RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 CELSR1Q9NYQ6 3014 aa0.61□□□□□ -2.31
CUL3-211ENST00000487558 NDUFA1O15239 70 aa0.61□□□□□ -2.31
CUL3-211ENST00000487558 RYR1P21817 5038 aa0.61□□□□□ -2.31
CUL3-211ENST00000487558 A0A0C4DFX4 3053 aa0.61□□□□□ -2.31
CUL3-211ENST00000487558 FAT2Q9NYQ8 4349 aa0.6□□□□□ -2.31
CUL3-211ENST00000487558 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
CUL3-211ENST00000487558 PRM1P04553 51 aa0.6□□□□□ -2.31
CUL3-211ENST00000487558 HUWE1Q7Z6Z7 4374 aaKnown RBP0.6□□□□□ -2.31
CUL3-211ENST00000487558 SRRM2Q9UQ35 2752 aaKnown RBP0.6□□□□□ -2.31
CUL3-211ENST00000487558 HYDINQ4G0P3 5121 aa0.59□□□□□ -2.31
CUL3-211ENST00000487558 COL6A3P12111 3177 aa0.59□□□□□ -2.31
CUL3-211ENST00000487558 DEFB131AP59861 70 aa0.59□□□□□ -2.31
CUL3-211ENST00000487558 SYNE2Q8WXH0 6885 aaKnown RBP0.59□□□□□ -2.32
CUL3-211ENST00000487558 IGLV5-48A0A075B6I7 105 aa0.58□□□□□ -2.32
CUL3-211ENST00000487558 DNHD1Q96M86 4753 aa0.57□□□□□ -2.32
CUL3-211ENST00000487558 ABCA13Q86UQ4 5058 aa0.57□□□□□ -2.32
CUL3-211ENST00000487558 KMT2CQ8NEZ4 4911 aaKnown RBP0.57□□□□□ -2.32
CUL3-211ENST00000487558 NF1P21359 2839 aa0.57□□□□□ -2.32
CUL3-211ENST00000487558 FLNBO75369 2602 aaKnown RBP0.57□□□□□ -2.32
CUL3-211ENST00000487558 KMT2AQ03164 3969 aa0.56□□□□□ -2.32
CUL3-211ENST00000487558 ZZEF1O43149 2961 aa0.56□□□□□ -2.32
CUL3-211ENST00000487558 C9orf92A6NGG3 77 aa0.56□□□□□ -2.32
CUL3-211ENST00000487558 DCHS2Q6V1P9 2916 aa0.56□□□□□ -2.32
CUL3-211ENST00000487558 NEBP20929 6669 aa0.56□□□□□ -2.32
CUL3-211ENST00000487558 EPPK1P58107 5090 aaKnown RBP0.56□□□□□ -2.32
CUL3-211ENST00000487558 RYR3Q15413 4870 aa0.55□□□□□ -2.32
CUL3-211ENST00000487558 M0QY20 66 aa0.55□□□□□ -2.32
CUL3-211ENST00000487558 FSIP2Q5CZC0 6907 aa0.55□□□□□ -2.32
CUL3-211ENST00000487558 ACACAQ13085 2346 aa0.54□□□□□ -2.32
CUL3-211ENST00000487558 MMP24-AS1A0A0U1RRL7 71 aa0.54□□□□□ -2.32
CUL3-211ENST00000487558 MTORP42345 2549 aa0.54□□□□□ -2.32
CUL3-211ENST00000487558 LRRK2Q5S007 2527 aa0.54□□□□□ -2.32
CUL3-211ENST00000487558 ZFHX4Q86UP3 3567 aa0.53□□□□□ -2.32
CUL3-211ENST00000487558 MAST4O15021 2626 aa0.53□□□□□ -2.32
CUL3-211ENST00000487558 GCN1Q92616 2671 aaKnown RBP0.53□□□□□ -2.32
CUL3-211ENST00000487558 RYR2Q92736 4967 aa0.53□□□□□ -2.32
CUL3-211ENST00000487558 SPRR2DP22532 72 aa0.53□□□□□ -2.32
CUL3-211ENST00000487558 PCNTO95613 3336 aa0.53□□□□□ -2.32
CUL3-211ENST00000487558 LYSTQ99698 3801 aa0.53□□□□□ -2.33
CUL3-211ENST00000487558 MYCBP2O75592 4640 aa0.53□□□□□ -2.33
CUL3-211ENST00000487558 SPG11Q96JI7 2443 aa0.53□□□□□ -2.33
CUL3-211ENST00000487558 HERC1Q15751 4861 aa0.53□□□□□ -2.33
CUL3-211ENST00000487558 BIRC6Q9NR09 4857 aa0.53□□□□□ -2.33
CUL3-211ENST00000487558 SPTBN4Q9H254 2564 aa0.52□□□□□ -2.33
CUL3-211ENST00000487558 NSD1Q96L73 2696 aaPredicted RBP0.52□□□□□ -2.33
CUL3-211ENST00000487558 FLNCQ14315 2725 aa0.52□□□□□ -2.33
CUL3-211ENST00000487558 FAT4Q6V0I7 4981 aa0.52□□□□□ -2.33
CUL3-211ENST00000487558 LRP1Q07954 4544 aaKnown RBP0.52□□□□□ -2.33
CUL3-211ENST00000487558 GCC2Q8IWJ2 1684 aa0.52□□□□□ -2.33
CUL3-211ENST00000487558 HRNRQ86YZ3 2850 aaPredicted RBP0.51□□□□□ -2.33
CUL3-211ENST00000487558 KMT2DO14686 5537 aa0.51□□□□□ -2.33
CUL3-211ENST00000487558 FAM186AA6NE01 2351 aa0.51□□□□□ -2.33
CUL3-211ENST00000487558 A8MTW9 85 aa0.51□□□□□ -2.33
CUL3-211ENST00000487558 H3BNG1 76 aa0.51□□□□□ -2.33
CUL3-211ENST00000487558 CEP350Q5VT06 3117 aa0.51□□□□□ -2.33
CUL3-211ENST00000487558 PDZD2O15018 2839 aa0.51□□□□□ -2.33
CUL3-211ENST00000487558 STAB1Q9NY15 2570 aa0.51□□□□□ -2.33
CUL3-211ENST00000487558 SYNE1Q8NF91 8797 aaKnown RBP0.5□□□□□ -2.33
CUL3-211ENST00000487558 FLNAP21333 2647 aaKnown RBP0.5□□□□□ -2.33
CUL3-211ENST00000487558 SSPOA2VEC9 5147 aa0.5□□□□□ -2.33
CUL3-211ENST00000487558 SETD2Q9BYW2 2564 aaPredicted RBP0.5□□□□□ -2.33
CUL3-211ENST00000487558 MDN1Q9NU22 5596 aa0.49□□□□□ -2.33
CUL3-211ENST00000487558 MROH2BQ7Z745 1585 aa0.49□□□□□ -2.33
CUL3-211ENST00000487558 DUOX1Q9NRD9 1551 aa0.49□□□□□ -2.33
CUL3-211ENST00000487558 RIF1Q5UIP0 2472 aaKnown RBP0.49□□□□□ -2.33
CUL3-211ENST00000487558 DMBT1Q9UGM3 2413 aaPredicted RBP0.49□□□□□ -2.33
CUL3-211ENST00000487558 CELSR3Q9NYQ7 3312 aa0.49□□□□□ -2.33
CUL3-211ENST00000487558 COL6A5A8TX70 2615 aa0.48□□□□□ -2.33
CUL3-211ENST00000487558 MUC5ACP98088 5654 aa0.48□□□□□ -2.33
CUL3-211ENST00000487558 SPRR2BP35325 72 aa0.48□□□□□ -2.33
CUL3-211ENST00000487558 DSTQ03001 7570 aaKnown RBP0.47□□□□□ -2.33
CUL3-211ENST00000487558 HERC2O95714 4834 aa0.47□□□□□ -2.33
CUL3-211ENST00000487558 RNF213Q63HN8 5207 aa0.46□□□□□ -2.34
CUL3-211ENST00000487558 M0QZ58 72 aa0.46□□□□□ -2.34
CUL3-211ENST00000487558 SNRPGP62308 76 aaKnown RBP0.46□□□□□ -2.34
CUL3-211ENST00000487558 DMXL1Q9Y485 3027 aa0.46□□□□□ -2.34
CUL3-211ENST00000487558 COL7A1Q02388 2944 aa0.45□□□□□ -2.34
CUL3-211ENST00000487558 TEP1Q99973 2627 aaKnown RBP0.45□□□□□ -2.34
CUL3-211ENST00000487558 TNP1P09430 55 aa0.45□□□□□ -2.34
CUL3-211ENST00000487558 ANKHD1Q8IWZ3 2542 aaKnown RBP0.45□□□□□ -2.34
CUL3-211ENST00000487558 ANKRD11Q6UB99 2663 aaPredicted RBP0.45□□□□□ -2.34
CUL3-211ENST00000487558 VPS13BQ7Z7G8 4022 aa0.45□□□□□ -2.34
CUL3-211ENST00000487558 CSMD1Q96PZ7 3565 aa0.45□□□□□ -2.34
CUL3-211ENST00000487558 NBEAL2Q6ZNJ1 2754 aa0.45□□□□□ -2.34
CUL3-211ENST00000487558 EPG5Q9HCE0 2579 aa0.45□□□□□ -2.34
CUL3-211ENST00000487558 WDFY4Q6ZS81 3184 aa0.44□□□□□ -2.34
CUL3-211ENST00000487558 PKD1P98161 4303 aa0.44□□□□□ -2.34
CUL3-211ENST00000487558 HMCN2Q8NDA2 5059 aa0.44□□□□□ -2.34
CUL3-211ENST00000487558 LPAP08519 4548 aa0.44□□□□□ -2.34
CUL3-211ENST00000487558 TACC2O95359 2948 aa0.44□□□□□ -2.34
CUL3-211ENST00000487558 SZT2Q5T011 3432 aa0.43□□□□□ -2.34
CUL3-211ENST00000487558 MYO18BQ8IUG5 2567 aa0.43□□□□□ -2.34
CUL3-211ENST00000487558 USP9XQ93008 2570 aaPredicted RBP0.43□□□□□ -2.34
CUL3-211ENST00000487558 UTP20O75691 2785 aaKnown RBP0.43□□□□□ -2.34
CUL3-211ENST00000487558 SONP18583 2426 aaKnown RBP0.43□□□□□ -2.34
CUL3-211ENST00000487558 DEFB110Q30KQ9 67 aa0.42□□□□□ -2.34
CUL3-211ENST00000487558 ITPR3Q14573 2671 aa0.42□□□□□ -2.34
CUL3-211ENST00000487558 NBEAQ8NFP9 2946 aa0.41□□□□□ -2.34
CUL3-211ENST00000487558 MYO9AB2RTY4 2548 aa0.41□□□□□ -2.34
CUL3-211ENST00000487558 VCANP13611 3396 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms