RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 A0A1B0GW15 77 aa1.66□□□□□ -2.14
CNN3-206ENST00000487539 S100A8P05109 93 aa1.66□□□□□ -2.14
CNN3-206ENST00000487539 COX7BP24311 80 aa1.66□□□□□ -2.14
CNN3-206ENST00000487539 LINC00313P59037 77 aa1.66□□□□□ -2.14
CNN3-206ENST00000487539 ELOF1P60002 83 aaKnown RBP1.66□□□□□ -2.14
CNN3-206ENST00000487539 TMEM170BQ5T4T1 132 aa1.66□□□□□ -2.14
CNN3-206ENST00000487539 FA2HQ7L5A8 372 aa1.66□□□□□ -2.14
CNN3-206ENST00000487539 PMCHL2Q9BQD1 86 aa1.66□□□□□ -2.14
CNN3-206ENST00000487539 SMCO4Q9NRQ5 59 aa1.66□□□□□ -2.14
CNN3-206ENST00000487539 HINT1P49773 126 aaPredicted RBP1.65□□□□□ -2.15
CNN3-206ENST00000487539 BAGE3Q86Y29 109 aa1.65□□□□□ -2.15
CNN3-206ENST00000487539 MAP1LC3CQ9BXW4 147 aa1.65□□□□□ -2.15
CNN3-206ENST00000487539 NXT2Q9NPJ8 142 aaKnown RBP1.65□□□□□ -2.15
CNN3-206ENST00000487539 HIST1H2BKO60814 126 aa1.64□□□□□ -2.15
CNN3-206ENST00000487539 HBDP02042 147 aa1.64□□□□□ -2.15
CNN3-206ENST00000487539 HIST1H2BJP06899 126 aa1.64□□□□□ -2.15
CNN3-206ENST00000487539 LINC00614P0C842 121 aa1.64□□□□□ -2.15
CNN3-206ENST00000487539 FABP4P15090 132 aa1.64□□□□□ -2.15
CNN3-206ENST00000487539 HIST1H2BOP23527 126 aa1.64□□□□□ -2.15
CNN3-206ENST00000487539 HIST1H2BBP33778 126 aa1.64□□□□□ -2.15
CNN3-206ENST00000487539 HIST1H2BDP58876 126 aa1.64□□□□□ -2.15
CNN3-206ENST00000487539 TSPEAR-AS2P59090 65 aa1.64□□□□□ -2.15
CNN3-206ENST00000487539 KRTAP12-4P60329 112 aa1.64□□□□□ -2.15
CNN3-206ENST00000487539 HIST1H2BCP62807 126 aa1.64□□□□□ -2.15
CNN3-206ENST00000487539 HIST2H2BEQ16778 126 aa1.64□□□□□ -2.15
CNN3-206ENST00000487539 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.64□□□□□ -2.15
CNN3-206ENST00000487539 HIST1H2BHQ93079 126 aa1.64□□□□□ -2.15
CNN3-206ENST00000487539 HIST1H2BNQ99877 126 aa1.64□□□□□ -2.15
CNN3-206ENST00000487539 HIST1H2BMQ99879 126 aa1.64□□□□□ -2.15
CNN3-206ENST00000487539 LAMTOR2Q9Y2Q5 125 aa1.64□□□□□ -2.15
CNN3-206ENST00000487539 LINC01546A6NGU7 62 aa1.63□□□□□ -2.15
CNN3-206ENST00000487539 K7EMI3 77 aa1.63□□□□□ -2.15
CNN3-206ENST00000487539 HSBP1O75506 76 aa1.63□□□□□ -2.15
CNN3-206ENST00000487539 NDUFC2O95298 119 aa1.63□□□□□ -2.15
CNN3-206ENST00000487539 KRTAP12-3P60328 96 aa1.63□□□□□ -2.15
CNN3-206ENST00000487539 KLKP1Q107X0 134 aa1.63□□□□□ -2.15
CNN3-206ENST00000487539 KRTAP20-2Q3LI61 65 aa1.63□□□□□ -2.15
CNN3-206ENST00000487539 SPINT4Q6UDR6 99 aa1.63□□□□□ -2.15
CNN3-206ENST00000487539 SFTA2Q6UW10 78 aa1.63□□□□□ -2.15
CNN3-206ENST00000487539 ATOH7Q8N100 152 aa1.63□□□□□ -2.15
CNN3-206ENST00000487539 OR13C6PQ8NH95 151 aa1.63□□□□□ -2.15
CNN3-206ENST00000487539 IFI27L1Q96BM0 104 aa1.63□□□□□ -2.15
CNN3-206ENST00000487539 PRO2289Q9P1D8 64 aa1.63□□□□□ -2.15
CNN3-206ENST00000487539 SEC61GP60059 68 aa1.62□□□□□ -2.15
CNN3-206ENST00000487539 CLEC2BQ92478 149 aa1.62□□□□□ -2.15
CNN3-206ENST00000487539 TTTY13Q9BZ97 58 aa1.62□□□□□ -2.15
CNN3-206ENST00000487539 H3BUT2 72 aa1.61□□□□□ -2.15
CNN3-206ENST00000487539 LEPROTL1O95214 131 aa1.61□□□□□ -2.15
CNN3-206ENST00000487539 S100A1P23297 94 aa1.61□□□□□ -2.15
CNN3-206ENST00000487539 KRTDAPP60985 99 aa1.61□□□□□ -2.15
CNN3-206ENST00000487539 OCIAD2Q56VL3 154 aa1.61□□□□□ -2.15
CNN3-206ENST00000487539 KRTAP19-3Q7Z4W3 81 aa1.61□□□□□ -2.15
CNN3-206ENST00000487539 CHCHD1Q96BP2 118 aaKnown RBP1.61□□□□□ -2.15
CNN3-206ENST00000487539 CYSTM1Q9H1C7 97 aa1.61□□□□□ -2.15
CNN3-206ENST00000487539 CBY1Q9Y3M2 126 aa1.61□□□□□ -2.15
CNN3-206ENST00000487539 C3orf79P0CE67 100 aa1.6□□□□□ -2.15
CNN3-206ENST00000487539 G0S2P27469 103 aa1.6□□□□□ -2.15
CNN3-206ENST00000487539 Q6JHZ5 121 aa1.6□□□□□ -2.15
CNN3-206ENST00000487539 LCA10Q71F78 164 aa1.6□□□□□ -2.15
CNN3-206ENST00000487539 HIST3H2BBQ8N257 126 aa1.6□□□□□ -2.15
CNN3-206ENST00000487539 SIGMAR1Q99720 223 aa1.6□□□□□ -2.15
CNN3-206ENST00000487539 A0A087WSZ3 146 aa1.59□□□□□ -2.15
CNN3-206ENST00000487539 TRAV12-1A0A0B4J245 112 aa1.59□□□□□ -2.15
CNN3-206ENST00000487539 MYMXA0A1B0GTQ4 84 aa1.59□□□□□ -2.15
CNN3-206ENST00000487539 F8WEM9 126 aa1.59□□□□□ -2.15
CNN3-206ENST00000487539 SYS1-DBNDD2H3BUS1 97 aa1.59□□□□□ -2.15
CNN3-206ENST00000487539 SPANXA2-OT1Q8N9U9 137 aa1.59□□□□□ -2.15
CNN3-206ENST00000487539 C1orf64Q8NEQ6 169 aa1.59□□□□□ -2.15
CNN3-206ENST00000487539 HIST1H2BLQ99880 126 aa1.59□□□□□ -2.15
CNN3-206ENST00000487539 HSPB8Q9UJY1 196 aa1.59□□□□□ -2.15
CNN3-206ENST00000487539 IGHV6-1A0A0B4J1U7 121 aa1.58□□□□□ -2.16
CNN3-206ENST00000487539 DPM2O94777 84 aa1.58□□□□□ -2.16
CNN3-206ENST00000487539 IGKCP01834 107 aa1.58□□□□□ -2.16
CNN3-206ENST00000487539 P0C880 135 aa1.58□□□□□ -2.16
CNN3-206ENST00000487539 S100A2P29034 98 aa1.58□□□□□ -2.16
CNN3-206ENST00000487539 KRTAP19-7Q3SYF9 63 aa1.58□□□□□ -2.16
CNN3-206ENST00000487539 LINC01545Q5VT33 79 aa1.58□□□□□ -2.16
CNN3-206ENST00000487539 MIEN1Q9BRT3 115 aa1.58□□□□□ -2.16
CNN3-206ENST00000487539 ZNF815PA8K554 130 aa1.57□□□□□ -2.16
CNN3-206ENST00000487539 LINC00587B1AMM8 73 aa1.57□□□□□ -2.16
CNN3-206ENST00000487539 J3QQQ9 107 aa1.57□□□□□ -2.16
CNN3-206ENST00000487539 LEPROTO15243 131 aa1.57□□□□□ -2.16
CNN3-206ENST00000487539 MT1EP04732 61 aa1.57□□□□□ -2.16
CNN3-206ENST00000487539 S100A6P06703 90 aa1.57□□□□□ -2.16
CNN3-206ENST00000487539 PLNP26678 52 aa1.57□□□□□ -2.16
CNN3-206ENST00000487539 C8orf17Q9NRJ1 99 aa1.57□□□□□ -2.16
CNN3-206ENST00000487539 C12orf57Q99622 126 aa1.56□□□□□ -2.16
CNN3-206ENST00000487539 NHP2Q9NX24 153 aaKnown RBP1.56□□□□□ -2.16
CNN3-206ENST00000487539 TRAV13-2A0A0B4J235 113 aa1.55□□□□□ -2.16
CNN3-206ENST00000487539 TRBV7-6A0A0J9YX20 115 aa1.55□□□□□ -2.16
CNN3-206ENST00000487539 LINC01549A6NIU2 74 aa1.55□□□□□ -2.16
CNN3-206ENST00000487539 PYY3Q5JQD4 70 aa1.55□□□□□ -2.16
CNN3-206ENST00000487539 LINC00308Q8TCZ7 52 aa1.55□□□□□ -2.16
CNN3-206ENST00000487539 C14orf144Q96I85 54 aa1.55□□□□□ -2.16
CNN3-206ENST00000487539 SPANXDQ9BXN6 97 aa1.55□□□□□ -2.16
CNN3-206ENST00000487539 SS18L2Q9UHA2 77 aa1.55□□□□□ -2.16
CNN3-206ENST00000487539 SYNE1Q8NF91 8797 aaKnown RBP1.55□□□□□ -2.16
CNN3-206ENST00000487539 H0YAA0 97 aa1.54□□□□□ -2.16
CNN3-206ENST00000487539 SPATA45Q537H7 98 aa1.54□□□□□ -2.16
CNN3-206ENST00000487539 SCGB1D4Q6XE38 83 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms