RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 IGKV4-1P06312 121 aa5.86□□□□□ -1.47
TOP3B-216ENST00000487485 ETDBQ3ZM63 59 aa5.85□□□□□ -1.47
TOP3B-216ENST00000487485 XP32Q5T750 250 aa5.84□□□□□ -1.47
TOP3B-216ENST00000487485 NREPQ16612 68 aa5.83□□□□□ -1.48
TOP3B-216ENST00000487485 SIGMAR1Q99720 223 aa5.83□□□□□ -1.48
TOP3B-216ENST00000487485 J3KT08 172 aa5.8□□□□□ -1.48
TOP3B-216ENST00000487485 DSCR10P59022 87 aa5.78□□□□□ -1.48
TOP3B-216ENST00000487485 LINC00313P59037 77 aa5.78□□□□□ -1.48
TOP3B-216ENST00000487485 KRTAP4-1Q9BYQ7 146 aa5.78□□□□□ -1.48
TOP3B-216ENST00000487485 IGHV6-1A0A0B4J1U7 121 aa5.77□□□□□ -1.49
TOP3B-216ENST00000487485 A0A1B0GVX0 72 aa5.76□□□□□ -1.49
TOP3B-216ENST00000487485 NDUFB1O75438 58 aa5.76□□□□□ -1.49
TOP3B-216ENST00000487485 SEC61BP60468 96 aaKnown RBP5.76□□□□□ -1.49
TOP3B-216ENST00000487485 Q6ZVQ6 151 aa5.76□□□□□ -1.49
TOP3B-216ENST00000487485 LINC00846Q9NV44 126 aa5.76□□□□□ -1.49
TOP3B-216ENST00000487485 A8MWP4 228 aa5.75□□□□□ -1.49
TOP3B-216ENST00000487485 NOTCH2NLQ7Z3S9 236 aa5.75□□□□□ -1.49
TOP3B-216ENST00000487485 RPL37P61927 97 aaKnown RBP5.74□□□□□ -1.49
TOP3B-216ENST00000487485 UBL5Q9BZL1 73 aa5.74□□□□□ -1.49
TOP3B-216ENST00000487485 IGKV3D-7A0A0C4DH55 119 aa5.73□□□□□ -1.49
TOP3B-216ENST00000487485 C8orf87E5RJ46 101 aa5.73□□□□□ -1.49
TOP3B-216ENST00000487485 BPY2O14599 106 aa5.73□□□□□ -1.49
TOP3B-216ENST00000487485 ACYP1P07311 99 aa5.72□□□□□ -1.49
TOP3B-216ENST00000487485 PCOTHQ58A44 107 aa5.72□□□□□ -1.49
TOP3B-216ENST00000487485 Q75L30 129 aa5.72□□□□□ -1.49
TOP3B-216ENST00000487485 KRTAP16-1A8MUX0 517 aa5.71□□□□□ -1.5
TOP3B-216ENST00000487485 PRR15Q8IV56 129 aa5.71□□□□□ -1.5
TOP3B-216ENST00000487485 FAM240AA0A1B0GVK7 77 aa5.7□□□□□ -1.5
TOP3B-216ENST00000487485 A8MUU9 505 aa5.7□□□□□ -1.5
TOP3B-216ENST00000487485 C20orf166-AS1Q96NR2 134 aa5.7□□□□□ -1.5
TOP3B-216ENST00000487485 J3QR89 54 aa5.69□□□□□ -1.5
TOP3B-216ENST00000487485 K7EQZ3 153 aa5.69□□□□□ -1.5
TOP3B-216ENST00000487485 C8orf17Q9NRJ1 99 aa5.69□□□□□ -1.5
TOP3B-216ENST00000487485 LCE2CQ5TA81 110 aa5.68□□□□□ -1.5
TOP3B-216ENST00000487485 ATP11AUNQ6ZP68 121 aa5.68□□□□□ -1.5
TOP3B-216ENST00000487485 Q8N9L7 120 aa5.66□□□□□ -1.5
TOP3B-216ENST00000487485 MMP24-AS1A0A0U1RRL7 71 aa5.65□□□□□ -1.5
TOP3B-216ENST00000487485 CXCL6P80162 114 aa5.63□□□□□ -1.51
TOP3B-216ENST00000487485 KRTAP19-2Q3LHN2 52 aa5.63□□□□□ -1.51
TOP3B-216ENST00000487485 Q8N9P0 234 aaPredicted RBP5.63□□□□□ -1.51
TOP3B-216ENST00000487485 hDV103S1A0JD37 113 aa5.62□□□□□ -1.51
TOP3B-216ENST00000487485 MT1HP80294 61 aa5.62□□□□□ -1.51
TOP3B-216ENST00000487485 TMEM254Q8TBM7 123 aa5.62□□□□□ -1.51
TOP3B-216ENST00000487485 K7ERU9 68 aa5.61□□□□□ -1.51
TOP3B-216ENST00000487485 MRPL34Q9BQ48 92 aaKnown RBP5.61□□□□□ -1.51
TOP3B-216ENST00000487485 WFDC13Q8IUB5 93 aa5.6□□□□□ -1.51
TOP3B-216ENST00000487485 CASC2Q6XLA1 102 aa5.59□□□□□ -1.51
TOP3B-216ENST00000487485 LORP23490 312 aaPredicted RBP5.58□□□□□ -1.52
TOP3B-216ENST00000487485 LINC00643Q86TS7 51 aa5.58□□□□□ -1.52
TOP3B-216ENST00000487485 HCG22E2RYF7 251 aa5.57□□□□□ -1.52
TOP3B-216ENST00000487485 NDUFS5O43920 106 aa5.57□□□□□ -1.52
TOP3B-216ENST00000487485 ZCCHC13Q8WW36 166 aaKnown RBP5.57□□□□□ -1.52
TOP3B-216ENST00000487485 KRTAP10-6P60371 365 aaPredicted RBP5.56□□□□□ -1.52
TOP3B-216ENST00000487485 ATP5EP2Q5VTU8 51 aa5.56□□□□□ -1.52
TOP3B-216ENST00000487485 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
TOP3B-216ENST00000487485 HIST1H4AP62805 103 aaKnown RBP5.53□□□□□ -1.52
TOP3B-216ENST00000487485 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.51□□□□□ -1.53
TOP3B-216ENST00000487485 SSPOA2VEC9 5147 aa5.51□□□□□ -1.53
TOP3B-216ENST00000487485 FLGP20930 4061 aaPredicted RBP5.5□□□□□ -1.53
TOP3B-216ENST00000487485 USH2AO75445 5202 aa5.48□□□□□ -1.53
TOP3B-216ENST00000487485 SPINK7P58062 85 aa5.48□□□□□ -1.53
TOP3B-216ENST00000487485 Q5W150 140 aa5.48□□□□□ -1.53
TOP3B-216ENST00000487485 IMUPQ9GZP8 106 aa5.48□□□□□ -1.53
TOP3B-216ENST00000487485 A0A087WVE0 104 aa5.47□□□□□ -1.53
TOP3B-216ENST00000487485 M0R2T5 61 aa5.47□□□□□ -1.53
TOP3B-216ENST00000487485 TP53AIP1Q9HCN2 124 aa5.46□□□□□ -1.54
TOP3B-216ENST00000487485 HRES1P13985 223 aa5.45□□□□□ -1.54
TOP3B-216ENST00000487485 COX6B2Q6YFQ2 88 aa5.44□□□□□ -1.54
TOP3B-216ENST00000487485 FCGBPQ9Y6R7 5405 aaPredicted RBP5.42□□□□□ -1.54
TOP3B-216ENST00000487485 IGKV2D-30A0A075B6S6 120 aa5.41□□□□□ -1.54
TOP3B-216ENST00000487485 IGKV2-30P06310 120 aa5.41□□□□□ -1.54
TOP3B-216ENST00000487485 MPLKIPQ8TAP9 179 aa5.41□□□□□ -1.54
TOP3B-216ENST00000487485 RBM12B-AS1Q9P1G2 102 aa5.41□□□□□ -1.54
TOP3B-216ENST00000487485 MT-ATP8P03928 68 aa5.4□□□□□ -1.54
TOP3B-216ENST00000487485 C7orf65Q6ZTY9 151 aa5.4□□□□□ -1.54
TOP3B-216ENST00000487485 SYNE2Q8WXH0 6885 aaKnown RBP5.39□□□□□ -1.55
TOP3B-216ENST00000487485 FAM236DA0A1B0GTK5 79 aa5.38□□□□□ -1.55
TOP3B-216ENST00000487485 FAM236CP0DP71 79 aa5.38□□□□□ -1.55
TOP3B-216ENST00000487485 UQCRQO14949 82 aa5.37□□□□□ -1.55
TOP3B-216ENST00000487485 TRAV22A0A0B4J277 110 aa5.36□□□□□ -1.55
TOP3B-216ENST00000487485 SCGB1A1P11684 91 aa5.34□□□□□ -1.55
TOP3B-216ENST00000487485 OCR1Q9BZK8 76 aa5.33□□□□□ -1.56
TOP3B-216ENST00000487485 H0Y9P7 68 aa5.32□□□□□ -1.56
TOP3B-216ENST00000487485 LOC101927531A0A1B0GV80 90 aa5.31□□□□□ -1.56
TOP3B-216ENST00000487485 ATOX1O00244 68 aa5.31□□□□□ -1.56
TOP3B-216ENST00000487485 MACF1Q9UPN3 7388 aaKnown RBP5.31□□□□□ -1.56
TOP3B-216ENST00000487485 C4orf26Q17RF5 130 aa5.3□□□□□ -1.56
TOP3B-216ENST00000487485 CYP4F30PQ9H0H9 118 aa5.3□□□□□ -1.56
TOP3B-216ENST00000487485 FAM236AA0A1B0GUQ0 79 aa5.29□□□□□ -1.56
TOP3B-216ENST00000487485 FAM236BA0A1B0GV22 79 aa5.29□□□□□ -1.56
TOP3B-216ENST00000487485 C5orf47Q569G3 176 aa5.29□□□□□ -1.56
TOP3B-216ENST00000487485 SMIM20Q8N5G0 67 aa5.29□□□□□ -1.56
TOP3B-216ENST00000487485 MP68P56378 58 aa5.28□□□□□ -1.56
TOP3B-216ENST00000487485 C1orf64Q8NEQ6 169 aa5.27□□□□□ -1.57
TOP3B-216ENST00000487485 LINC00208Q96KT6 92 aa5.27□□□□□ -1.57
TOP3B-216ENST00000487485 KRTAP9-8Q9BYQ0 159 aa5.27□□□□□ -1.57
TOP3B-216ENST00000487485 H1FX-AS1Q4G0G2 97 aa5.25□□□□□ -1.57
TOP3B-216ENST00000487485 TRAV7A0A075B6U4 112 aa5.24□□□□□ -1.57
TOP3B-216ENST00000487485 H3BPC8 53 aa5.23□□□□□ -1.57
TOP3B-216ENST00000487485 KRTAP19-1Q8IUB9 90 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 217.4 ms