RNA–Protein interactions for RNA: ENST00000487621.5

SEMA3C-209, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-209ENST00000487621 SCGB1C2P0DMR2 95 aa12.36□□□□□ -0.43
SEMA3C-209ENST00000487621 FAM236DA0A1B0GTK5 79 aa12.35□□□□□ -0.43
SEMA3C-209ENST00000487621 MT2AP02795 61 aa12.35□□□□□ -0.43
SEMA3C-209ENST00000487621 FAM236CP0DP71 79 aa12.35□□□□□ -0.43
SEMA3C-209ENST00000487621 RBM12B-AS1Q9P1G2 102 aa12.34□□□□□ -0.43
SEMA3C-209ENST00000487621 DSCR8Q96T75 97 aa12.33□□□□□ -0.44
SEMA3C-209ENST00000487621 BAALC-AS2P0C853 105 aa12.3□□□□□ -0.44
SEMA3C-209ENST00000487621 C9JAW5 83 aa12.27□□□□□ -0.45
SEMA3C-209ENST00000487621 Q6ZQT0 140 aa12.27□□□□□ -0.45
SEMA3C-209ENST00000487621 J3KT08 172 aa12.26□□□□□ -0.45
SEMA3C-209ENST00000487621 MT1FP04733 61 aa12.26□□□□□ -0.45
SEMA3C-209ENST00000487621 C21orf62-AS1Q17RA5 79 aa12.25□□□□□ -0.45
SEMA3C-209ENST00000487621 ZCCHC13Q8WW36 166 aaKnown RBP12.24□□□□□ -0.45
SEMA3C-209ENST00000487621 Q8N9P0 234 aaPredicted RBP12.2□□□□□ -0.46
SEMA3C-209ENST00000487621 KRTAP9-3Q9BYQ3 159 aa12.18□□□□□ -0.46
SEMA3C-209ENST00000487621 LCE2BO14633 110 aa12.17□□□□□ -0.46
SEMA3C-209ENST00000487621 SPINK7P58062 85 aa12.17□□□□□ -0.46
SEMA3C-209ENST00000487621 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.15□□□□□ -0.46
SEMA3C-209ENST00000487621 ATXN8Q156A1 80 aa12.15□□□□□ -0.46
SEMA3C-209ENST00000487621 NAA38Q9BRA0 125 aaKnown RBP12.15□□□□□ -0.46
SEMA3C-209ENST00000487621 LOC110117498A0A087WWA1 95 aa12.14□□□□□ -0.47
SEMA3C-209ENST00000487621 JMJD7-PLA2G4BH0Y9G9 81 aa12.14□□□□□ -0.47
SEMA3C-209ENST00000487621 A0A1B0GW54 56 aa12.13□□□□□ -0.47
SEMA3C-209ENST00000487621 NDUFB1O75438 58 aa12.13□□□□□ -0.47
SEMA3C-209ENST00000487621 A8MWP4 228 aa12.12□□□□□ -0.47
SEMA3C-209ENST00000487621 KRTAP10-10P60014 251 aa12.12□□□□□ -0.47
SEMA3C-209ENST00000487621 MTURNQ8N3F0 131 aa12.12□□□□□ -0.47
SEMA3C-209ENST00000487621 C8orf17Q9NRJ1 99 aa12.12□□□□□ -0.47
SEMA3C-209ENST00000487621 FCGBPQ9Y6R7 5405 aaPredicted RBP12.11□□□□□ -0.47
SEMA3C-209ENST00000487621 IGKV3D-7A0A0C4DH55 119 aa12.1□□□□□ -0.47
SEMA3C-209ENST00000487621 M0R143 59 aa12.1□□□□□ -0.47
SEMA3C-209ENST00000487621 PDE6GP18545 87 aa12.05□□□□□ -0.48
SEMA3C-209ENST00000487621 C14orf132Q9NPU4 83 aa12.04□□□□□ -0.48
SEMA3C-209ENST00000487621 KRTAP9-7A8MTY7 169 aa12.03□□□□□ -0.48
SEMA3C-209ENST00000487621 KRTAP19-1Q8IUB9 90 aa12.02□□□□□ -0.49
SEMA3C-209ENST00000487621 Q6ZVQ6 151 aa12.01□□□□□ -0.49
SEMA3C-209ENST00000487621 WFDC13Q8IUB5 93 aa11.99□□□□□ -0.49
SEMA3C-209ENST00000487621 PRR15Q8IV56 129 aa11.99□□□□□ -0.49
SEMA3C-209ENST00000487621 SMIM6P0DI80 62 aa11.97□□□□□ -0.49
SEMA3C-209ENST00000487621 LYRM7Q5U5X0 104 aa11.96□□□□□ -0.49
SEMA3C-209ENST00000487621 MMP24-AS1A0A0U1RRL7 71 aa11.94□□□□□ -0.5
SEMA3C-209ENST00000487621 NREPQ16612 68 aa11.94□□□□□ -0.5
SEMA3C-209ENST00000487621 TMEM254Q8TBM7 123 aa11.9□□□□□ -0.5
SEMA3C-209ENST00000487621 MRPL34Q9BQ48 92 aaKnown RBP11.9□□□□□ -0.5
SEMA3C-209ENST00000487621 K7EQZ3 153 aa11.84□□□□□ -0.51
SEMA3C-209ENST00000487621 hDV103S1A0JD37 113 aa11.81□□□□□ -0.52
SEMA3C-209ENST00000487621 BATFQ16520 125 aa11.81□□□□□ -0.52
SEMA3C-209ENST00000487621 H3BT86 120 aa11.8□□□□□ -0.52
SEMA3C-209ENST00000487621 TSTD3H0UI37 97 aa11.78□□□□□ -0.52
SEMA3C-209ENST00000487621 C9orf118A6NHY6 69 aa11.77□□□□□ -0.53
SEMA3C-209ENST00000487621 KRTAP19-6Q3LI70 58 aa11.77□□□□□ -0.53
SEMA3C-209ENST00000487621 H1FX-AS1Q4G0G2 97 aa11.76□□□□□ -0.53
SEMA3C-209ENST00000487621 LOC105371267A0A1B0GV96 52 aa11.75□□□□□ -0.53
SEMA3C-209ENST00000487621 TAX1BP3O14907 124 aa11.74□□□□□ -0.53
SEMA3C-209ENST00000487621 NDUFS5O43920 106 aa11.73□□□□□ -0.53
SEMA3C-209ENST00000487621 A0A1W2PPM0 123 aa11.72□□□□□ -0.53
SEMA3C-209ENST00000487621 Q5W150 140 aa11.72□□□□□ -0.53
SEMA3C-209ENST00000487621 BPY2O14599 106 aa11.7□□□□□ -0.54
SEMA3C-209ENST00000487621 MACF1Q9UPN3 7388 aaKnown RBP11.69□□□□□ -0.54
SEMA3C-209ENST00000487621 IGKV2D-30A0A075B6S6 120 aa11.65□□□□□ -0.54
SEMA3C-209ENST00000487621 IGKV2-30P06310 120 aa11.65□□□□□ -0.54
SEMA3C-209ENST00000487621 C7orf65Q6ZTY9 151 aa11.64□□□□□ -0.55
SEMA3C-209ENST00000487621 LINC00846Q9NV44 126 aa11.64□□□□□ -0.55
SEMA3C-209ENST00000487621 Q8N9L7 120 aa11.63□□□□□ -0.55
SEMA3C-209ENST00000487621 SYNE2Q8WXH0 6885 aaKnown RBP11.59□□□□□ -0.55
SEMA3C-209ENST00000487621 CASC2Q6XLA1 102 aa11.59□□□□□ -0.55
SEMA3C-209ENST00000487621 HCG22E2RYF7 251 aa11.56□□□□□ -0.56
SEMA3C-209ENST00000487621 SMCPP49901 116 aaPredicted RBP11.56□□□□□ -0.56
SEMA3C-209ENST00000487621 SPCS1Q9Y6A9 102 aa11.53□□□□□ -0.56
SEMA3C-209ENST00000487621 C4orf26Q17RF5 130 aa11.5□□□□□ -0.57
SEMA3C-209ENST00000487621 CXCL6P80162 114 aa11.49□□□□□ -0.57
SEMA3C-209ENST00000487621 PRO0461Q9UI25 63 aa11.44□□□□□ -0.58
SEMA3C-209ENST00000487621 KRTAP3-1Q9BYR8 98 aa11.41□□□□□ -0.58
SEMA3C-209ENST00000487621 UBL5Q9BZL1 73 aa11.39□□□□□ -0.59
SEMA3C-209ENST00000487621 C5orf47Q569G3 176 aa11.34□□□□□ -0.59
SEMA3C-209ENST00000487621 K7EP34 96 aa11.31□□□□□ -0.6
SEMA3C-209ENST00000487621 COL5A1-AS1Q5SY13 56 aa11.31□□□□□ -0.6
SEMA3C-209ENST00000487621 KRTAP6-3Q3LI67 103 aa11.29□□□□□ -0.6
SEMA3C-209ENST00000487621 S4R3F8 94 aa11.27□□□□□ -0.61
SEMA3C-209ENST00000487621 C1orf64Q8NEQ6 169 aa11.26□□□□□ -0.61
SEMA3C-209ENST00000487621 LCA10Q71F78 164 aa11.23□□□□□ -0.61
SEMA3C-209ENST00000487621 MT1BP07438 61 aa11.22□□□□□ -0.61
SEMA3C-209ENST00000487621 FAM236AA0A1B0GUQ0 79 aa11.21□□□□□ -0.61
SEMA3C-209ENST00000487621 FAM236BA0A1B0GV22 79 aa11.21□□□□□ -0.61
SEMA3C-209ENST00000487621 CSAG1Q6PB30 78 aa11.2□□□□□ -0.62
SEMA3C-209ENST00000487621 TP53AIP1Q9HCN2 124 aa11.2□□□□□ -0.62
SEMA3C-209ENST00000487621 SPRR2GQ9BYE4 73 aa11.18□□□□□ -0.62
SEMA3C-209ENST00000487621 KRTAP19-8Q3LI54 63 aa11.16□□□□□ -0.62
SEMA3C-209ENST00000487621 Q5VV11 94 aa11.1□□□□□ -0.63
SEMA3C-209ENST00000487621 A6NN06 94 aa11.08□□□□□ -0.64
SEMA3C-209ENST00000487621 F8W1H4 67 aa11.08□□□□□ -0.64
SEMA3C-209ENST00000487621 PCP4L1A6NKN8 68 aa11.07□□□□□ -0.64
SEMA3C-209ENST00000487621 ETDBQ3ZM63 59 aa11.07□□□□□ -0.64
SEMA3C-209ENST00000487621 GTF2H5Q6ZYL4 71 aa11.07□□□□□ -0.64
SEMA3C-209ENST00000487621 CYP4F30PQ9H0H9 118 aa11.05□□□□□ -0.64
SEMA3C-209ENST00000487621 KLKP1Q107X0 134 aa11.04□□□□□ -0.64
SEMA3C-209ENST00000487621 A0A087WVE0 104 aa10.99□□□□□ -0.65
SEMA3C-209ENST00000487621 KRTAP10-5P60370 271 aa10.98□□□□□ -0.65
SEMA3C-209ENST00000487621 MUC12Q9UKN1 5478 aa10.94□□□□□ -0.66
SEMA3C-209ENST00000487621 TRAV22A0A0B4J277 110 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms