RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 ATP11AUNQ6ZP68 121 aa8.41□□□□□ -1.06
COPS7B-221ENST00000488111 LCA10Q71F78 164 aa8.4□□□□□ -1.06
COPS7B-221ENST00000488111 A0A087WSZ3 146 aa8.4□□□□□ -1.07
COPS7B-221ENST00000488111 RPL37AP61513 92 aaKnown RBP8.39□□□□□ -1.07
COPS7B-221ENST00000488111 CASC2Q6XLA1 102 aa8.39□□□□□ -1.07
COPS7B-221ENST00000488111 PLAC8Q9NZF1 115 aa8.39□□□□□ -1.07
COPS7B-221ENST00000488111 CIRBP-AS1Q8TBR5 109 aa8.38□□□□□ -1.07
COPS7B-221ENST00000488111 REG3GQ6UW15 175 aa8.37□□□□□ -1.07
COPS7B-221ENST00000488111 LRP1BQ9NZR2 4599 aa8.37□□□□□ -1.07
COPS7B-221ENST00000488111 RBM12B-AS1Q9P1G2 102 aa8.37□□□□□ -1.07
COPS7B-221ENST00000488111 A6NN06 94 aa8.36□□□□□ -1.07
COPS7B-221ENST00000488111 DYNC1H1Q14204 4646 aaKnown RBP8.36□□□□□ -1.07
COPS7B-221ENST00000488111 NDUFS5O43920 106 aa8.36□□□□□ -1.07
COPS7B-221ENST00000488111 Q6ZSA8 131 aa8.36□□□□□ -1.07
COPS7B-221ENST00000488111 COA5Q86WW8 74 aa8.36□□□□□ -1.07
COPS7B-221ENST00000488111 SPTSSBQ8NFR3 76 aa8.36□□□□□ -1.07
COPS7B-221ENST00000488111 IGLV7-46A0A075B6I9 117 aa8.34□□□□□ -1.07
COPS7B-221ENST00000488111 A6NED7 52 aa8.34□□□□□ -1.07
COPS7B-221ENST00000488111 A8MWP4 228 aa8.33□□□□□ -1.08
COPS7B-221ENST00000488111 CDC42SE1Q9NRR8 79 aa8.33□□□□□ -1.08
COPS7B-221ENST00000488111 H3BS24 57 aa8.31□□□□□ -1.08
COPS7B-221ENST00000488111 LINC00472Q9H8W2 130 aa8.3□□□□□ -1.08
COPS7B-221ENST00000488111 PRLHP81277 87 aa8.3□□□□□ -1.08
COPS7B-221ENST00000488111 PSORS1C2Q9UIG4 136 aa8.29□□□□□ -1.08
COPS7B-221ENST00000488111 LINC01558Q9Y6Z2 57 aa8.28□□□□□ -1.08
COPS7B-221ENST00000488111 MMP24-AS1A0A0U1RRL7 71 aa8.27□□□□□ -1.09
COPS7B-221ENST00000488111 APOBP04114 4563 aaKnown RBP8.25□□□□□ -1.09
COPS7B-221ENST00000488111 C7orf65Q6ZTY9 151 aa8.25□□□□□ -1.09
COPS7B-221ENST00000488111 MOBPQ13875 183 aa8.24□□□□□ -1.09
COPS7B-221ENST00000488111 SPRR1BP22528 89 aa8.24□□□□□ -1.09
COPS7B-221ENST00000488111 SMR3BP02814 79 aaPredicted RBP8.23□□□□□ -1.09
COPS7B-221ENST00000488111 EPPK1P58107 5090 aaKnown RBP8.21□□□□□ -1.09
COPS7B-221ENST00000488111 ASB16-AS1Q495Z4 193 aa8.21□□□□□ -1.1
COPS7B-221ENST00000488111 PCOTHQ58A44 107 aa8.2□□□□□ -1.1
COPS7B-221ENST00000488111 SPAG11AQ6PDA7 123 aa8.2□□□□□ -1.1
COPS7B-221ENST00000488111 KRTAP13-1Q8IUC0 172 aa8.2□□□□□ -1.1
COPS7B-221ENST00000488111 SRRM2Q9UQ35 2752 aaKnown RBP8.19□□□□□ -1.1
COPS7B-221ENST00000488111 H0Y9J4 135 aa8.19□□□□□ -1.1
COPS7B-221ENST00000488111 TP53AIP1Q9HCN2 124 aa8.19□□□□□ -1.1
COPS7B-221ENST00000488111 VPS13BQ7Z7G8 4022 aa8.18□□□□□ -1.1
COPS7B-221ENST00000488111 IGLV7-43P04211 117 aa8.18□□□□□ -1.1
COPS7B-221ENST00000488111 SPINK7P58062 85 aa8.17□□□□□ -1.1
COPS7B-221ENST00000488111 ZNF861PO60384 105 aa8.17□□□□□ -1.1
COPS7B-221ENST00000488111 C8orf87E5RJ46 101 aa8.15□□□□□ -1.1
COPS7B-221ENST00000488111 FAT1Q14517 4588 aa8.15□□□□□ -1.1
COPS7B-221ENST00000488111 HRES1P13985 223 aa8.15□□□□□ -1.1
COPS7B-221ENST00000488111 Q96NJ1 140 aa8.13□□□□□ -1.11
COPS7B-221ENST00000488111 PRR26Q8N8Z3 221 aa8.11□□□□□ -1.11
COPS7B-221ENST00000488111 C8orf17Q9NRJ1 99 aa8.11□□□□□ -1.11
COPS7B-221ENST00000488111 HSPG2P98160 4391 aa8.1□□□□□ -1.11
COPS7B-221ENST00000488111 ANAPC11Q9NYG5 84 aa8.1□□□□□ -1.11
COPS7B-221ENST00000488111 RYR1P21817 5038 aa8.09□□□□□ -1.11
COPS7B-221ENST00000488111 CDK2AP2O75956 126 aa8.08□□□□□ -1.12
COPS7B-221ENST00000488111 KIAA1109Q2LD37 5005 aa8.08□□□□□ -1.12
COPS7B-221ENST00000488111 KRTAP10-4P60372 401 aaPredicted RBP8.05□□□□□ -1.12
COPS7B-221ENST00000488111 KRTAP17-1Q9BYP8 105 aa8.04□□□□□ -1.12
COPS7B-221ENST00000488111 ZNF706Q9Y5V0 76 aaPredicted RBP8.04□□□□□ -1.12
COPS7B-221ENST00000488111 A0A1B0GVX0 72 aa8.03□□□□□ -1.12
COPS7B-221ENST00000488111 LINC00313P59037 77 aa8.03□□□□□ -1.12
COPS7B-221ENST00000488111 FAM229AH3BQW9 127 aa8.02□□□□□ -1.13
COPS7B-221ENST00000488111 MRPL34Q9BQ48 92 aaKnown RBP8.02□□□□□ -1.13
COPS7B-221ENST00000488111 LINC00483Q53H64 154 aa8.02□□□□□ -1.13
COPS7B-221ENST00000488111 IGLV9-49A0A0B4J1Y8 123 aa8.01□□□□□ -1.13
COPS7B-221ENST00000488111 Q5VSD8 79 aa8□□□□□ -1.13
COPS7B-221ENST00000488111 IGHV6-1A0A0B4J1U7 121 aa8□□□□□ -1.13
COPS7B-221ENST00000488111 SPINK6Q6UWN8 80 aa8□□□□□ -1.13
COPS7B-221ENST00000488111 PLA2G1BP04054 148 aaKnown RBP7.99□□□□□ -1.13
COPS7B-221ENST00000488111 KRTAP1-4P0C5Y4 121 aa7.97□□□□□ -1.13
COPS7B-221ENST00000488111 PRAC1Q96KF2 57 aa7.97□□□□□ -1.13
COPS7B-221ENST00000488111 A0A087X002 238 aa7.96□□□□□ -1.13
COPS7B-221ENST00000488111 KRTAP13-3Q3SY46 172 aa7.95□□□□□ -1.14
COPS7B-221ENST00000488111 NOTCH2NLQ7Z3S9 236 aa7.94□□□□□ -1.14
COPS7B-221ENST00000488111 ACYP2P14621 99 aa7.93□□□□□ -1.14
COPS7B-221ENST00000488111 Q8N1X5 172 aa7.93□□□□□ -1.14
COPS7B-221ENST00000488111 KRTAP13-2Q52LG2 175 aa7.92□□□□□ -1.14
COPS7B-221ENST00000488111 Q5W150 140 aa7.91□□□□□ -1.14
COPS7B-221ENST00000488111 BIRC6Q9NR09 4857 aa7.91□□□□□ -1.14
COPS7B-221ENST00000488111 ADM2Q7Z4H4 148 aa7.91□□□□□ -1.14
COPS7B-221ENST00000488111 SPATA8Q6RVD6 105 aa7.89□□□□□ -1.15
COPS7B-221ENST00000488111 DMAC1Q96GE9 116 aa7.88□□□□□ -1.15
COPS7B-221ENST00000488111 PKHD1L1Q86WI1 4243 aa7.88□□□□□ -1.15
COPS7B-221ENST00000488111 LINC01554Q52M75 96 aa7.88□□□□□ -1.15
COPS7B-221ENST00000488111 KRTAP4-5Q9BYR2 181 aa7.86□□□□□ -1.15
COPS7B-221ENST00000488111 TYMSOSQ8TAI1 123 aa7.85□□□□□ -1.15
COPS7B-221ENST00000488111 SSBP3-AS1Q7Z2R9 100 aa7.84□□□□□ -1.15
COPS7B-221ENST00000488111 A0A1B0GU69 56 aa7.84□□□□□ -1.15
COPS7B-221ENST00000488111 LRP1Q07954 4544 aaKnown RBP7.83□□□□□ -1.16
COPS7B-221ENST00000488111 FLG2Q5D862 2391 aaPredicted RBP7.79□□□□□ -1.16
COPS7B-221ENST00000488111 MIR22HGQ0VDD5 57 aa7.79□□□□□ -1.16
COPS7B-221ENST00000488111 HERC2O95714 4834 aa7.78□□□□□ -1.16
COPS7B-221ENST00000488111 MYCBP2O75592 4640 aa7.77□□□□□ -1.17
COPS7B-221ENST00000488111 UQCR11O14957 56 aa7.77□□□□□ -1.17
COPS7B-221ENST00000488111 FAT3Q8TDW7 4589 aa7.76□□□□□ -1.17
COPS7B-221ENST00000488111 LINC00304Q8N9R0 145 aa7.74□□□□□ -1.17
COPS7B-221ENST00000488111 ABCA13Q86UQ4 5058 aa7.73□□□□□ -1.17
COPS7B-221ENST00000488111 TNXBP22105 4242 aa7.73□□□□□ -1.17
COPS7B-221ENST00000488111 IGKV2-30P06310 120 aa7.72□□□□□ -1.17
COPS7B-221ENST00000488111 KRTAP10-8P60410 259 aa7.71□□□□□ -1.17
COPS7B-221ENST00000488111 SPINK1P00995 79 aa7.69□□□□□ -1.18
COPS7B-221ENST00000488111 CSAG1Q6PB30 78 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms