aa11.22□□□□□ -0.61
HOXA9-205ENST00000489695 ATXN8Q156A1 80 aa11.21□□□□□ -0.61
HOXA9-205ENST00000489695 SIGMAR1Q99720 223 aa11.21□□□□□ -0.61
HOXA9-205ENST00000489695 A0A1B0GV72 72 aa11.19□□□□□ -0.62
HOXA9-205ENST00000489695 IGKV4-1P06312 121 aa11.19□□□□□ -0.62
HOXA9-205ENST00000489695 LINC00472Q9H8W2 130 aa11.19□□□□□ -0.62
HOXA9-205ENST00000489695 CCKP06307 115 aa11.18□□□□□ -0.62
HOXA9-205ENST00000489695 LINC00313P59037 77 aa11.18□□□□□ -0.62
HOXA9-205ENST00000489695 A0A1B0GV90 55 aa11.16□□□□□ -0.62
HOXA9-205ENST00000489695 KRTAP16-1A8MUX0 517 aa11.16□□□□□ -0.62
HOXA9-205ENST00000489695 K7EP34 96 aa11.16□□□□□ -0.62
HOXA9-205ENST00000489695 KRTAP10-10P60014 251 aa11.13□□□□□ -0.63
HOXA9-205ENST00000489695 GTF2H5Q6ZYL4 71 aa11.13□□□□□ -0.63
HOXA9-205ENST00000489695 RBM3P98179 157 aaKnown RBP11.11□□□□□ -0.63
HOXA9-205ENST00000489695 NOTCH2NLQ7Z3S9 236 aa11.11□□□□□ -0.63
HOXA9-205ENST00000489695 C9JAW5 83 aa11.1□□□□□ -0.63
HOXA9-205ENST00000489695 DEFB116Q30KQ4 102 aa11.1□□□□□ -0.63
HOXA9-205ENST00000489695 DSCR8Q96T75 97 aa11.08□□□□□ -0.64
HOXA9-205ENST00000489695 MTURNQ8N3F0 131 aa11.07□□□□□ -0.64
HOXA9-205ENST00000489695 FAM236DA0A1B0GTK5 79 aa11.06□□□□□ -0.64
HOXA9-205ENST00000489695 BAALC-AS2P0C853 105 aa11.06□□□□□ -0.64
HOXA9-205ENST00000489695 FAM236CP0DP71 79 aa11.06□□□□□ -0.64
HOXA9-205ENST00000489695 MPLKIPQ8TAP9 179 aa11.05□□□□□ -0.64
HOXA9-205ENST00000489695 IGHV6-1A0A0B4J1U7 121 aa11.04□□□□□ -0.64
HOXA9-205ENST00000489695 VPS25Q9BRG1 176 aa11.04□□□□□ -0.64
HOXA9-205ENST00000489695 C21orf62-AS1Q17RA5 79 aa11.03□□□□□ -0.64
HOXA9-205ENST00000489695 C8orf87E5RJ46 101 aa11.01□□□□□ -0.65
HOXA9-205ENST00000489695 KRTAP19-6Q3LI70 58 aa11.01□□□□□ -0.65
HOXA9-205ENST00000489695 LINC00846Q9NV44 126 aa11.01□□□□□ -0.65
HOXA9-205ENST00000489695 A0A1B0GVX0 72 aa11□□□□□ -0.65
HOXA9-205ENST00000489695 PRO0461Q9UI25 63 aa11□□□□□ -0.65
HOXA9-205ENST00000489695 H3BT86 120 aa10.99□□□□□ -0.65
HOXA9-205ENST00000489695 RBM12B-AS1Q9P1G2 102 aa10.99□□□□□ -0.65
HOXA9-205ENST00000489695 HRES1P13985 223 aa10.98□□□□□ -0.65
HOXA9-205ENST00000489695 SMCPP49901 116 aaPredicted RBP10.98□□□□□ -0.65
HOXA9-205ENST00000489695 Q6ZQT0 140 aa10.98□□□□□ -0.65
HOXA9-205ENST00000489695 J3KT08 172 aa10.97□□□□□ -0.65
HOXA9-205ENST00000489695 F8W1H4 67 aa10.95□□□□□ -0.66
HOXA9-205ENST00000489695 A0A1B0GW54 56 aa10.93□□□□□ -0.66
HOXA9-205ENST00000489695 JMJD7-PLA2G4BH0Y9G9 81 aa10.93□□□□□ -0.66
HOXA9-205ENST00000489695 LOC110117498A0A087WWA1 95 aa10.91□□□□□ -0.66
HOXA9-205ENST00000489695 PDE6GP18545 87 aa10.88□□□□□ -0.67
HOXA9-205ENST00000489695 NDUFB1O75438 58 aa10.86□□□□□ -0.67
HOXA9-205ENST00000489695 KRTAP6-3Q3LI67 103 aa10.86□□□□□ -0.67
HOXA9-205ENST00000489695 ZCCHC13Q8WW36 166 aaKnown RBP10.85□□□□□ -0.67
HOXA9-205ENST00000489695 ETDBQ3ZM63 59 aa10.84□□□□□ -0.67
HOXA9-205ENST00000489695 Q8N9P0 234 aaPredicted RBP10.84□□□□□ -0.67
HOXA9-205ENST00000489695 A8MWP4 228 aa10.81□□□□□ -0.68
HOXA9-205ENST00000489695 C14orf132Q9NPU4 83 aa10.81□□□□□ -0.68
HOXA9-205ENST00000489695 C8orf17Q9NRJ1 99 aa10.79□□□□□ -0.68
HOXA9-205ENST00000489695 IGKV3D-7A0A0C4DH55 119 aa10.77□□□□□ -0.69
HOXA9-205ENST00000489695 SPINK7P58062 85 aa10.76□□□□□ -0.69
HOXA9-205ENST00000489695 PRR15Q8IV56 129 aa10.72□□□□□ -0.69
HOXA9-205ENST00000489695 NREPQ16612 68 aa10.71□□□□□ -0.69
HOXA9-205ENST00000489695 Q6ZVQ6 151 aa10.7□□□□□ -0.7
HOXA9-205ENST00000489695 MMP24-AS1A0A0U1RRL7 71 aa10.63□□□□□ -0.71
HOXA9-205ENST00000489695 NEBP20929 6669 aa10.62□□□□□ -0.71
HOXA9-205ENST00000489695 TMEM254Q8TBM7 123 aa10.62□□□□□ -0.71
HOXA9-205ENST00000489695 MRPL34Q9BQ48 92 aaKnown RBP10.61□□□□□ -0.71
HOXA9-205ENST00000489695 WFDC13Q8IUB5 93 aa10.58□□□□□ -0.72
HOXA9-205ENST00000489695 K7EQZ3 153 aa10.56□□□□□ -0.72
HOXA9-205ENST00000489695 hDV103S1A0JD37 113 aa10.55□□□□□ -0.72
HOXA9-205ENST00000489695 J3QR89 54 aa10.55□□□□□ -0.72
HOXA9-205ENST00000489695 FAM240AA0A1B0GVK7 77 aa10.5□□□□□ -0.73
HOXA9-205ENST00000489695 BPY2O14599 106 aa10.5□□□□□ -0.73
HOXA9-205ENST00000489695 ACYP1P07311 99 aa10.5□□□□□ -0.73
HOXA9-205ENST00000489695 K7ERU9 68 aa10.47□□□□□ -0.73
HOXA9-205ENST00000489695 NDUFS5O43920 106 aa10.46□□□□□ -0.73
HOXA9-205ENST00000489695 UBL5Q9BZL1 73 aa10.46□□□□□ -0.73
HOXA9-205ENST00000489695 MUC12Q9UKN1 5478 aa10.45□□□□□ -0.74
HOXA9-205ENST00000489695 Q5W150 140 aa10.41□□□□□ -0.74
HOXA9-205ENST00000489695 H1FX-AS1Q4G0G2 97 aa10.4□□□□□ -0.74
HOXA9-205ENST00000489695 Q8N9L7 120 aa10.38□□□□□ -0.75
HOXA9-205ENST00000489695 CASC2Q6XLA1 102 aa10.36□□□□□ -0.75
HOXA9-205ENST00000489695 C7orf65Q6ZTY9 151 aa10.35□□□□□ -0.75
HOXA9-205ENST00000489695 IGKV2D-30A0A075B6S6 120 aa10.34□□□□□ -0.75
HOXA9-205ENST00000489695 IGKV2-30P06310 120 aa10.34□□□□□ -0.75
HOXA9-205ENST00000489695 HCG22E2RYF7 251 aa10.32□□□□□ -0.76
HOXA9-205ENST00000489695 KRTAP20-1Q3LI63 56 aa10.32□□□□□ -0.76
HOXA9-205ENST00000489695 LINC00643Q86TS7 51 aa10.31□□□□□ -0.76
HOXA9-205ENST00000489695 CXCL6P80162 114 aa10.29□□□□□ -0.76
HOXA9-205ENST00000489695 ATP5EP2Q5VTU8 51 aa10.26□□□□□ -0.77
HOXA9-205ENST00000489695 A6NN06 94 aa10.24□□□□□ -0.77
HOXA9-205ENST00000489695 C4orf26Q17RF5 130 aa10.19□□□□□ -0.78
HOXA9-205ENST00000489695 MT-ATP8P03928 68 aa10.16□□□□□ -0.78
HOXA9-205ENST00000489695 MT1BP07438 61 aa10.15□□□□□ -0.78
HOXA9-205ENST00000489695 HIST1H4AP62805 103 aaKnown RBP10.15□□□□□ -0.78
HOXA9-205ENST00000489695 KRTAP5-9P26371 169 aa10.13□□□□□ -0.79
HOXA9-205ENST00000489695 MDN1Q9NU22 5596 aa10.12□□□□□ -0.79
HOXA9-205ENST00000489695 KRTAP3-1Q9BYR8 98 aa10.1□□□□□ -0.79
HOXA9-205ENST00000489695 KMT2DO14686 5537 aa10.1□□□□□ -0.79
HOXA9-205ENST00000489695 TP53AIP1Q9HCN2 124 aa10.08□□□□□ -0.8
HOXA9-205ENST00000489695 A0A087WVE0 104 aa10.07□□□□□ -0.8
HOXA9-205ENST00000489695 Q5VV11 94 aa10.06□□□□□ -0.8
HOXA9-205ENST00000489695 IMUPQ9GZP8 106 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms