RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 LOC110117498A0A087WWA1 95 aa4.56□□□□□ -1.68
SF1-218ENST00000489544 DEFB116Q30KQ4 102 aa4.56□□□□□ -1.68
SF1-218ENST00000489544 SS18L2Q9UHA2 77 aa4.56□□□□□ -1.68
SF1-218ENST00000489544 GTF2H5Q6ZYL4 71 aa4.55□□□□□ -1.68
SF1-218ENST00000489544 KRTAP9-9Q9BYP9 154 aa4.53□□□□□ -1.68
SF1-218ENST00000489544 KRTAP9-4Q9BYQ2 154 aa4.53□□□□□ -1.68
SF1-218ENST00000489544 LINC00472Q9H8W2 130 aa4.53□□□□□ -1.68
SF1-218ENST00000489544 A0A1B0GV90 55 aa4.52□□□□□ -1.69
SF1-218ENST00000489544 PDE6GP18545 87 aa4.52□□□□□ -1.69
SF1-218ENST00000489544 SIGMAR1Q99720 223 aa4.52□□□□□ -1.69
SF1-218ENST00000489544 IGKV4-1P06312 121 aa4.51□□□□□ -1.69
SF1-218ENST00000489544 MUC2Q02817 5179 aa4.51□□□□□ -1.69
SF1-218ENST00000489544 F8W1H4 67 aa4.5□□□□□ -1.69
SF1-218ENST00000489544 ETDBQ3ZM63 59 aa4.5□□□□□ -1.69
SF1-218ENST00000489544 DSCR10P59022 87 aa4.49□□□□□ -1.69
SF1-218ENST00000489544 NOTCH2NLQ7Z3S9 236 aa4.49□□□□□ -1.69
SF1-218ENST00000489544 IGHV6-1A0A0B4J1U7 121 aa4.46□□□□□ -1.7
SF1-218ENST00000489544 KRTAP4-8A0A0G2JLE6 195 aa4.46□□□□□ -1.7
SF1-218ENST00000489544 A0A1B0GW54 56 aa4.46□□□□□ -1.7
SF1-218ENST00000489544 NREPQ16612 68 aa4.46□□□□□ -1.7
SF1-218ENST00000489544 KRTAP4-1Q9BYQ7 146 aa4.46□□□□□ -1.7
SF1-218ENST00000489544 PCOTHQ58A44 107 aa4.45□□□□□ -1.7
SF1-218ENST00000489544 SEC61BP60468 96 aaKnown RBP4.44□□□□□ -1.7
SF1-218ENST00000489544 RPL37P61927 97 aaKnown RBP4.44□□□□□ -1.7
SF1-218ENST00000489544 Q6ZVQ6 151 aa4.44□□□□□ -1.7
SF1-218ENST00000489544 LINC00846Q9NV44 126 aa4.44□□□□□ -1.7
SF1-218ENST00000489544 IGKV3D-7A0A0C4DH55 119 aa4.43□□□□□ -1.7
SF1-218ENST00000489544 A0A1B0GVX0 72 aa4.43□□□□□ -1.7
SF1-218ENST00000489544 KRTAP16-1A8MUX0 517 aa4.43□□□□□ -1.7
SF1-218ENST00000489544 J3KT08 172 aa4.43□□□□□ -1.7
SF1-218ENST00000489544 LINC00313P59037 77 aa4.43□□□□□ -1.7
SF1-218ENST00000489544 A8MWP4 228 aa4.42□□□□□ -1.7
SF1-218ENST00000489544 Q75L30 129 aa4.41□□□□□ -1.7
SF1-218ENST00000489544 A8MUU9 505 aa4.4□□□□□ -1.71
SF1-218ENST00000489544 K7EQZ3 153 aa4.4□□□□□ -1.71
SF1-218ENST00000489544 BPY2O14599 106 aa4.4□□□□□ -1.71
SF1-218ENST00000489544 NDUFB1O75438 58 aa4.4□□□□□ -1.71
SF1-218ENST00000489544 Q8N9L7 120 aa4.4□□□□□ -1.71
SF1-218ENST00000489544 C20orf166-AS1Q96NR2 134 aa4.4□□□□□ -1.71
SF1-218ENST00000489544 C8orf87E5RJ46 101 aa4.39□□□□□ -1.71
SF1-218ENST00000489544 PRR15Q8IV56 129 aa4.39□□□□□ -1.71
SF1-218ENST00000489544 UBL5Q9BZL1 73 aa4.39□□□□□ -1.71
SF1-218ENST00000489544 C8orf17Q9NRJ1 99 aa4.39□□□□□ -1.71
SF1-218ENST00000489544 ATP11AUNQ6ZP68 121 aa4.37□□□□□ -1.71
SF1-218ENST00000489544 MMP24-AS1A0A0U1RRL7 71 aa4.36□□□□□ -1.71
SF1-218ENST00000489544 FAT4Q6V0I7 4981 aa4.36□□□□□ -1.71
SF1-218ENST00000489544 A0A0U1RQV1 116 aa4.35□□□□□ -1.71
SF1-218ENST00000489544 LCE1DQ5T752 114 aa4.33□□□□□ -1.72
SF1-218ENST00000489544 WFDC13Q8IUB5 93 aa4.33□□□□□ -1.72
SF1-218ENST00000489544 FAM240AA0A1B0GVK7 77 aa4.32□□□□□ -1.72
SF1-218ENST00000489544 hDV103S1A0JD37 113 aa4.32□□□□□ -1.72
SF1-218ENST00000489544 ACYP1P07311 99 aa4.32□□□□□ -1.72
SF1-218ENST00000489544 Q8N9P0 234 aaPredicted RBP4.32□□□□□ -1.72
SF1-218ENST00000489544 MRPL34Q9BQ48 92 aaKnown RBP4.32□□□□□ -1.72
SF1-218ENST00000489544 TMEM254Q8TBM7 123 aa4.31□□□□□ -1.72
SF1-218ENST00000489544 KRTAP4-7Q9BYR0 210 aa4.31□□□□□ -1.72
SF1-218ENST00000489544 NDUFS5O43920 106 aa4.3□□□□□ -1.72
SF1-218ENST00000489544 CXCL6P80162 114 aa4.3□□□□□ -1.72
SF1-218ENST00000489544 KRTAP19-2Q3LHN2 52 aa4.3□□□□□ -1.72
SF1-218ENST00000489544 CASC2Q6XLA1 102 aa4.3□□□□□ -1.72
SF1-218ENST00000489544 ZCCHC13Q8WW36 166 aaKnown RBP4.29□□□□□ -1.72
SF1-218ENST00000489544 HCG22E2RYF7 251 aa4.28□□□□□ -1.72
SF1-218ENST00000489544 Q5W150 140 aa4.26□□□□□ -1.73
SF1-218ENST00000489544 J3QR89 54 aa4.25□□□□□ -1.73
SF1-218ENST00000489544 LINC00643Q86TS7 51 aa4.25□□□□□ -1.73
SF1-218ENST00000489544 A0A087WVE0 104 aa4.24□□□□□ -1.73
SF1-218ENST00000489544 SPINK7P58062 85 aa4.24□□□□□ -1.73
SF1-218ENST00000489544 HIST1H4AP62805 103 aaKnown RBP4.24□□□□□ -1.73
SF1-218ENST00000489544 ATP5EP2Q5VTU8 51 aa4.24□□□□□ -1.73
SF1-218ENST00000489544 HRES1P13985 223 aa4.23□□□□□ -1.73
SF1-218ENST00000489544 COX6B2Q6YFQ2 88 aa4.22□□□□□ -1.73
SF1-218ENST00000489544 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.74
SF1-218ENST00000489544 MT1HP80294 61 aa4.2□□□□□ -1.74
SF1-218ENST00000489544 IGKV2D-30A0A075B6S6 120 aa4.19□□□□□ -1.74
SF1-218ENST00000489544 K7ERU9 68 aa4.19□□□□□ -1.74
SF1-218ENST00000489544 IGKV2-30P06310 120 aa4.19□□□□□ -1.74
SF1-218ENST00000489544 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
SF1-218ENST00000489544 MPLKIPQ8TAP9 179 aa4.19□□□□□ -1.74
SF1-218ENST00000489544 FLGP20930 4061 aaPredicted RBP4.16□□□□□ -1.74
SF1-218ENST00000489544 FAM236DA0A1B0GTK5 79 aa4.16□□□□□ -1.74
SF1-218ENST00000489544 MT-ATP8P03928 68 aa4.16□□□□□ -1.74
SF1-218ENST00000489544 FAM236CP0DP71 79 aa4.16□□□□□ -1.74
SF1-218ENST00000489544 PCP4P48539 62 aa4.15□□□□□ -1.75
SF1-218ENST00000489544 C7orf65Q6ZTY9 151 aa4.15□□□□□ -1.75
SF1-218ENST00000489544 TP53AIP1Q9HCN2 124 aa4.15□□□□□ -1.75
SF1-218ENST00000489544 RBM12B-AS1Q9P1G2 102 aa4.15□□□□□ -1.75
SF1-218ENST00000489544 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
SF1-218ENST00000489544 H3BS24 57 aa4.12□□□□□ -1.75
SF1-218ENST00000489544 M0R2T5 61 aa4.12□□□□□ -1.75
SF1-218ENST00000489544 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
SF1-218ENST00000489544 TRAV22A0A0B4J277 110 aa4.11□□□□□ -1.75
SF1-218ENST00000489544 UQCRQO14949 82 aa4.11□□□□□ -1.75
SF1-218ENST00000489544 C4orf26Q17RF5 130 aa4.11□□□□□ -1.75
SF1-218ENST00000489544 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
SF1-218ENST00000489544 H0Y9P7 68 aa4.1□□□□□ -1.75
SF1-218ENST00000489544 OCR1Q9BZK8 76 aa4.1□□□□□ -1.75
SF1-218ENST00000489544 KRTAP9-7A8MTY7 169 aa4.08□□□□□ -1.76
SF1-218ENST00000489544 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
SF1-218ENST00000489544 IMUPQ9GZP8 106 aa4.08□□□□□ -1.76
SF1-218ENST00000489544 CYP4F30PQ9H0H9 118 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 228.4 ms