RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 BPY2O14599 106 aa7.03□□□□□ -1.28
HLA-DOB-209ENST00000488325 KRTAP10-8P60410 259 aa7.01□□□□□ -1.29
HLA-DOB-209ENST00000488325 PRR26Q8N8Z3 221 aa7.01□□□□□ -1.29
HLA-DOB-209ENST00000488325 J3KT08 172 aa6.99□□□□□ -1.29
HLA-DOB-209ENST00000488325 SPAG11AQ6PDA7 123 aa6.99□□□□□ -1.29
HLA-DOB-209ENST00000488325 LIMD2Q9BT23 127 aa6.99□□□□□ -1.29
HLA-DOB-209ENST00000488325 LINC00304Q8N9R0 145 aa6.98□□□□□ -1.29
HLA-DOB-209ENST00000488325 SPINK1P00995 79 aa6.97□□□□□ -1.29
HLA-DOB-209ENST00000488325 ASB16-AS1Q495Z4 193 aa6.97□□□□□ -1.29
HLA-DOB-209ENST00000488325 Q5XG85 94 aa6.97□□□□□ -1.29
HLA-DOB-209ENST00000488325 SCGB1A1P11684 91 aa6.96□□□□□ -1.3
HLA-DOB-209ENST00000488325 HIST1H4AP62805 103 aaKnown RBP6.96□□□□□ -1.3
HLA-DOB-209ENST00000488325 LINC00472Q9H8W2 130 aa6.96□□□□□ -1.3
HLA-DOB-209ENST00000488325 LOC100996750A0A140TA64 210 aa6.95□□□□□ -1.3
HLA-DOB-209ENST00000488325 RPS29P62273 56 aaKnown RBP6.95□□□□□ -1.3
HLA-DOB-209ENST00000488325 KRTAP4-6Q9BYQ5 205 aa6.95□□□□□ -1.3
HLA-DOB-209ENST00000488325 NDUFB1O75438 58 aa6.92□□□□□ -1.3
HLA-DOB-209ENST00000488325 IGKV4-1P06312 121 aa6.92□□□□□ -1.3
HLA-DOB-209ENST00000488325 DSCR10P59022 87 aa6.92□□□□□ -1.3
HLA-DOB-209ENST00000488325 DEFB116Q30KQ4 102 aa6.92□□□□□ -1.3
HLA-DOB-209ENST00000488325 Q96NJ1 140 aa6.92□□□□□ -1.3
HLA-DOB-209ENST00000488325 A8MWP4 228 aa6.91□□□□□ -1.3
HLA-DOB-209ENST00000488325 A0A087WVE0 104 aa6.89□□□□□ -1.31
HLA-DOB-209ENST00000488325 Q8N9L7 120 aa6.89□□□□□ -1.31
HLA-DOB-209ENST00000488325 FAM236AA0A1B0GUQ0 79 aa6.88□□□□□ -1.31
HLA-DOB-209ENST00000488325 FAM236BA0A1B0GV22 79 aa6.88□□□□□ -1.31
HLA-DOB-209ENST00000488325 K7EQZ3 153 aa6.88□□□□□ -1.31
HLA-DOB-209ENST00000488325 PRR15Q8IV56 129 aa6.88□□□□□ -1.31
HLA-DOB-209ENST00000488325 C1orf195Q5TG92 126 aa6.86□□□□□ -1.31
HLA-DOB-209ENST00000488325 A0A1B0GVX0 72 aa6.84□□□□□ -1.31
HLA-DOB-209ENST00000488325 HCG22E2RYF7 251 aa6.83□□□□□ -1.32
HLA-DOB-209ENST00000488325 ATOX1O00244 68 aa6.83□□□□□ -1.32
HLA-DOB-209ENST00000488325 IGHV6-1A0A0B4J1U7 121 aa6.81□□□□□ -1.32
HLA-DOB-209ENST00000488325 C8orf87E5RJ46 101 aa6.81□□□□□ -1.32
HLA-DOB-209ENST00000488325 PRR4Q16378 134 aa6.8□□□□□ -1.32
HLA-DOB-209ENST00000488325 SMIM20Q8N5G0 67 aa6.8□□□□□ -1.32
HLA-DOB-209ENST00000488325 C8orf17Q9NRJ1 99 aa6.8□□□□□ -1.32
HLA-DOB-209ENST00000488325 ANAPC13Q9BS18 74 aa6.79□□□□□ -1.32
HLA-DOB-209ENST00000488325 MMP24-AS1A0A0U1RRL7 71 aa6.78□□□□□ -1.32
HLA-DOB-209ENST00000488325 CASC2Q6XLA1 102 aa6.78□□□□□ -1.32
HLA-DOB-209ENST00000488325 WFDC13Q8IUB5 93 aa6.78□□□□□ -1.32
HLA-DOB-209ENST00000488325 hDV103S1A0JD37 113 aa6.77□□□□□ -1.33
HLA-DOB-209ENST00000488325 KRTAP9-7A8MTY7 169 aa6.75□□□□□ -1.33
HLA-DOB-209ENST00000488325 TMEM254Q8TBM7 123 aa6.75□□□□□ -1.33
HLA-DOB-209ENST00000488325 LINC00313P59037 77 aa6.74□□□□□ -1.33
HLA-DOB-209ENST00000488325 TRAV7A0A075B6U4 112 aa6.73□□□□□ -1.33
HLA-DOB-209ENST00000488325 PCP4P48539 62 aa6.73□□□□□ -1.33
HLA-DOB-209ENST00000488325 FP248Q71RG6 208 aaPredicted RBP6.72□□□□□ -1.33
HLA-DOB-209ENST00000488325 SERP2Q8N6R1 65 aa6.72□□□□□ -1.33
HLA-DOB-209ENST00000488325 MRPL34Q9BQ48 92 aaKnown RBP6.72□□□□□ -1.33
HLA-DOB-209ENST00000488325 XP32Q5T750 250 aa6.7□□□□□ -1.34
HLA-DOB-209ENST00000488325 NOTCH2NLQ7Z3S9 236 aa6.7□□□□□ -1.34
HLA-DOB-209ENST00000488325 RETNLBQ9BQ08 111 aa6.7□□□□□ -1.34
HLA-DOB-209ENST00000488325 COX7CP15954 63 aa6.69□□□□□ -1.34
HLA-DOB-209ENST00000488325 OCR1Q9BZK8 76 aa6.69□□□□□ -1.34
HLA-DOB-209ENST00000488325 UQCRQO14949 82 aa6.68□□□□□ -1.34
HLA-DOB-209ENST00000488325 TP53AIP1Q9HCN2 124 aa6.68□□□□□ -1.34
HLA-DOB-209ENST00000488325 NDUFS5O43920 106 aa6.67□□□□□ -1.34
HLA-DOB-209ENST00000488325 KRTAP16-1A8MUX0 517 aa6.64□□□□□ -1.35
HLA-DOB-209ENST00000488325 Q8N9P0 234 aaPredicted RBP6.64□□□□□ -1.35
HLA-DOB-209ENST00000488325 MUC17Q685J3 4493 aa6.63□□□□□ -1.35
HLA-DOB-209ENST00000488325 IGLV7-46A0A075B6I9 117 aa6.63□□□□□ -1.35
HLA-DOB-209ENST00000488325 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.62□□□□□ -1.35
HLA-DOB-209ENST00000488325 C5orf47Q569G3 176 aa6.62□□□□□ -1.35
HLA-DOB-209ENST00000488325 C9orf92A6NGG3 77 aa6.61□□□□□ -1.35
HLA-DOB-209ENST00000488325 MP68P56378 58 aa6.61□□□□□ -1.35
HLA-DOB-209ENST00000488325 TRAV22A0A0B4J277 110 aa6.59□□□□□ -1.35
HLA-DOB-209ENST00000488325 CCDC179H3BU77 68 aa6.59□□□□□ -1.35
HLA-DOB-209ENST00000488325 H0Y9P7 68 aa6.58□□□□□ -1.36
HLA-DOB-209ENST00000488325 H3BPC8 53 aa6.58□□□□□ -1.36
HLA-DOB-209ENST00000488325 C20orf197Q8N268 126 aa6.58□□□□□ -1.36
HLA-DOB-209ENST00000488325 C20orf166-AS1Q96NR2 134 aa6.57□□□□□ -1.36
HLA-DOB-209ENST00000488325 A8MUU9 505 aa6.55□□□□□ -1.36
HLA-DOB-209ENST00000488325 KRTAP13-3Q3SY46 172 aa6.55□□□□□ -1.36
HLA-DOB-209ENST00000488325 KLKP1Q107X0 134 aa6.54□□□□□ -1.36
HLA-DOB-209ENST00000488325 TPRXLQ17RH7 258 aa6.53□□□□□ -1.36
HLA-DOB-209ENST00000488325 Q75L30 129 aa6.53□□□□□ -1.36
HLA-DOB-209ENST00000488325 LINC00208Q96KT6 92 aa6.52□□□□□ -1.37
HLA-DOB-209ENST00000488325 SNURFQ9Y675 71 aa6.52□□□□□ -1.37
HLA-DOB-209ENST00000488325 NDUFC1O43677 76 aa6.51□□□□□ -1.37
HLA-DOB-209ENST00000488325 C1orf64Q8NEQ6 169 aa6.51□□□□□ -1.37
HLA-DOB-209ENST00000488325 ZCCHC13Q8WW36 166 aaKnown RBP6.51□□□□□ -1.37
HLA-DOB-209ENST00000488325 Q5W150 140 aa6.5□□□□□ -1.37
HLA-DOB-209ENST00000488325 LOC101927531A0A1B0GV80 90 aa6.49□□□□□ -1.37
HLA-DOB-209ENST00000488325 SVIPQ8NHG7 77 aa6.48□□□□□ -1.37
HLA-DOB-209ENST00000488325 RPL37P61927 97 aaKnown RBP6.47□□□□□ -1.37
HLA-DOB-209ENST00000488325 ATP11AUNQ6ZP68 121 aa6.45□□□□□ -1.38
HLA-DOB-209ENST00000488325 IGKV2-30P06310 120 aa6.43□□□□□ -1.38
HLA-DOB-209ENST00000488325 KRTAP4-8Q9BYQ9 185 aa6.43□□□□□ -1.38
HLA-DOB-209ENST00000488325 H7BZZ5 65 aa6.42□□□□□ -1.38
HLA-DOB-209ENST00000488325 TMEM258P61165 79 aa6.42□□□□□ -1.38
HLA-DOB-209ENST00000488325 KRTAP4-1Q9BYQ7 146 aa6.42□□□□□ -1.38
HLA-DOB-209ENST00000488325 CYSTM1Q9H1C7 97 aa6.42□□□□□ -1.38
HLA-DOB-209ENST00000488325 C7orf65Q6ZTY9 151 aa6.41□□□□□ -1.38
HLA-DOB-209ENST00000488325 CYP4F30PQ9H0H9 118 aa6.41□□□□□ -1.38
HLA-DOB-209ENST00000488325 IGKV2D-30A0A075B6S6 120 aa6.4□□□□□ -1.38
HLA-DOB-209ENST00000488325 ATP5EP56381 51 aaPredicted RBP6.38□□□□□ -1.39
HLA-DOB-209ENST00000488325 PCOTHQ58A44 107 aa6.38□□□□□ -1.39
HLA-DOB-209ENST00000488325 SPANXA2-OT1Q8N9U9 137 aa6.36□□□□□ -1.39
HLA-DOB-209ENST00000488325 FAM236DA0A1B0GTK5 79 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms