RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-215ENST00000487620 ZNF706Q9Y5V0 76 aaPredicted RBP5.85□□□□□ -1.47
ZNF3-215ENST00000487620 HECTD4Q9Y4D8 3996 aa5.85□□□□□ -1.47
ZNF3-215ENST00000487620 DNAH8Q96JB1 4490 aa5.85□□□□□ -1.47
ZNF3-215ENST00000487620 LOC101927531A0A1B0GV80 90 aa5.84□□□□□ -1.47
ZNF3-215ENST00000487620 SPINK6Q6UWN8 80 aa5.84□□□□□ -1.47
ZNF3-215ENST00000487620 LCA10Q71F78 164 aa5.83□□□□□ -1.48
ZNF3-215ENST00000487620 IGLV5-52A0A0A0MRZ9 124 aa5.83□□□□□ -1.48
ZNF3-215ENST00000487620 NUPR2A6NF83 97 aa5.82□□□□□ -1.48
ZNF3-215ENST00000487620 A0A087WTM6 91 aa5.82□□□□□ -1.48
ZNF3-215ENST00000487620 HRES1P13985 223 aa5.82□□□□□ -1.48
ZNF3-215ENST00000487620 STARD9Q9P2P6 4700 aa5.82□□□□□ -1.48
ZNF3-215ENST00000487620 RTL8CO15255 209 aa5.81□□□□□ -1.48
ZNF3-215ENST00000487620 ZNF861PO60384 105 aa5.81□□□□□ -1.48
ZNF3-215ENST00000487620 LINC01558Q9Y6Z2 57 aa5.8□□□□□ -1.48
ZNF3-215ENST00000487620 VPS13DQ5THJ4 4388 aa5.8□□□□□ -1.48
ZNF3-215ENST00000487620 KMT2AQ03164 3969 aa5.79□□□□□ -1.48
ZNF3-215ENST00000487620 ATP11AUNQ6ZP68 121 aa5.79□□□□□ -1.48
ZNF3-215ENST00000487620 Q5W150 140 aa5.78□□□□□ -1.48
ZNF3-215ENST00000487620 CIRBP-AS1Q8TBR5 109 aa5.78□□□□□ -1.48
ZNF3-215ENST00000487620 DNAH2Q9P225 4427 aa5.78□□□□□ -1.48
ZNF3-215ENST00000487620 TGP01266 2768 aa5.78□□□□□ -1.48
ZNF3-215ENST00000487620 DNAH17Q9UFH2 4485 aa5.78□□□□□ -1.48
ZNF3-215ENST00000487620 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
ZNF3-215ENST00000487620 MEGF8Q7Z7M0 2845 aa5.77□□□□□ -1.49
ZNF3-215ENST00000487620 PLAC8Q9NZF1 115 aa5.76□□□□□ -1.49
ZNF3-215ENST00000487620 SPINK7P58062 85 aa5.75□□□□□ -1.49
ZNF3-215ENST00000487620 PRR26Q8N8Z3 221 aa5.75□□□□□ -1.49
ZNF3-215ENST00000487620 PRKDCP78527 4128 aaKnown RBP5.74□□□□□ -1.49
ZNF3-215ENST00000487620 KTN1-AS1Q86SY8 53 aa5.74□□□□□ -1.49
ZNF3-215ENST00000487620 IGLV7-43P04211 117 aa5.72□□□□□ -1.49
ZNF3-215ENST00000487620 A6NN06 94 aa5.72□□□□□ -1.49
ZNF3-215ENST00000487620 KRTAP13-3Q3SY46 172 aa5.72□□□□□ -1.49
ZNF3-215ENST00000487620 RETNLBQ9BQ08 111 aa5.71□□□□□ -1.5
ZNF3-215ENST00000487620 ALMS1Q8TCU4 4167 aa5.7□□□□□ -1.5
ZNF3-215ENST00000487620 ACYP2P14621 99 aa5.7□□□□□ -1.5
ZNF3-215ENST00000487620 DNAH6Q9C0G6 4158 aa5.7□□□□□ -1.5
ZNF3-215ENST00000487620 C8orf87E5RJ46 101 aa5.67□□□□□ -1.5
ZNF3-215ENST00000487620 LINC00313P59037 77 aa5.67□□□□□ -1.5
ZNF3-215ENST00000487620 C1orf134Q5TEV5 83 aa5.67□□□□□ -1.5
ZNF3-215ENST00000487620 SSBP3-AS1Q7Z2R9 100 aa5.66□□□□□ -1.5
ZNF3-215ENST00000487620 RBM12B-AS1Q9P1G2 102 aa5.65□□□□□ -1.5
ZNF3-215ENST00000487620 DNAH11Q96DT5 4516 aa5.65□□□□□ -1.5
ZNF3-215ENST00000487620 FAM229AH3BQW9 127 aa5.64□□□□□ -1.51
ZNF3-215ENST00000487620 DMAC1Q96GE9 116 aa5.64□□□□□ -1.51
ZNF3-215ENST00000487620 C7orf65Q6ZTY9 151 aa5.63□□□□□ -1.51
ZNF3-215ENST00000487620 LY6G6CO95867 125 aa5.61□□□□□ -1.51
ZNF3-215ENST00000487620 DNAH5Q8TE73 4624 aa5.61□□□□□ -1.51
ZNF3-215ENST00000487620 A0A1B0GU69 56 aa5.61□□□□□ -1.51
ZNF3-215ENST00000487620 IGKV2-30P06310 120 aa5.61□□□□□ -1.51
ZNF3-215ENST00000487620 KRTAP13-2Q52LG2 175 aa5.61□□□□□ -1.51
ZNF3-215ENST00000487620 KRTAP10-2P60368 255 aa5.6□□□□□ -1.51
ZNF3-215ENST00000487620 IGKV2D-30A0A075B6S6 120 aa5.58□□□□□ -1.52
ZNF3-215ENST00000487620 LRP1BQ9NZR2 4599 aa5.56□□□□□ -1.52
ZNF3-215ENST00000487620 KRTAP16-1A8MUX0 517 aa5.56□□□□□ -1.52
ZNF3-215ENST00000487620 VPS13BQ7Z7G8 4022 aa5.52□□□□□ -1.53
ZNF3-215ENST00000487620 PRAC1Q96KF2 57 aa5.52□□□□□ -1.53
ZNF3-215ENST00000487620 PKD1P98161 4303 aa5.52□□□□□ -1.53
ZNF3-215ENST00000487620 KRTAP10-1P60331 282 aa5.51□□□□□ -1.53
ZNF3-215ENST00000487620 MIR22HGQ0VDD5 57 aa5.51□□□□□ -1.53
ZNF3-215ENST00000487620 UQCR11O14957 56 aa5.51□□□□□ -1.53
ZNF3-215ENST00000487620 SPATA8Q6RVD6 105 aa5.51□□□□□ -1.53
ZNF3-215ENST00000487620 KRTAP1-4P0C5Y4 121 aa5.5□□□□□ -1.53
ZNF3-215ENST00000487620 C4orf48Q5BLP8 95 aa5.5□□□□□ -1.53
ZNF3-215ENST00000487620 ADM2Q7Z4H4 148 aa5.5□□□□□ -1.53
ZNF3-215ENST00000487620 HYDINQ4G0P3 5121 aa5.49□□□□□ -1.53
ZNF3-215ENST00000487620 SPINK1P00995 79 aa5.49□□□□□ -1.53
ZNF3-215ENST00000487620 PLA2G1BP04054 148 aaKnown RBP5.48□□□□□ -1.53
ZNF3-215ENST00000487620 Q6ZSA8 131 aa5.48□□□□□ -1.53
ZNF3-215ENST00000487620 TYMSOSQ8TAI1 123 aa5.47□□□□□ -1.53
ZNF3-215ENST00000487620 FAT2Q9NYQ8 4349 aa5.46□□□□□ -1.54
ZNF3-215ENST00000487620 Q8N1X5 172 aa5.46□□□□□ -1.54
ZNF3-215ENST00000487620 PKHD1P08F94 4074 aa5.39□□□□□ -1.55
ZNF3-215ENST00000487620 LINC00304Q8N9R0 145 aa5.38□□□□□ -1.55
ZNF3-215ENST00000487620 C9orf92A6NGG3 77 aa5.36□□□□□ -1.55
ZNF3-215ENST00000487620 LINC01554Q52M75 96 aa5.35□□□□□ -1.55
ZNF3-215ENST00000487620 CSAG1Q6PB30 78 aa5.34□□□□□ -1.55
ZNF3-215ENST00000487620 SMR3BP02814 79 aaPredicted RBP5.31□□□□□ -1.56
ZNF3-215ENST00000487620 H0YAA0 97 aa5.3□□□□□ -1.56
ZNF3-215ENST00000487620 RPS29P62273 56 aaKnown RBP5.3□□□□□ -1.56
ZNF3-215ENST00000487620 KRTAP3-1Q9BYR8 98 aa5.28□□□□□ -1.56
ZNF3-215ENST00000487620 A8MUU9 505 aa5.27□□□□□ -1.57
ZNF3-215ENST00000487620 C20orf166-AS1Q96NR2 134 aa5.27□□□□□ -1.57
ZNF3-215ENST00000487620 A0A1B0GU33 70 aa5.26□□□□□ -1.57
ZNF3-215ENST00000487620 SACSQ9NZJ4 4579 aa5.26□□□□□ -1.57
ZNF3-215ENST00000487620 FAT1Q14517 4588 aa5.25□□□□□ -1.57
ZNF3-215ENST00000487620 H1FX-AS1Q4G0G2 97 aa5.23□□□□□ -1.57
ZNF3-215ENST00000487620 DYNC1H1Q14204 4646 aaKnown RBP5.23□□□□□ -1.57
ZNF3-215ENST00000487620 PKHD1L1Q86WI1 4243 aa5.22□□□□□ -1.57
ZNF3-215ENST00000487620 APOBP04114 4563 aaKnown RBP5.2□□□□□ -1.58
ZNF3-215ENST00000487620 KMT2CQ8NEZ4 4911 aaKnown RBP5.19□□□□□ -1.58
ZNF3-215ENST00000487620 FLG2Q5D862 2391 aaPredicted RBP5.18□□□□□ -1.58
ZNF3-215ENST00000487620 COX6B2Q6YFQ2 88 aa5.16□□□□□ -1.58
ZNF3-215ENST00000487620 KRTAP10-4P60372 401 aaPredicted RBP5.15□□□□□ -1.59
ZNF3-215ENST00000487620 KRTAP25-1Q3LHN0 102 aa5.15□□□□□ -1.59
ZNF3-215ENST00000487620 K7ERS5 55 aa5.13□□□□□ -1.59
ZNF3-215ENST00000487620 CRIPTQ9P021 101 aa5.12□□□□□ -1.59
ZNF3-215ENST00000487620 RYR3Q15413 4870 aa5.12□□□□□ -1.59
ZNF3-215ENST00000487620 DMBT1Q9UGM3 2413 aaPredicted RBP5.11□□□□□ -1.59
ZNF3-215ENST00000487620 A0A1B0GVY2 172 aa5.09□□□□□ -1.59
ZNF3-215ENST00000487620 HSPG2P98160 4391 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms