RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 UBR5O95071 2799 aaPredicted RBP0.26□□□□□ -2.37
HMGB1P36-201ENST00000487709 SPART-AS1P0CW21 52 aa0.26□□□□□ -2.37
HMGB1P36-201ENST00000487709 LINC01590Q5TEZ4 76 aa0.26□□□□□ -2.37
HMGB1P36-201ENST00000487709 LEAP2Q969E1 77 aa0.26□□□□□ -2.37
HMGB1P36-201ENST00000487709 TTTY10Q9BZA0 68 aa0.26□□□□□ -2.37
HMGB1P36-201ENST00000487709 CREBBPQ92793 2442 aa0.26□□□□□ -2.37
HMGB1P36-201ENST00000487709 TNXBP22105 4242 aa0.26□□□□□ -2.37
HMGB1P36-201ENST00000487709 NSD1Q96L73 2696 aaPredicted RBP0.25□□□□□ -2.37
HMGB1P36-201ENST00000487709 EP300Q09472 2414 aaPredicted RBP0.25□□□□□ -2.37
HMGB1P36-201ENST00000487709 PDE4DIPQ5VU43 2346 aa0.25□□□□□ -2.37
HMGB1P36-201ENST00000487709 PRCDQ00LT1 54 aa0.25□□□□□ -2.37
HMGB1P36-201ENST00000487709 CLPSL2Q6UWE3 100 aa0.25□□□□□ -2.37
HMGB1P36-201ENST00000487709 NCOR1O75376 2440 aa0.25□□□□□ -2.37
HMGB1P36-201ENST00000487709 CHD8Q9HCK8 2581 aa0.24□□□□□ -2.37
HMGB1P36-201ENST00000487709 KNL1Q8NG31 2342 aa0.24□□□□□ -2.37
HMGB1P36-201ENST00000487709 RHPN1-AS1Q9BWJ2 59 aa0.24□□□□□ -2.37
HMGB1P36-201ENST00000487709 HRNRQ86YZ3 2850 aaPredicted RBP0.24□□□□□ -2.37
HMGB1P36-201ENST00000487709 DSPP15924 2871 aaKnown RBP0.23□□□□□ -2.37
HMGB1P36-201ENST00000487709 CSPG4Q6UVK1 2322 aa0.22□□□□□ -2.37
HMGB1P36-201ENST00000487709 PCNX1Q96RV3 2341 aa0.22□□□□□ -2.37
HMGB1P36-201ENST00000487709 H3BSH0 61 aa0.22□□□□□ -2.37
HMGB1P36-201ENST00000487709 SPRR2BP35325 72 aa0.22□□□□□ -2.37
HMGB1P36-201ENST00000487709 CEP290O15078 2479 aa0.22□□□□□ -2.37
HMGB1P36-201ENST00000487709 CELSR1Q9NYQ6 3014 aa0.21□□□□□ -2.38
HMGB1P36-201ENST00000487709 FLNBO75369 2602 aaKnown RBP0.21□□□□□ -2.38
HMGB1P36-201ENST00000487709 H3BUX3 64 aa0.21□□□□□ -2.38
HMGB1P36-201ENST00000487709 TMEM167AQ8TBQ9 72 aa0.21□□□□□ -2.38
HMGB1P36-201ENST00000487709 DEFB104AQ8WTQ1 72 aa0.21□□□□□ -2.38
HMGB1P36-201ENST00000487709 PKD1L2Q7Z442 2459 aa0.21□□□□□ -2.38
HMGB1P36-201ENST00000487709 PRRC2CQ9Y520 2896 aaKnown RBP0.2□□□□□ -2.38
HMGB1P36-201ENST00000487709 ALMS1Q8TCU4 4167 aa0.2□□□□□ -2.38
HMGB1P36-201ENST00000487709 K7EIM0 57 aa0.2□□□□□ -2.38
HMGB1P36-201ENST00000487709 HTN1P15515 57 aa0.2□□□□□ -2.38
HMGB1P36-201ENST00000487709 SPRR2AP35326 72 aa0.2□□□□□ -2.38
HMGB1P36-201ENST00000487709 FLNAP21333 2647 aaKnown RBP0.2□□□□□ -2.38
HMGB1P36-201ENST00000487709 MAP1BP46821 2468 aaKnown RBP0.2□□□□□ -2.38
HMGB1P36-201ENST00000487709 WNK1Q9H4A3 2382 aa0.19□□□□□ -2.38
HMGB1P36-201ENST00000487709 COL7A1Q02388 2944 aa0.19□□□□□ -2.38
HMGB1P36-201ENST00000487709 SPTBN4Q9H254 2564 aa0.19□□□□□ -2.38
HMGB1P36-201ENST00000487709 NBASA2RRP1 2371 aa0.19□□□□□ -2.38
HMGB1P36-201ENST00000487709 GPR98Q8WXG9 6306 aa0.19□□□□□ -2.38
HMGB1P36-201ENST00000487709 APC2O95996 2303 aa0.19□□□□□ -2.38
HMGB1P36-201ENST00000487709 MTORP42345 2549 aa0.18□□□□□ -2.38
HMGB1P36-201ENST00000487709 DEFB1P60022 68 aa0.18□□□□□ -2.38
HMGB1P36-201ENST00000487709 DEFB136Q30KP8 78 aa0.18□□□□□ -2.38
HMGB1P36-201ENST00000487709 ACANP16112 2415 aa0.18□□□□□ -2.38
HMGB1P36-201ENST00000487709 A0A096LNI7 61 aa0.17□□□□□ -2.38
HMGB1P36-201ENST00000487709 CD52P31358 61 aa0.17□□□□□ -2.38
HMGB1P36-201ENST00000487709 ACACAQ13085 2346 aa0.17□□□□□ -2.38
HMGB1P36-201ENST00000487709 DEFB133Q30KQ1 61 aa0.17□□□□□ -2.38
HMGB1P36-201ENST00000487709 RPL39P5Q59GN2 51 aa0.17□□□□□ -2.38
HMGB1P36-201ENST00000487709 DEFB124Q8NES8 71 aa0.17□□□□□ -2.38
HMGB1P36-201ENST00000487709 LRP1Q07954 4544 aaKnown RBP0.17□□□□□ -2.38
HMGB1P36-201ENST00000487709 DCHS2Q6V1P9 2916 aa0.16□□□□□ -2.38
HMGB1P36-201ENST00000487709 DEFB108AA8MXU0 73 aa0.16□□□□□ -2.38
HMGB1P36-201ENST00000487709 SPRR2EP22531 72 aa0.16□□□□□ -2.38
HMGB1P36-201ENST00000487709 KRTAP8-1Q8IUC2 63 aa0.16□□□□□ -2.38
HMGB1P36-201ENST00000487709 TNRC18O15417 2968 aaPredicted RBP0.15□□□□□ -2.38
HMGB1P36-201ENST00000487709 MAP1AP78559 2803 aaPredicted RBP0.15□□□□□ -2.38
HMGB1P36-201ENST00000487709 MT1AP04731 61 aa0.15□□□□□ -2.39
HMGB1P36-201ENST00000487709 KRTAP6-2Q3LI66 62 aa0.15□□□□□ -2.39
HMGB1P36-201ENST00000487709 SPRR2FQ96RM1 72 aa0.15□□□□□ -2.39
HMGB1P36-201ENST00000487709 RANBP2P49792 3224 aaKnown RBP0.15□□□□□ -2.39
HMGB1P36-201ENST00000487709 FAM186AA6NE01 2351 aa0.14□□□□□ -2.39
HMGB1P36-201ENST00000487709 NF1P21359 2839 aa0.14□□□□□ -2.39
HMGB1P36-201ENST00000487709 TENM2Q9NT68 2774 aa0.14□□□□□ -2.39
HMGB1P36-201ENST00000487709 ANKHD1Q8IWZ3 2542 aaKnown RBP0.14□□□□□ -2.39
HMGB1P36-201ENST00000487709 APELAP0DMC3 54 aa0.14□□□□□ -2.39
HMGB1P36-201ENST00000487709 RPS29P62273 56 aaKnown RBP0.14□□□□□ -2.39
HMGB1P36-201ENST00000487709 Q9Y3F1 56 aa0.14□□□□□ -2.39
HMGB1P36-201ENST00000487709 ACACBO00763 2458 aa0.14□□□□□ -2.39
HMGB1P36-201ENST00000487709 CCDC168Q8NDH2 2452 aa0.14□□□□□ -2.39
HMGB1P36-201ENST00000487709 ANKRD11Q6UB99 2663 aaPredicted RBP0.14□□□□□ -2.39
HMGB1P36-201ENST00000487709 HUWE1Q7Z6Z7 4374 aaKnown RBP0.14□□□□□ -2.39
HMGB1P36-201ENST00000487709 SONP18583 2426 aaKnown RBP0.14□□□□□ -2.39
HMGB1P36-201ENST00000487709 SETD2Q9BYW2 2564 aaPredicted RBP0.13□□□□□ -2.39
HMGB1P36-201ENST00000487709 GCN1Q92616 2671 aaKnown RBP0.13□□□□□ -2.39
HMGB1P36-201ENST00000487709 A0A0C4DFX4 3053 aa0.13□□□□□ -2.39
HMGB1P36-201ENST00000487709 TRIOO75962 3097 aa0.13□□□□□ -2.39
HMGB1P36-201ENST00000487709 MYCBP2O75592 4640 aa0.13□□□□□ -2.39
HMGB1P36-201ENST00000487709 SPG11Q96JI7 2443 aa0.13□□□□□ -2.39
HMGB1P36-201ENST00000487709 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
HMGB1P36-201ENST00000487709 FAT2Q9NYQ8 4349 aa0.13□□□□□ -2.39
HMGB1P36-201ENST00000487709 ANK3Q12955 4377 aaKnown RBP0.13□□□□□ -2.39
HMGB1P36-201ENST00000487709 COL6A5A8TX70 2615 aa0.13□□□□□ -2.39
HMGB1P36-201ENST00000487709 STAB1Q9NY15 2570 aa0.12□□□□□ -2.39
HMGB1P36-201ENST00000487709 LRRK2Q5S007 2527 aa0.12□□□□□ -2.39
HMGB1P36-201ENST00000487709 LPAP08519 4548 aa0.12□□□□□ -2.39
HMGB1P36-201ENST00000487709 KMT2AQ03164 3969 aa0.12□□□□□ -2.39
HMGB1P36-201ENST00000487709 RIF1Q5UIP0 2472 aaKnown RBP0.12□□□□□ -2.39
HMGB1P36-201ENST00000487709 TGP01266 2768 aa0.11□□□□□ -2.39
HMGB1P36-201ENST00000487709 EPG5Q9HCE0 2579 aa0.11□□□□□ -2.39
HMGB1P36-201ENST00000487709 HSPG2P98160 4391 aa0.11□□□□□ -2.39
HMGB1P36-201ENST00000487709 COL6A3P12111 3177 aa0.11□□□□□ -2.39
HMGB1P36-201ENST00000487709 MGAM2Q2M2H8 2515 aa0.11□□□□□ -2.39
HMGB1P36-201ENST00000487709 TLN2Q9Y4G6 2542 aa0.11□□□□□ -2.39
HMGB1P36-201ENST00000487709 DEFB4AO15263 64 aa0.11□□□□□ -2.39
HMGB1P36-201ENST00000487709 SMR3BP02814 79 aaPredicted RBP0.11□□□□□ -2.39
HMGB1P36-201ENST00000487709 LINC01556Q5JQF7 62 aa0.11□□□□□ -2.39
HMGB1P36-201ENST00000487709 TEP1Q99973 2627 aaKnown RBP0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms