RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 A0A087WVE0 104 aa3.32□□□□□ -1.88
ATG4A-208ENST00000489247 UQCRQO14949 82 aa3.32□□□□□ -1.88
ATG4A-208ENST00000489247 IGKV4-1P06312 121 aa3.32□□□□□ -1.88
ATG4A-208ENST00000489247 KRTAP10-1P60331 282 aa3.32□□□□□ -1.88
ATG4A-208ENST00000489247 SCXQ7RTU7 201 aa3.32□□□□□ -1.88
ATG4A-208ENST00000489247 NOTCH2NLQ7Z3S9 236 aa3.32□□□□□ -1.88
ATG4A-208ENST00000489247 SMIM20Q8N5G0 67 aa3.32□□□□□ -1.88
ATG4A-208ENST00000489247 VPS13BQ7Z7G8 4022 aa3.32□□□□□ -1.88
ATG4A-208ENST00000489247 PKHD1P08F94 4074 aa3.31□□□□□ -1.88
ATG4A-208ENST00000489247 A0A087X002 238 aa3.31□□□□□ -1.88
ATG4A-208ENST00000489247 BPY2O14599 106 aa3.31□□□□□ -1.88
ATG4A-208ENST00000489247 COX7CP15954 63 aa3.31□□□□□ -1.88
ATG4A-208ENST00000489247 DSCR10P59022 87 aa3.31□□□□□ -1.88
ATG4A-208ENST00000489247 SERP2Q8N6R1 65 aa3.31□□□□□ -1.88
ATG4A-208ENST00000489247 A0A1B0GVY2 172 aa3.3□□□□□ -1.88
ATG4A-208ENST00000489247 LINC00472Q9H8W2 130 aa3.3□□□□□ -1.88
ATG4A-208ENST00000489247 KMT2CQ8NEZ4 4911 aaKnown RBP3.29□□□□□ -1.88
ATG4A-208ENST00000489247 TRAV7A0A075B6U4 112 aa3.29□□□□□ -1.88
ATG4A-208ENST00000489247 A0A087WSZ3 146 aa3.29□□□□□ -1.88
ATG4A-208ENST00000489247 CCDC179H3BU77 68 aa3.29□□□□□ -1.88
ATG4A-208ENST00000489247 CD164Q04900 197 aa3.29□□□□□ -1.88
ATG4A-208ENST00000489247 FAM229BQ4G0N7 80 aa3.29□□□□□ -1.88
ATG4A-208ENST00000489247 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
ATG4A-208ENST00000489247 PKHD1L1Q86WI1 4243 aa3.28□□□□□ -1.88
ATG4A-208ENST00000489247 J3KT08 172 aa3.28□□□□□ -1.88
ATG4A-208ENST00000489247 MT3P25713 68 aa3.28□□□□□ -1.88
ATG4A-208ENST00000489247 SSBP3-AS1Q7Z2R9 100 aa3.28□□□□□ -1.88
ATG4A-208ENST00000489247 A0A0G2JQZ4 141 aa3.27□□□□□ -1.89
ATG4A-208ENST00000489247 OCR1Q9BZK8 76 aa3.27□□□□□ -1.89
ATG4A-208ENST00000489247 SS18L2Q9UHA2 77 aa3.27□□□□□ -1.89
ATG4A-208ENST00000489247 A8MWP4 228 aa3.26□□□□□ -1.89
ATG4A-208ENST00000489247 ASB16-AS1Q495Z4 193 aa3.26□□□□□ -1.89
ATG4A-208ENST00000489247 Q5XG85 94 aa3.26□□□□□ -1.89
ATG4A-208ENST00000489247 Q8N9L7 120 aa3.26□□□□□ -1.89
ATG4A-208ENST00000489247 Q96NJ1 140 aa3.26□□□□□ -1.89
ATG4A-208ENST00000489247 K7EQZ3 153 aa3.25□□□□□ -1.89
ATG4A-208ENST00000489247 KRTAP1-4P0C5Y4 121 aa3.25□□□□□ -1.89
ATG4A-208ENST00000489247 KLKP1Q107X0 134 aa3.25□□□□□ -1.89
ATG4A-208ENST00000489247 MOBPQ13875 183 aa3.25□□□□□ -1.89
ATG4A-208ENST00000489247 C9orf153Q5TBE3 101 aa3.25□□□□□ -1.89
ATG4A-208ENST00000489247 PRR15Q8IV56 129 aa3.25□□□□□ -1.89
ATG4A-208ENST00000489247 FAT1Q14517 4588 aa3.25□□□□□ -1.89
ATG4A-208ENST00000489247 HCG22E2RYF7 251 aa3.24□□□□□ -1.89
ATG4A-208ENST00000489247 SRRM2Q9UQ35 2752 aaKnown RBP3.24□□□□□ -1.89
ATG4A-208ENST00000489247 RYR3Q15413 4870 aa3.23□□□□□ -1.89
ATG4A-208ENST00000489247 KRTAP10-4P60372 401 aaPredicted RBP3.22□□□□□ -1.89
ATG4A-208ENST00000489247 KRTAP13-2Q52LG2 175 aa3.22□□□□□ -1.89
ATG4A-208ENST00000489247 SPINK6Q6UWN8 80 aa3.22□□□□□ -1.89
ATG4A-208ENST00000489247 ANAPC11Q9NYG5 84 aa3.22□□□□□ -1.89
ATG4A-208ENST00000489247 RYR1P21817 5038 aa3.21□□□□□ -1.9
ATG4A-208ENST00000489247 IGLV7-46A0A075B6I9 117 aa3.21□□□□□ -1.9
ATG4A-208ENST00000489247 MMP24-AS1A0A0U1RRL7 71 aa3.21□□□□□ -1.9
ATG4A-208ENST00000489247 NDUFC1O43677 76 aa3.21□□□□□ -1.9
ATG4A-208ENST00000489247 TMEM258P61165 79 aa3.21□□□□□ -1.9
ATG4A-208ENST00000489247 RPS29P62273 56 aaKnown RBP3.21□□□□□ -1.9
ATG4A-208ENST00000489247 CYSTM1Q9H1C7 97 aa3.21□□□□□ -1.9
ATG4A-208ENST00000489247 HSPG2P98160 4391 aa3.2□□□□□ -1.9
ATG4A-208ENST00000489247 A0A0U1RQV1 116 aa3.2□□□□□ -1.9
ATG4A-208ENST00000489247 NDUFB1O75438 58 aa3.2□□□□□ -1.9
ATG4A-208ENST00000489247 DEFB116Q30KQ4 102 aa3.2□□□□□ -1.9
ATG4A-208ENST00000489247 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
ATG4A-208ENST00000489247 C20orf197Q8N268 126 aa3.2□□□□□ -1.9
ATG4A-208ENST00000489247 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
ATG4A-208ENST00000489247 A0A1B0GVX0 72 aa3.19□□□□□ -1.9
ATG4A-208ENST00000489247 H7BZZ5 65 aa3.19□□□□□ -1.9
ATG4A-208ENST00000489247 C5orf47Q569G3 176 aa3.19□□□□□ -1.9
ATG4A-208ENST00000489247 CASC2Q6XLA1 102 aa3.19□□□□□ -1.9
ATG4A-208ENST00000489247 TMEM254Q8TBM7 123 aa3.19□□□□□ -1.9
ATG4A-208ENST00000489247 ZCCHC13Q8WW36 166 aaKnown RBP3.19□□□□□ -1.9
ATG4A-208ENST00000489247 C8orf17Q9NRJ1 99 aa3.19□□□□□ -1.9
ATG4A-208ENST00000489247 H3BPC8 53 aa3.18□□□□□ -1.9
ATG4A-208ENST00000489247 hDV103S1A0JD37 113 aa3.17□□□□□ -1.9
ATG4A-208ENST00000489247 C8orf87E5RJ46 101 aa3.17□□□□□ -1.9
ATG4A-208ENST00000489247 SPINK1P00995 79 aa3.17□□□□□ -1.9
ATG4A-208ENST00000489247 RPS28P62857 69 aaKnown RBP3.17□□□□□ -1.9
ATG4A-208ENST00000489247 SPAG11AQ6PDA7 123 aa3.17□□□□□ -1.9
ATG4A-208ENST00000489247 HRCT1Q6UXD1 115 aa3.17□□□□□ -1.9
ATG4A-208ENST00000489247 LIMD2Q9BT23 127 aa3.17□□□□□ -1.9
ATG4A-208ENST00000489247 TP53AIP1Q9HCN2 124 aa3.17□□□□□ -1.9
ATG4A-208ENST00000489247 ATP5EP56381 51 aaPredicted RBP3.16□□□□□ -1.9
ATG4A-208ENST00000489247 C1orf195Q5TG92 126 aa3.16□□□□□ -1.9
ATG4A-208ENST00000489247 WFDC13Q8IUB5 93 aa3.16□□□□□ -1.9
ATG4A-208ENST00000489247 TNXBP22105 4242 aa3.16□□□□□ -1.9
ATG4A-208ENST00000489247 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
ATG4A-208ENST00000489247 TYMSOSQ8TAI1 123 aa3.15□□□□□ -1.91
ATG4A-208ENST00000489247 MRPL34Q9BQ48 92 aaKnown RBP3.15□□□□□ -1.91
ATG4A-208ENST00000489247 FAM236DA0A1B0GTK5 79 aa3.14□□□□□ -1.91
ATG4A-208ENST00000489247 FAM236CP0DP71 79 aa3.14□□□□□ -1.91
ATG4A-208ENST00000489247 SNURFQ9Y675 71 aa3.14□□□□□ -1.91
ATG4A-208ENST00000489247 FAT3Q8TDW7 4589 aa3.13□□□□□ -1.91
ATG4A-208ENST00000489247 IGHV6-1A0A0B4J1U7 121 aa3.13□□□□□ -1.91
ATG4A-208ENST00000489247 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
ATG4A-208ENST00000489247 MP68P56378 58 aa3.13□□□□□ -1.91
ATG4A-208ENST00000489247 KRTAP13-3Q3SY46 172 aa3.13□□□□□ -1.91
ATG4A-208ENST00000489247 LINC00304Q8N9R0 145 aa3.13□□□□□ -1.91
ATG4A-208ENST00000489247 TRAV22A0A0B4J277 110 aa3.12□□□□□ -1.91
ATG4A-208ENST00000489247 KRTAP16-1A8MUX0 517 aa3.12□□□□□ -1.91
ATG4A-208ENST00000489247 SMR3BP02814 79 aaPredicted RBP3.12□□□□□ -1.91
ATG4A-208ENST00000489247 H0Y9P7 68 aa3.11□□□□□ -1.91
ATG4A-208ENST00000489247 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms