RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 DEFB116Q30KQ4 102 aa6.02□□□□□ -1.45
TFF3-203ENST00000489676 Q6ZVQ6 151 aa6.02□□□□□ -1.45
TFF3-203ENST00000489676 IGKV4-1P06312 121 aa6.01□□□□□ -1.45
TFF3-203ENST00000489676 NREPQ16612 68 aa6.01□□□□□ -1.45
TFF3-203ENST00000489676 PCP4P48539 62 aa6□□□□□ -1.45
TFF3-203ENST00000489676 J3KT08 172 aa5.99□□□□□ -1.45
TFF3-203ENST00000489676 MT-ATP8P03928 68 aa5.99□□□□□ -1.45
TFF3-203ENST00000489676 DSCR10P59022 87 aa5.97□□□□□ -1.45
TFF3-203ENST00000489676 C9orf92A6NGG3 77 aa5.96□□□□□ -1.46
TFF3-203ENST00000489676 A8MWP4 228 aa5.96□□□□□ -1.46
TFF3-203ENST00000489676 IGKV3D-7A0A0C4DH55 119 aa5.95□□□□□ -1.46
TFF3-203ENST00000489676 A0A1B0GVX0 72 aa5.95□□□□□ -1.46
TFF3-203ENST00000489676 XP32Q5T750 250 aa5.95□□□□□ -1.46
TFF3-203ENST00000489676 BPY2O14599 106 aa5.94□□□□□ -1.46
TFF3-203ENST00000489676 CXCL6P80162 114 aa5.94□□□□□ -1.46
TFF3-203ENST00000489676 NOTCH2NLQ7Z3S9 236 aa5.94□□□□□ -1.46
TFF3-203ENST00000489676 K7EQZ3 153 aa5.93□□□□□ -1.46
TFF3-203ENST00000489676 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
TFF3-203ENST00000489676 IGHV6-1A0A0B4J1U7 121 aa5.92□□□□□ -1.46
TFF3-203ENST00000489676 KRTAP16-1A8MUX0 517 aa5.92□□□□□ -1.46
TFF3-203ENST00000489676 PRR15Q8IV56 129 aa5.92□□□□□ -1.46
TFF3-203ENST00000489676 C8orf87E5RJ46 101 aa5.91□□□□□ -1.46
TFF3-203ENST00000489676 NDUFB1O75438 58 aa5.9□□□□□ -1.46
TFF3-203ENST00000489676 Q8N9L7 120 aa5.9□□□□□ -1.46
TFF3-203ENST00000489676 LINC00313P59037 77 aa5.89□□□□□ -1.47
TFF3-203ENST00000489676 ANAPC13Q9BS18 74 aa5.89□□□□□ -1.47
TFF3-203ENST00000489676 C8orf17Q9NRJ1 99 aa5.89□□□□□ -1.47
TFF3-203ENST00000489676 MMP24-AS1A0A0U1RRL7 71 aa5.88□□□□□ -1.47
TFF3-203ENST00000489676 ATOX1O00244 68 aa5.88□□□□□ -1.47
TFF3-203ENST00000489676 SMIM20Q8N5G0 67 aa5.88□□□□□ -1.47
TFF3-203ENST00000489676 C20orf166-AS1Q96NR2 134 aa5.88□□□□□ -1.47
TFF3-203ENST00000489676 KRTAP9-6A0A140TA67 174 aa5.87□□□□□ -1.47
TFF3-203ENST00000489676 A8MUU9 505 aa5.86□□□□□ -1.47
TFF3-203ENST00000489676 RPL37P61927 97 aaKnown RBP5.86□□□□□ -1.47
TFF3-203ENST00000489676 HIST1H4AP62805 103 aaKnown RBP5.86□□□□□ -1.47
TFF3-203ENST00000489676 Q75L30 129 aa5.86□□□□□ -1.47
TFF3-203ENST00000489676 MUC17Q685J3 4493 aa5.86□□□□□ -1.47
TFF3-203ENST00000489676 FAM236AA0A1B0GUQ0 79 aa5.84□□□□□ -1.47
TFF3-203ENST00000489676 FAM236BA0A1B0GV22 79 aa5.84□□□□□ -1.47
TFF3-203ENST00000489676 Q8N9P0 234 aaPredicted RBP5.83□□□□□ -1.48
TFF3-203ENST00000489676 TMEM254Q8TBM7 123 aa5.82□□□□□ -1.48
TFF3-203ENST00000489676 hDV103S1A0JD37 113 aa5.81□□□□□ -1.48
TFF3-203ENST00000489676 HCG22E2RYF7 251 aa5.8□□□□□ -1.48
TFF3-203ENST00000489676 SEC61BP60468 96 aaKnown RBP5.8□□□□□ -1.48
TFF3-203ENST00000489676 MRPL34Q9BQ48 92 aaKnown RBP5.8□□□□□ -1.48
TFF3-203ENST00000489676 UQCRQO14949 82 aa5.79□□□□□ -1.48
TFF3-203ENST00000489676 PCOTHQ58A44 107 aa5.79□□□□□ -1.48
TFF3-203ENST00000489676 CASC2Q6XLA1 102 aa5.79□□□□□ -1.48
TFF3-203ENST00000489676 WFDC13Q8IUB5 93 aa5.79□□□□□ -1.48
TFF3-203ENST00000489676 SERP2Q8N6R1 65 aa5.77□□□□□ -1.49
TFF3-203ENST00000489676 A0A087WVE0 104 aa5.76□□□□□ -1.49
TFF3-203ENST00000489676 COX7CP15954 63 aa5.76□□□□□ -1.49
TFF3-203ENST00000489676 KRTAP4-1Q9BYQ7 146 aa5.76□□□□□ -1.49
TFF3-203ENST00000489676 A0A0U1RQV1 116 aa5.75□□□□□ -1.49
TFF3-203ENST00000489676 MUC2Q02817 5179 aa5.74□□□□□ -1.49
TFF3-203ENST00000489676 ATP11AUNQ6ZP68 121 aa5.74□□□□□ -1.49
TFF3-203ENST00000489676 TRAV7A0A075B6U4 112 aa5.73□□□□□ -1.49
TFF3-203ENST00000489676 ZCCHC13Q8WW36 166 aaKnown RBP5.73□□□□□ -1.49
TFF3-203ENST00000489676 FAT4Q6V0I7 4981 aa5.7□□□□□ -1.5
TFF3-203ENST00000489676 NDUFS5O43920 106 aa5.69□□□□□ -1.5
TFF3-203ENST00000489676 Q5W150 140 aa5.68□□□□□ -1.5
TFF3-203ENST00000489676 NDUFC1O43677 76 aa5.67□□□□□ -1.5
TFF3-203ENST00000489676 TP53AIP1Q9HCN2 124 aa5.66□□□□□ -1.5
TFF3-203ENST00000489676 CCDC179H3BU77 68 aa5.64□□□□□ -1.51
TFF3-203ENST00000489676 LCE2AQ5TA79 106 aaPredicted RBP5.64□□□□□ -1.51
TFF3-203ENST00000489676 C5orf47Q569G3 176 aa5.63□□□□□ -1.51
TFF3-203ENST00000489676 OCR1Q9BZK8 76 aa5.63□□□□□ -1.51
TFF3-203ENST00000489676 H3BPC8 53 aa5.61□□□□□ -1.51
TFF3-203ENST00000489676 KLKP1Q107X0 134 aa5.61□□□□□ -1.51
TFF3-203ENST00000489676 KRTAP19-2Q3LHN2 52 aa5.61□□□□□ -1.51
TFF3-203ENST00000489676 HRES1P13985 223 aa5.6□□□□□ -1.51
TFF3-203ENST00000489676 SPINK7P58062 85 aa5.6□□□□□ -1.51
TFF3-203ENST00000489676 TMEM258P61165 79 aa5.6□□□□□ -1.51
TFF3-203ENST00000489676 TRAV22A0A0B4J277 110 aa5.59□□□□□ -1.51
TFF3-203ENST00000489676 MP68P56378 58 aa5.59□□□□□ -1.51
TFF3-203ENST00000489676 MPLKIPQ8TAP9 179 aa5.59□□□□□ -1.51
TFF3-203ENST00000489676 C20orf197Q8N268 126 aa5.58□□□□□ -1.52
TFF3-203ENST00000489676 IGKV2-30P06310 120 aa5.57□□□□□ -1.52
TFF3-203ENST00000489676 ATP5EP56381 51 aaPredicted RBP5.57□□□□□ -1.52
TFF3-203ENST00000489676 C7orf65Q6ZTY9 151 aa5.57□□□□□ -1.52
TFF3-203ENST00000489676 LCE2CQ5TA81 110 aa5.56□□□□□ -1.52
TFF3-203ENST00000489676 IGKV2D-30A0A075B6S6 120 aa5.55□□□□□ -1.52
TFF3-203ENST00000489676 H0Y9P7 68 aa5.54□□□□□ -1.52
TFF3-203ENST00000489676 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
TFF3-203ENST00000489676 LOC101927531A0A1B0GV80 90 aa5.51□□□□□ -1.53
TFF3-203ENST00000489676 RPS28P62857 69 aaKnown RBP5.51□□□□□ -1.53
TFF3-203ENST00000489676 CYP4F30PQ9H0H9 118 aa5.5□□□□□ -1.53
TFF3-203ENST00000489676 H7BZZ5 65 aa5.48□□□□□ -1.53
TFF3-203ENST00000489676 LCE2DQ5TA82 110 aaPredicted RBP5.48□□□□□ -1.53
TFF3-203ENST00000489676 FSIP2Q5CZC0 6907 aa5.48□□□□□ -1.53
TFF3-203ENST00000489676 FAM236DA0A1B0GTK5 79 aa5.47□□□□□ -1.53
TFF3-203ENST00000489676 FAM236CP0DP71 79 aa5.47□□□□□ -1.53
TFF3-203ENST00000489676 C1orf64Q8NEQ6 169 aa5.47□□□□□ -1.53
TFF3-203ENST00000489676 LINC00208Q96KT6 92 aa5.47□□□□□ -1.53
TFF3-203ENST00000489676 RBM12B-AS1Q9P1G2 102 aa5.47□□□□□ -1.53
TFF3-203ENST00000489676 SNURFQ9Y675 71 aa5.47□□□□□ -1.53
TFF3-203ENST00000489676 FLGP20930 4061 aaPredicted RBP5.46□□□□□ -1.53
TFF3-203ENST00000489676 COX6B2Q6YFQ2 88 aa5.46□□□□□ -1.54
TFF3-203ENST00000489676 MT1HP80294 61 aa5.44□□□□□ -1.54
TFF3-203ENST00000489676 C4orf26Q17RF5 130 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms