RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 LIMD2Q9BT23 127 aa11.89□□□□□ -0.51
PHF1-209ENST00000487667 C4orf48Q5BLP8 95 aa11.88□□□□□ -0.51
PHF1-209ENST00000487667 FAM229AH3BQW9 127 aa11.88□□□□□ -0.51
PHF1-209ENST00000487667 KRTAP10-4P60372 401 aaPredicted RBP11.87□□□□□ -0.51
PHF1-209ENST00000487667 C5orf47Q569G3 176 aa11.86□□□□□ -0.51
PHF1-209ENST00000487667 SPINK1P00995 79 aa11.83□□□□□ -0.52
PHF1-209ENST00000487667 SPAG11AQ6PDA7 123 aa11.83□□□□□ -0.52
PHF1-209ENST00000487667 CASC2Q6XLA1 102 aa11.82□□□□□ -0.52
PHF1-209ENST00000487667 A0A1B0GVX0 72 aa11.82□□□□□ -0.52
PHF1-209ENST00000487667 KRTAP29-1A8MX34 341 aaPredicted RBP11.8□□□□□ -0.52
PHF1-209ENST00000487667 RPS29P62273 56 aaKnown RBP11.8□□□□□ -0.52
PHF1-209ENST00000487667 WFDC13Q8IUB5 93 aa11.8□□□□□ -0.52
PHF1-209ENST00000487667 ZCCHC13Q8WW36 166 aaKnown RBP11.8□□□□□ -0.52
PHF1-209ENST00000487667 FAT1Q14517 4588 aa11.78□□□□□ -0.52
PHF1-209ENST00000487667 MMP24-AS1A0A0U1RRL7 71 aa11.77□□□□□ -0.53
PHF1-209ENST00000487667 PRR26Q8N8Z3 221 aa11.76□□□□□ -0.53
PHF1-209ENST00000487667 hDV103S1A0JD37 113 aa11.76□□□□□ -0.53
PHF1-209ENST00000487667 C8orf17Q9NRJ1 99 aa11.76□□□□□ -0.53
PHF1-209ENST00000487667 LINC00304Q8N9R0 145 aa11.75□□□□□ -0.53
PHF1-209ENST00000487667 HSPG2P98160 4391 aa11.75□□□□□ -0.53
PHF1-209ENST00000487667 SMIM26A0A096LP01 95 aa11.74□□□□□ -0.53
PHF1-209ENST00000487667 RYR1P21817 5038 aa11.74□□□□□ -0.53
PHF1-209ENST00000487667 IGHV6-1A0A0B4J1U7 121 aa11.74□□□□□ -0.53
PHF1-209ENST00000487667 BIRC6Q9NR09 4857 aa11.73□□□□□ -0.53
PHF1-209ENST00000487667 C8orf87E5RJ46 101 aa11.72□□□□□ -0.53
PHF1-209ENST00000487667 C1orf195Q5TG92 126 aa11.72□□□□□ -0.53
PHF1-209ENST00000487667 Q5VSD8 79 aa11.7□□□□□ -0.54
PHF1-209ENST00000487667 H3BPC8 53 aa11.7□□□□□ -0.54
PHF1-209ENST00000487667 MP68P56378 58 aa11.7□□□□□ -0.54
PHF1-209ENST00000487667 KIAA1109Q2LD37 5005 aa11.69□□□□□ -0.54
PHF1-209ENST00000487667 TP53AIP1Q9HCN2 124 aa11.68□□□□□ -0.54
PHF1-209ENST00000487667 KRTAP17-1Q9BYP8 105 aa11.66□□□□□ -0.54
PHF1-209ENST00000487667 MRPL34Q9BQ48 92 aaKnown RBP11.64□□□□□ -0.55
PHF1-209ENST00000487667 C4orf26Q17RF5 130 aa11.62□□□□□ -0.55
PHF1-209ENST00000487667 Q8N1X5 172 aa11.62□□□□□ -0.55
PHF1-209ENST00000487667 CYP4F30PQ9H0H9 118 aa11.6□□□□□ -0.55
PHF1-209ENST00000487667 LINC00313P59037 77 aa11.6□□□□□ -0.55
PHF1-209ENST00000487667 FP248Q71RG6 208 aaPredicted RBP11.6□□□□□ -0.55
PHF1-209ENST00000487667 TRAV22A0A0B4J277 110 aa11.58□□□□□ -0.55
PHF1-209ENST00000487667 H0Y9P7 68 aa11.57□□□□□ -0.56
PHF1-209ENST00000487667 LINC00208Q96KT6 92 aa11.55□□□□□ -0.56
PHF1-209ENST00000487667 NOTCH2NLQ7Z3S9 236 aa11.54□□□□□ -0.56
PHF1-209ENST00000487667 NDUFS5O43920 106 aa11.54□□□□□ -0.56
PHF1-209ENST00000487667 PKHD1L1Q86WI1 4243 aa11.53□□□□□ -0.56
PHF1-209ENST00000487667 SPANXA2-OT1Q8N9U9 137 aa11.53□□□□□ -0.56
PHF1-209ENST00000487667 C1orf64Q8NEQ6 169 aa11.49□□□□□ -0.57
PHF1-209ENST00000487667 KRTAP10-8P60410 259 aa11.48□□□□□ -0.57
PHF1-209ENST00000487667 Q8N9P0 234 aaPredicted RBP11.45□□□□□ -0.58
PHF1-209ENST00000487667 KRTAP4-5Q9BYR2 181 aa11.43□□□□□ -0.58
PHF1-209ENST00000487667 KRTAP16-1A8MUX0 517 aa11.39□□□□□ -0.59
PHF1-209ENST00000487667 HERC2O95714 4834 aa11.38□□□□□ -0.59
PHF1-209ENST00000487667 Q1T7F1 81 aa11.37□□□□□ -0.59
PHF1-209ENST00000487667 MPLKIPQ8TAP9 179 aa11.35□□□□□ -0.59
PHF1-209ENST00000487667 PRR4Q16378 134 aa11.34□□□□□ -0.59
PHF1-209ENST00000487667 IGLV7-46A0A075B6I9 117 aa11.33□□□□□ -0.6
PHF1-209ENST00000487667 LOC101927531A0A1B0GV80 90 aa11.33□□□□□ -0.6
PHF1-209ENST00000487667 LRP1Q07954 4544 aaKnown RBP11.32□□□□□ -0.6
PHF1-209ENST00000487667 FLG2Q5D862 2391 aaPredicted RBP11.31□□□□□ -0.6
PHF1-209ENST00000487667 KRTAP13-3Q3SY46 172 aa11.29□□□□□ -0.6
PHF1-209ENST00000487667 V9GYY9 64 aa11.29□□□□□ -0.6
PHF1-209ENST00000487667 Q5W150 140 aa11.27□□□□□ -0.6
PHF1-209ENST00000487667 FAT3Q8TDW7 4589 aa11.27□□□□□ -0.61
PHF1-209ENST00000487667 PRO0628Q9UI54 55 aa11.27□□□□□ -0.61
PHF1-209ENST00000487667 RETNLBQ9BQ08 111 aa11.24□□□□□ -0.61
PHF1-209ENST00000487667 TNXBP22105 4242 aa11.22□□□□□ -0.61
PHF1-209ENST00000487667 MYCBP2O75592 4640 aa11.21□□□□□ -0.61
PHF1-209ENST00000487667 MT1HL1P0DM35 61 aa11.21□□□□□ -0.61
PHF1-209ENST00000487667 C20orf166-AS1Q96NR2 134 aa11.2□□□□□ -0.62
PHF1-209ENST00000487667 ABCA13Q86UQ4 5058 aa11.19□□□□□ -0.62
PHF1-209ENST00000487667 PCOTHQ58A44 107 aa11.19□□□□□ -0.62
PHF1-209ENST00000487667 A8MUU9 505 aa11.18□□□□□ -0.62
PHF1-209ENST00000487667 C9orf92A6NGG3 77 aa11.17□□□□□ -0.62
PHF1-209ENST00000487667 PCLOQ9Y6V0 5065 aa11.17□□□□□ -0.62
PHF1-209ENST00000487667 COA5Q86WW8 74 aa11.15□□□□□ -0.62
PHF1-209ENST00000487667 IGKV2-30P06310 120 aa11.15□□□□□ -0.62
PHF1-209ENST00000487667 BRK1Q8WUW1 75 aa11.11□□□□□ -0.63
PHF1-209ENST00000487667 Q75L30 129 aa11.1□□□□□ -0.63
PHF1-209ENST00000487667 DMBT1Q9UGM3 2413 aaPredicted RBP11.07□□□□□ -0.64
PHF1-209ENST00000487667 J3QL48 77 aa11.05□□□□□ -0.64
PHF1-209ENST00000487667 PSPHP1O15172 72 aa11.05□□□□□ -0.64
PHF1-209ENST00000487667 C7orf65Q6ZTY9 151 aa11.03□□□□□ -0.64
PHF1-209ENST00000487667 IGKV2D-30A0A075B6S6 120 aa11.02□□□□□ -0.65
PHF1-209ENST00000487667 A8MUN3 132 aa11.01□□□□□ -0.65
PHF1-209ENST00000487667 HRES1P13985 223 aa11□□□□□ -0.65
PHF1-209ENST00000487667 Q5VV11 94 aa10.99□□□□□ -0.65
PHF1-209ENST00000487667 LINC01558Q9Y6Z2 57 aa10.95□□□□□ -0.66
PHF1-209ENST00000487667 ATP11AUNQ6ZP68 121 aa10.94□□□□□ -0.66
PHF1-209ENST00000487667 ACYP2P14621 99 aa10.94□□□□□ -0.66
PHF1-209ENST00000487667 PRR15LQ9BU68 103 aa10.94□□□□□ -0.66
PHF1-209ENST00000487667 RPL37P61927 97 aaKnown RBP10.92□□□□□ -0.66
PHF1-209ENST00000487667 TPRXLQ17RH7 258 aa10.91□□□□□ -0.66
PHF1-209ENST00000487667 XP32Q5T750 250 aa10.91□□□□□ -0.66
PHF1-209ENST00000487667 DMAC1Q96GE9 116 aa10.91□□□□□ -0.66
PHF1-209ENST00000487667 CHKB-CPT1BH3BT56 60 aa10.87□□□□□ -0.67
PHF1-209ENST00000487667 SPINK7P58062 85 aa10.83□□□□□ -0.68
PHF1-209ENST00000487667 A6NED7 52 aa10.74□□□□□ -0.69
PHF1-209ENST00000487667 CDC42SE1Q9NRR8 79 aa10.68□□□□□ -0.7
PHF1-209ENST00000487667 LCA10Q71F78 164 aa10.66□□□□□ -0.7
PHF1-209ENST00000487667 COX6B2Q6YFQ2 88 aa10.62□□□□□ -0.71
PHF1-209ENST00000487667 HERC1Q15751 4861 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms