RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 C1orf64Q8NEQ6 169 aa11.87□□□□□ -0.51
NECAB3-213ENST00000488489 SSBP3-AS1Q7Z2R9 100 aa11.86□□□□□ -0.51
NECAB3-213ENST00000488489 CYP4F30PQ9H0H9 118 aa11.86□□□□□ -0.51
NECAB3-213ENST00000488489 SPINK6Q6UWN8 80 aa11.86□□□□□ -0.51
NECAB3-213ENST00000488489 NDUFB1O75438 58 aa11.84□□□□□ -0.51
NECAB3-213ENST00000488489 MP68P56378 58 aa11.84□□□□□ -0.51
NECAB3-213ENST00000488489 HSPG2P98160 4391 aa11.84□□□□□ -0.51
NECAB3-213ENST00000488489 PLA2G1BP04054 148 aaKnown RBP11.83□□□□□ -0.52
NECAB3-213ENST00000488489 PRR15Q8IV56 129 aa11.83□□□□□ -0.52
NECAB3-213ENST00000488489 Q96NJ1 140 aa11.82□□□□□ -0.52
NECAB3-213ENST00000488489 A8MWP4 228 aa11.81□□□□□ -0.52
NECAB3-213ENST00000488489 CASC2Q6XLA1 102 aa11.81□□□□□ -0.52
NECAB3-213ENST00000488489 TRAV22A0A0B4J277 110 aa11.8□□□□□ -0.52
NECAB3-213ENST00000488489 BRK1Q8WUW1 75 aa11.78□□□□□ -0.52
NECAB3-213ENST00000488489 EPPK1P58107 5090 aaKnown RBP11.77□□□□□ -0.52
NECAB3-213ENST00000488489 CD164Q04900 197 aa11.77□□□□□ -0.52
NECAB3-213ENST00000488489 RYR1P21817 5038 aa11.77□□□□□ -0.53
NECAB3-213ENST00000488489 H3BPC8 53 aa11.77□□□□□ -0.53
NECAB3-213ENST00000488489 Q1T7F1 81 aa11.77□□□□□ -0.53
NECAB3-213ENST00000488489 LINC00208Q96KT6 92 aa11.77□□□□□ -0.53
NECAB3-213ENST00000488489 H0Y9P7 68 aa11.75□□□□□ -0.53
NECAB3-213ENST00000488489 PRR4Q16378 134 aa11.75□□□□□ -0.53
NECAB3-213ENST00000488489 KIAA1109Q2LD37 5005 aa11.71□□□□□ -0.53
NECAB3-213ENST00000488489 PRR26Q8N8Z3 221 aa11.71□□□□□ -0.54
NECAB3-213ENST00000488489 SPANXA2-OT1Q8N9U9 137 aa11.71□□□□□ -0.54
NECAB3-213ENST00000488489 CDK2AP2O75956 126 aa11.7□□□□□ -0.54
NECAB3-213ENST00000488489 TYMSOSQ8TAI1 123 aa11.7□□□□□ -0.54
NECAB3-213ENST00000488489 PKHD1L1Q86WI1 4243 aa11.69□□□□□ -0.54
NECAB3-213ENST00000488489 MMP24-AS1A0A0U1RRL7 71 aa11.69□□□□□ -0.54
NECAB3-213ENST00000488489 FAM229AH3BQW9 127 aa11.65□□□□□ -0.55
NECAB3-213ENST00000488489 KRTAP17-1Q9BYP8 105 aa11.64□□□□□ -0.55
NECAB3-213ENST00000488489 ASB16-AS1Q495Z4 193 aa11.62□□□□□ -0.55
NECAB3-213ENST00000488489 Q5VSD8 79 aa11.61□□□□□ -0.55
NECAB3-213ENST00000488489 V9GYY9 64 aa11.59□□□□□ -0.55
NECAB3-213ENST00000488489 LRP1Q07954 4544 aaKnown RBP11.58□□□□□ -0.56
NECAB3-213ENST00000488489 C4orf48Q5BLP8 95 aa11.58□□□□□ -0.56
NECAB3-213ENST00000488489 A0A1B0GVX0 72 aa11.57□□□□□ -0.56
NECAB3-213ENST00000488489 C1orf195Q5TG92 126 aa11.57□□□□□ -0.56
NECAB3-213ENST00000488489 IGHV6-1A0A0B4J1U7 121 aa11.56□□□□□ -0.56
NECAB3-213ENST00000488489 PSPHP1O15172 72 aa11.56□□□□□ -0.56
NECAB3-213ENST00000488489 SPINK1P00995 79 aa11.56□□□□□ -0.56
NECAB3-213ENST00000488489 LINC00304Q8N9R0 145 aa11.56□□□□□ -0.56
NECAB3-213ENST00000488489 TP53AIP1Q9HCN2 124 aa11.54□□□□□ -0.56
NECAB3-213ENST00000488489 NOTCH2NLQ7Z3S9 236 aa11.54□□□□□ -0.56
NECAB3-213ENST00000488489 LIMD2Q9BT23 127 aa11.53□□□□□ -0.56
NECAB3-213ENST00000488489 C8orf17Q9NRJ1 99 aa11.53□□□□□ -0.56
NECAB3-213ENST00000488489 TNXBP22105 4242 aa11.5□□□□□ -0.57
NECAB3-213ENST00000488489 IGLV7-46A0A075B6I9 117 aa11.5□□□□□ -0.57
NECAB3-213ENST00000488489 A8MUN3 132 aa11.5□□□□□ -0.57
NECAB3-213ENST00000488489 SPAG11AQ6PDA7 123 aa11.48□□□□□ -0.57
NECAB3-213ENST00000488489 Q8N9P0 234 aaPredicted RBP11.47□□□□□ -0.57
NECAB3-213ENST00000488489 FLG2Q5D862 2391 aaPredicted RBP11.46□□□□□ -0.57
NECAB3-213ENST00000488489 RPS29P62273 56 aaKnown RBP11.45□□□□□ -0.58
NECAB3-213ENST00000488489 Q5VV11 94 aa11.45□□□□□ -0.58
NECAB3-213ENST00000488489 FAT3Q8TDW7 4589 aa11.44□□□□□ -0.58
NECAB3-213ENST00000488489 COA5Q86WW8 74 aa11.44□□□□□ -0.58
NECAB3-213ENST00000488489 Q8N1X5 172 aa11.43□□□□□ -0.58
NECAB3-213ENST00000488489 MYCBP2O75592 4640 aa11.42□□□□□ -0.58
NECAB3-213ENST00000488489 PCOTHQ58A44 107 aa11.42□□□□□ -0.58
NECAB3-213ENST00000488489 MRPL34Q9BQ48 92 aaKnown RBP11.41□□□□□ -0.58
NECAB3-213ENST00000488489 NDUFS5O43920 106 aa11.39□□□□□ -0.59
NECAB3-213ENST00000488489 KRTAP10-8P60410 259 aa11.38□□□□□ -0.59
NECAB3-213ENST00000488489 PRR15LQ9BU68 103 aa11.36□□□□□ -0.59
NECAB3-213ENST00000488489 C8orf87E5RJ46 101 aa11.35□□□□□ -0.59
NECAB3-213ENST00000488489 LINC00313P59037 77 aa11.35□□□□□ -0.59
NECAB3-213ENST00000488489 CHKB-CPT1BH3BT56 60 aa11.32□□□□□ -0.6
NECAB3-213ENST00000488489 LOC101927531A0A1B0GV80 90 aa11.31□□□□□ -0.6
NECAB3-213ENST00000488489 Q75L30 129 aa11.3□□□□□ -0.6
NECAB3-213ENST00000488489 DMBT1Q9UGM3 2413 aaPredicted RBP11.29□□□□□ -0.6
NECAB3-213ENST00000488489 KRTAP16-1A8MUX0 517 aa11.27□□□□□ -0.6
NECAB3-213ENST00000488489 RETNLBQ9BQ08 111 aa11.27□□□□□ -0.6
NECAB3-213ENST00000488489 BIRC6Q9NR09 4857 aa11.27□□□□□ -0.61
NECAB3-213ENST00000488489 A8MU10 97 aa11.26□□□□□ -0.61
NECAB3-213ENST00000488489 KRTAP4-5Q9BYR2 181 aa11.25□□□□□ -0.61
NECAB3-213ENST00000488489 HRES1P13985 223 aa11.23□□□□□ -0.61
NECAB3-213ENST00000488489 KRTAP13-3Q3SY46 172 aa11.23□□□□□ -0.61
NECAB3-213ENST00000488489 LINC01558Q9Y6Z2 57 aa11.23□□□□□ -0.61
NECAB3-213ENST00000488489 MT1HL1P0DM35 61 aa11.22□□□□□ -0.61
NECAB3-213ENST00000488489 PMAIP1Q13794 54 aa11.2□□□□□ -0.62
NECAB3-213ENST00000488489 Q5W150 140 aa11.2□□□□□ -0.62
NECAB3-213ENST00000488489 A6NED7 52 aa11.17□□□□□ -0.62
NECAB3-213ENST00000488489 ABCA13Q86UQ4 5058 aa11.15□□□□□ -0.62
NECAB3-213ENST00000488489 LCA10Q71F78 164 aa11.15□□□□□ -0.62
NECAB3-213ENST00000488489 HERC2O95714 4834 aa11.13□□□□□ -0.63
NECAB3-213ENST00000488489 C9orf92A6NGG3 77 aa11.12□□□□□ -0.63
NECAB3-213ENST00000488489 CDC42SE1Q9NRR8 79 aa11.09□□□□□ -0.63
NECAB3-213ENST00000488489 ATP11AUNQ6ZP68 121 aa11.09□□□□□ -0.63
NECAB3-213ENST00000488489 SPTSSBQ8NFR3 76 aa11.05□□□□□ -0.64
NECAB3-213ENST00000488489 ACYP2P14621 99 aa11.03□□□□□ -0.64
NECAB3-213ENST00000488489 DMAC1Q96GE9 116 aa11□□□□□ -0.65
NECAB3-213ENST00000488489 SPINK7P58062 85 aa10.99□□□□□ -0.65
NECAB3-213ENST00000488489 C20orf166-AS1Q96NR2 134 aa10.99□□□□□ -0.65
NECAB3-213ENST00000488489 A8MUU9 505 aa10.97□□□□□ -0.65
NECAB3-213ENST00000488489 SEC61GP60059 68 aa10.97□□□□□ -0.65
NECAB3-213ENST00000488489 IGKV2-30P06310 120 aa10.96□□□□□ -0.65
NECAB3-213ENST00000488489 A6NN06 94 aa10.95□□□□□ -0.66
NECAB3-213ENST00000488489 KTN1-AS1Q86SY8 53 aa10.95□□□□□ -0.66
NECAB3-213ENST00000488489 IGKV2D-30A0A075B6S6 120 aa10.85□□□□□ -0.67
NECAB3-213ENST00000488489 XP32Q5T750 250 aa10.81□□□□□ -0.68
NECAB3-213ENST00000488489 A0A1B0GU69 56 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms