RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 IGHV3OR16-9A0A0B4J2B5 98 aa3.65□□□□□ -1.83
CNOT9-207ENST00000489687 CNBPP62633 177 aaKnown RBP3.65□□□□□ -1.83
CNOT9-207ENST00000489687 RNASE13Q5GAN3 156 aaKnown RBP3.65□□□□□ -1.83
CNOT9-207ENST00000489687 LCE3BQ5TA77 95 aa3.65□□□□□ -1.83
CNOT9-207ENST00000489687 SPACA4Q8TDM5 124 aa3.65□□□□□ -1.83
CNOT9-207ENST00000489687 CHCHD10Q8WYQ3 142 aaPredicted RBP3.65□□□□□ -1.83
CNOT9-207ENST00000489687 KCNQ1DNQ9H478 68 aa3.65□□□□□ -1.83
CNOT9-207ENST00000489687 PLAC8Q9NZF1 115 aa3.65□□□□□ -1.83
CNOT9-207ENST00000489687 A0A1B0GUV1 79 aa3.64□□□□□ -1.83
CNOT9-207ENST00000489687 ETDCA0A1B0GVM5 59 aa3.64□□□□□ -1.83
CNOT9-207ENST00000489687 HCG22E2RYF7 251 aa3.64□□□□□ -1.83
CNOT9-207ENST00000489687 MT1HL1P0DM35 61 aa3.64□□□□□ -1.83
CNOT9-207ENST00000489687 LINC00158P58513 81 aa3.64□□□□□ -1.83
CNOT9-207ENST00000489687 Q8IZM0 81 aa3.64□□□□□ -1.83
CNOT9-207ENST00000489687 A0A096LNI7 61 aa3.63□□□□□ -1.83
CNOT9-207ENST00000489687 HIGD2AQ9BW72 106 aa3.63□□□□□ -1.83
CNOT9-207ENST00000489687 GVQW2A0A096LPI5 108 aaPredicted RBP3.62□□□□□ -1.83
CNOT9-207ENST00000489687 PSPHP1O15172 72 aa3.62□□□□□ -1.83
CNOT9-207ENST00000489687 IGLV6-57P01721 117 aa3.62□□□□□ -1.83
CNOT9-207ENST00000489687 C9orf116Q5BN46 136 aaPredicted RBP3.62□□□□□ -1.83
CNOT9-207ENST00000489687 KRTAP9-2Q9BYQ4 174 aa3.62□□□□□ -1.83
CNOT9-207ENST00000489687 LINC01558Q9Y6Z2 57 aa3.62□□□□□ -1.83
CNOT9-207ENST00000489687 LINC00959A0A1B0GUT2 108 aa3.61□□□□□ -1.83
CNOT9-207ENST00000489687 CHKB-CPT1BH3BT56 60 aa3.61□□□□□ -1.83
CNOT9-207ENST00000489687 PRR3P79522 188 aaKnown RBP3.61□□□□□ -1.83
CNOT9-207ENST00000489687 PRR26Q8N8Z3 221 aa3.61□□□□□ -1.83
CNOT9-207ENST00000489687 LINC01554Q52M75 96 aa3.6□□□□□ -1.83
CNOT9-207ENST00000489687 C10orf25Q5T742 122 aa3.6□□□□□ -1.83
CNOT9-207ENST00000489687 C7orf33Q8WU49 177 aa3.6□□□□□ -1.83
CNOT9-207ENST00000489687 IGLV5-48A0A075B6I7 105 aa3.59□□□□□ -1.83
CNOT9-207ENST00000489687 NOTCH2NLQ7Z3S9 236 aa3.59□□□□□ -1.83
CNOT9-207ENST00000489687 LINC00208Q96KT6 92 aa3.59□□□□□ -1.83
CNOT9-207ENST00000489687 LPAP08519 4548 aa3.59□□□□□ -1.84
CNOT9-207ENST00000489687 C6orf99Q4VX62 202 aa3.58□□□□□ -1.84
CNOT9-207ENST00000489687 SPAG11BQ08648 103 aa3.57□□□□□ -1.84
CNOT9-207ENST00000489687 MOBPQ13875 183 aa3.57□□□□□ -1.84
CNOT9-207ENST00000489687 KRTAP9-6A0A140TA67 174 aa3.56□□□□□ -1.84
CNOT9-207ENST00000489687 A0A1W2PNN7 141 aa3.56□□□□□ -1.84
CNOT9-207ENST00000489687 FAM168BA1KXE4 195 aa3.56□□□□□ -1.84
CNOT9-207ENST00000489687 MP68P56378 58 aa3.56□□□□□ -1.84
CNOT9-207ENST00000489687 CASC2Q6XLA1 102 aa3.56□□□□□ -1.84
CNOT9-207ENST00000489687 Q6ZQY7 126 aa3.56□□□□□ -1.84
CNOT9-207ENST00000489687 SPRR4Q96PI1 79 aa3.56□□□□□ -1.84
CNOT9-207ENST00000489687 CAMK2N2Q96S95 79 aa3.56□□□□□ -1.84
CNOT9-207ENST00000489687 IGLV7-46A0A075B6I9 117 aa3.55□□□□□ -1.84
CNOT9-207ENST00000489687 A6NED7 52 aa3.55□□□□□ -1.84
CNOT9-207ENST00000489687 LINC00313P59037 77 aa3.55□□□□□ -1.84
CNOT9-207ENST00000489687 KRTAP11-1Q8IUC1 163 aa3.55□□□□□ -1.84
CNOT9-207ENST00000489687 PRR15LQ9BU68 103 aa3.55□□□□□ -1.84
CNOT9-207ENST00000489687 A8MU10 97 aa3.54□□□□□ -1.84
CNOT9-207ENST00000489687 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.54□□□□□ -1.84
CNOT9-207ENST00000489687 H0Y9J4 135 aa3.54□□□□□ -1.84
CNOT9-207ENST00000489687 SMIM29Q86T20 159 aa3.54□□□□□ -1.84
CNOT9-207ENST00000489687 SPTSSBQ8NFR3 76 aa3.54□□□□□ -1.84
CNOT9-207ENST00000489687 PSORS1C2Q9UIG4 136 aa3.54□□□□□ -1.84
CNOT9-207ENST00000489687 UNQ6190/PRO20217Q6UXQ8 127 aa3.53□□□□□ -1.84
CNOT9-207ENST00000489687 C6orf48Q9UBA6 75 aa3.53□□□□□ -1.84
CNOT9-207ENST00000489687 MUC2Q02817 5179 aa3.52□□□□□ -1.85
CNOT9-207ENST00000489687 C1orf137Q5JT78 98 aa3.52□□□□□ -1.85
CNOT9-207ENST00000489687 REG3GQ6UW15 175 aa3.52□□□□□ -1.85
CNOT9-207ENST00000489687 KRTAP7-1Q8IUC3 87 aa3.52□□□□□ -1.85
CNOT9-207ENST00000489687 TOMM7Q9P0U1 55 aa3.52□□□□□ -1.85
CNOT9-207ENST00000489687 DSCR10P59022 87 aa3.51□□□□□ -1.85
CNOT9-207ENST00000489687 KRTAP15-1Q3LI76 137 aa3.51□□□□□ -1.85
CNOT9-207ENST00000489687 SPINK6Q6UWN8 80 aa3.51□□□□□ -1.85
CNOT9-207ENST00000489687 FAT4Q6V0I7 4981 aa3.51□□□□□ -1.85
CNOT9-207ENST00000489687 KRTAP9-7A8MTY7 169 aa3.5□□□□□ -1.85
CNOT9-207ENST00000489687 KRTAP10-8P60410 259 aa3.5□□□□□ -1.85
CNOT9-207ENST00000489687 SEC61BP60468 96 aaKnown RBP3.5□□□□□ -1.85
CNOT9-207ENST00000489687 Q8NBF4 154 aa3.5□□□□□ -1.85
CNOT9-207ENST00000489687 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
CNOT9-207ENST00000489687 IGLV7-43P04211 117 aa3.49□□□□□ -1.85
CNOT9-207ENST00000489687 COA5Q86WW8 74 aa3.49□□□□□ -1.85
CNOT9-207ENST00000489687 Q8N9L7 120 aa3.48□□□□□ -1.85
CNOT9-207ENST00000489687 ST20-AS1Q8NBB2 130 aa3.48□□□□□ -1.85
CNOT9-207ENST00000489687 XAGE1AQ9HD64 81 aa3.48□□□□□ -1.85
CNOT9-207ENST00000489687 KRTAP1-4P0C5Y4 121 aa3.47□□□□□ -1.85
CNOT9-207ENST00000489687 SPATA8Q6RVD6 105 aa3.47□□□□□ -1.85
CNOT9-207ENST00000489687 Q8NDZ9 215 aa3.47□□□□□ -1.85
CNOT9-207ENST00000489687 RETNLBQ9BQ08 111 aa3.47□□□□□ -1.85
CNOT9-207ENST00000489687 IGLV8-61A0A075B6I0 122 aa3.46□□□□□ -1.86
CNOT9-207ENST00000489687 A0A1W2PNM2 257 aa3.46□□□□□ -1.86
CNOT9-207ENST00000489687 TLX1NBP0CAT3 122 aa3.46□□□□□ -1.86
CNOT9-207ENST00000489687 LCE4AQ5TA78 99 aa3.46□□□□□ -1.86
CNOT9-207ENST00000489687 DHRS4-AS1Q9P1J3 65 aa3.46□□□□□ -1.86
CNOT9-207ENST00000489687 RPL37AP8A6NKH3 93 aa3.45□□□□□ -1.86
CNOT9-207ENST00000489687 TP53AIP1Q9HCN2 124 aa3.45□□□□□ -1.86
CNOT9-207ENST00000489687 MUC17Q685J3 4493 aa3.44□□□□□ -1.86
CNOT9-207ENST00000489687 IGLV5-37A0A075B6J1 123 aa3.44□□□□□ -1.86
CNOT9-207ENST00000489687 IGHV6-1A0A0B4J1U7 121 aa3.44□□□□□ -1.86
CNOT9-207ENST00000489687 H0Y9P7 68 aa3.44□□□□□ -1.86
CNOT9-207ENST00000489687 LCE1DQ5T752 114 aa3.44□□□□□ -1.86
CNOT9-207ENST00000489687 Q8N377 158 aa3.44□□□□□ -1.86
CNOT9-207ENST00000489687 KRTAP9-3Q9BYQ3 159 aa3.44□□□□□ -1.86
CNOT9-207ENST00000489687 K7EQZ3 153 aa3.43□□□□□ -1.86
CNOT9-207ENST00000489687 ANAPC11Q9NYG5 84 aa3.43□□□□□ -1.86
CNOT9-207ENST00000489687 SPINK7P58062 85 aa3.42□□□□□ -1.86
CNOT9-207ENST00000489687 PRR4Q16378 134 aa3.42□□□□□ -1.86
CNOT9-207ENST00000489687 IGLV1-50A0A075B6I6 118 aa3.41□□□□□ -1.86
CNOT9-207ENST00000489687 SPRR1AP35321 89 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms