RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 KRTAP6-3Q3LI67 103 aa9.16□□□□□ -0.94
GGPS1-206ENST00000488594 C14orf144Q96I85 54 aa9.16□□□□□ -0.94
GGPS1-206ENST00000488594 TMEM256-PLSCR3K7ERE1 68 aa9.15□□□□□ -0.94
GGPS1-206ENST00000488594 TRIAP1O43715 76 aa9.15□□□□□ -0.94
GGPS1-206ENST00000488594 CEND1Q8N111 149 aa9.13□□□□□ -0.95
GGPS1-206ENST00000488594 C2orf91Q6ZV80 131 aa9.11□□□□□ -0.95
GGPS1-206ENST00000488594 Q8N9P0 234 aaPredicted RBP9.09□□□□□ -0.95
GGPS1-206ENST00000488594 J3KT08 172 aa9.08□□□□□ -0.96
GGPS1-206ENST00000488594 WFDC13Q8IUB5 93 aa9.08□□□□□ -0.96
GGPS1-206ENST00000488594 PAM16Q9Y3D7 125 aa9.08□□□□□ -0.96
GGPS1-206ENST00000488594 UBE2V1Q13404 147 aa9.07□□□□□ -0.96
GGPS1-206ENST00000488594 SPATA45Q537H7 98 aa9.07□□□□□ -0.96
GGPS1-206ENST00000488594 FXYD2P54710 66 aa9.05□□□□□ -0.96
GGPS1-206ENST00000488594 VPS25Q9BRG1 176 aa9.05□□□□□ -0.96
GGPS1-206ENST00000488594 COX6CP09669 75 aa9.04□□□□□ -0.96
GGPS1-206ENST00000488594 PSMB2P49721 201 aa9.04□□□□□ -0.96
GGPS1-206ENST00000488594 C21orf62-AS1Q17RA5 79 aa9.03□□□□□ -0.96
GGPS1-206ENST00000488594 VAMP8Q9BV40 100 aa9.01□□□□□ -0.97
GGPS1-206ENST00000488594 NDUFB1O75438 58 aa9□□□□□ -0.97
GGPS1-206ENST00000488594 RBM3P98179 157 aaKnown RBP9□□□□□ -0.97
GGPS1-206ENST00000488594 LYRM7Q5U5X0 104 aa9□□□□□ -0.97
GGPS1-206ENST00000488594 DSCR8Q96T75 97 aa9□□□□□ -0.97
GGPS1-206ENST00000488594 S100A1P23297 94 aa8.99□□□□□ -0.97
GGPS1-206ENST00000488594 NEBP20929 6669 aa8.95□□□□□ -0.98
GGPS1-206ENST00000488594 Q6ZQT0 140 aa8.94□□□□□ -0.98
GGPS1-206ENST00000488594 K7ERJ3 54 aa8.93□□□□□ -0.98
GGPS1-206ENST00000488594 C8orf17Q9NRJ1 99 aa8.93□□□□□ -0.98
GGPS1-206ENST00000488594 C9JAW5 83 aa8.92□□□□□ -0.98
GGPS1-206ENST00000488594 H1FX-AS1Q4G0G2 97 aa8.92□□□□□ -0.98
GGPS1-206ENST00000488594 IGKV3D-7A0A0C4DH55 119 aa8.9□□□□□ -0.98
GGPS1-206ENST00000488594 HSD52Q0P140 79 aa8.9□□□□□ -0.98
GGPS1-206ENST00000488594 LOC100996750A0A140TA64 210 aa8.88□□□□□ -0.99
GGPS1-206ENST00000488594 KRTAP4-6Q9BYQ5 205 aa8.88□□□□□ -0.99
GGPS1-206ENST00000488594 Q6ZVQ6 151 aa8.87□□□□□ -0.99
GGPS1-206ENST00000488594 A0A1B0GW54 56 aa8.84□□□□□ -0.99
GGPS1-206ENST00000488594 SCGB1C2P0DMR2 95 aa8.84□□□□□ -0.99
GGPS1-206ENST00000488594 BAALC-AS2P0C853 105 aa8.83□□□□□ -1
GGPS1-206ENST00000488594 PRR15Q8IV56 129 aa8.79□□□□□ -1
GGPS1-206ENST00000488594 MRPL34Q9BQ48 92 aaKnown RBP8.77□□□□□ -1.01
GGPS1-206ENST00000488594 JMJD7-PLA2G4BH0Y9G9 81 aa8.76□□□□□ -1.01
GGPS1-206ENST00000488594 TMEM254Q8TBM7 123 aa8.76□□□□□ -1.01
GGPS1-206ENST00000488594 LOC110117498A0A087WWA1 95 aa8.75□□□□□ -1.01
GGPS1-206ENST00000488594 A6NN06 94 aa8.75□□□□□ -1.01
GGPS1-206ENST00000488594 PDE6GP18545 87 aa8.74□□□□□ -1.01
GGPS1-206ENST00000488594 MMP24-AS1A0A0U1RRL7 71 aa8.73□□□□□ -1.01
GGPS1-206ENST00000488594 MUC12Q9UKN1 5478 aa8.7□□□□□ -1.02
GGPS1-206ENST00000488594 NDUFS5O43920 106 aa8.7□□□□□ -1.02
GGPS1-206ENST00000488594 IGKV2D-30A0A075B6S6 120 aa8.69□□□□□ -1.02
GGPS1-206ENST00000488594 IGKV2-30P06310 120 aa8.69□□□□□ -1.02
GGPS1-206ENST00000488594 C7orf65Q6ZTY9 151 aa8.69□□□□□ -1.02
GGPS1-206ENST00000488594 hDV103S1A0JD37 113 aa8.68□□□□□ -1.02
GGPS1-206ENST00000488594 NREPQ16612 68 aa8.68□□□□□ -1.02
GGPS1-206ENST00000488594 KRTAP20-1Q3LI63 56 aa8.68□□□□□ -1.02
GGPS1-206ENST00000488594 UQCR10Q9UDW1 63 aa8.67□□□□□ -1.02
GGPS1-206ENST00000488594 ATXN8Q156A1 80 aa8.66□□□□□ -1.02
GGPS1-206ENST00000488594 PYY3Q5JQD4 70 aa8.65□□□□□ -1.02
GGPS1-206ENST00000488594 Q5VV11 94 aa8.65□□□□□ -1.02
GGPS1-206ENST00000488594 FAM236AA0A1B0GUQ0 79 aa8.63□□□□□ -1.03
GGPS1-206ENST00000488594 FAM236BA0A1B0GV22 79 aa8.63□□□□□ -1.03
GGPS1-206ENST00000488594 MT1BP07438 61 aa8.63□□□□□ -1.03
GGPS1-206ENST00000488594 C14orf132Q9NPU4 83 aa8.63□□□□□ -1.03
GGPS1-206ENST00000488594 K7EQZ3 153 aa8.61□□□□□ -1.03
GGPS1-206ENST00000488594 Q5W150 140 aa8.6□□□□□ -1.03
GGPS1-206ENST00000488594 C4orf26Q17RF5 130 aa8.59□□□□□ -1.03
GGPS1-206ENST00000488594 C5orf47Q569G3 176 aa8.59□□□□□ -1.03
GGPS1-206ENST00000488594 KRTAP19-8Q3LI54 63 aa8.58□□□□□ -1.04
GGPS1-206ENST00000488594 SPRR2GQ9BYE4 73 aa8.58□□□□□ -1.04
GGPS1-206ENST00000488594 KRTAP5-9P26371 169 aa8.56□□□□□ -1.04
GGPS1-206ENST00000488594 KRTAP10-5P60370 271 aa8.56□□□□□ -1.04
GGPS1-206ENST00000488594 CSAG1Q6PB30 78 aa8.5□□□□□ -1.05
GGPS1-206ENST00000488594 BPY2O14599 106 aa8.49□□□□□ -1.05
GGPS1-206ENST00000488594 NAA38Q9BRA0 125 aaKnown RBP8.48□□□□□ -1.05
GGPS1-206ENST00000488594 S4R3F8 94 aa8.48□□□□□ -1.05
GGPS1-206ENST00000488594 HCG22E2RYF7 251 aa8.47□□□□□ -1.05
GGPS1-206ENST00000488594 CASC2Q6XLA1 102 aa8.47□□□□□ -1.05
GGPS1-206ENST00000488594 KMT2DO14686 5537 aa8.45□□□□□ -1.06
GGPS1-206ENST00000488594 M0R143 59 aa8.45□□□□□ -1.06
GGPS1-206ENST00000488594 CXCL6P80162 114 aa8.45□□□□□ -1.06
GGPS1-206ENST00000488594 KRTAP3-1Q9BYR8 98 aa8.43□□□□□ -1.06
GGPS1-206ENST00000488594 MDN1Q9NU22 5596 aa8.41□□□□□ -1.06
GGPS1-206ENST00000488594 KLKP1Q107X0 134 aa8.41□□□□□ -1.06
GGPS1-206ENST00000488594 LCA10Q71F78 164 aa8.4□□□□□ -1.06
GGPS1-206ENST00000488594 Q8N9L7 120 aa8.38□□□□□ -1.07
GGPS1-206ENST00000488594 C1orf64Q8NEQ6 169 aa8.37□□□□□ -1.07
GGPS1-206ENST00000488594 IMUPQ9GZP8 106 aa8.35□□□□□ -1.07
GGPS1-206ENST00000488594 KRTAP2-3P0C7H8 128 aa8.35□□□□□ -1.07
GGPS1-206ENST00000488594 KRTAP2-4Q9BYR9 128 aa8.35□□□□□ -1.07
GGPS1-206ENST00000488594 H3BT86 120 aa8.33□□□□□ -1.08
GGPS1-206ENST00000488594 CRIPTQ9P021 101 aa8.31□□□□□ -1.08
GGPS1-206ENST00000488594 TSTD3H0UI37 97 aa8.26□□□□□ -1.09
GGPS1-206ENST00000488594 TMA7Q9Y2S6 64 aaKnown RBP8.23□□□□□ -1.09
GGPS1-206ENST00000488594 SPRR2FQ96RM1 72 aa8.19□□□□□ -1.1
GGPS1-206ENST00000488594 TP53AIP1Q9HCN2 124 aa8.18□□□□□ -1.1
GGPS1-206ENST00000488594 SPRR2EP22531 72 aa8.17□□□□□ -1.1
GGPS1-206ENST00000488594 SPRR2BP35325 72 aa8.17□□□□□ -1.1
GGPS1-206ENST00000488594 SPRR2AP35326 72 aa8.17□□□□□ -1.1
GGPS1-206ENST00000488594 UBL5Q9BZL1 73 aa8.15□□□□□ -1.1
GGPS1-206ENST00000488594 C9orf118A6NHY6 69 aa8.14□□□□□ -1.11
GGPS1-206ENST00000488594 BATFQ16520 125 aa8.14□□□□□ -1.11
GGPS1-206ENST00000488594 A0A1W2PPM0 123 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms