RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 IMUPQ9GZP8 106 aa6.37□□□□□ -1.39
VPS16-208ENST00000487461 DNAL4O96015 105 aa6.36□□□□□ -1.39
VPS16-208ENST00000487461 ATP11AUNQ6ZP68 121 aa6.35□□□□□ -1.39
VPS16-208ENST00000487461 Q75L30 129 aa6.35□□□□□ -1.39
VPS16-208ENST00000487461 H3BQ85 93 aa6.34□□□□□ -1.39
VPS16-208ENST00000487461 LINC00643Q86TS7 51 aa6.34□□□□□ -1.39
VPS16-208ENST00000487461 KRTAP9-7A8MTY7 169 aa6.32□□□□□ -1.4
VPS16-208ENST00000487461 ORMDL1Q9P0S3 153 aa6.32□□□□□ -1.4
VPS16-208ENST00000487461 JMJD7-PLA2G4BH0Y9G9 81 aa6.31□□□□□ -1.4
VPS16-208ENST00000487461 TMEM256-PLSCR3K7ERE1 68 aa6.31□□□□□ -1.4
VPS16-208ENST00000487461 Q96NJ1 140 aa6.31□□□□□ -1.4
VPS16-208ENST00000487461 NDUFV3P56181 108 aaKnown RBP6.29□□□□□ -1.4
VPS16-208ENST00000487461 GHRHP01286 108 aa6.28□□□□□ -1.4
VPS16-208ENST00000487461 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.27□□□□□ -1.41
VPS16-208ENST00000487461 C20orf166-AS1Q96NR2 134 aa6.27□□□□□ -1.41
VPS16-208ENST00000487461 ANAPC13Q9BS18 74 aa6.27□□□□□ -1.41
VPS16-208ENST00000487461 CCKP06307 115 aa6.26□□□□□ -1.41
VPS16-208ENST00000487461 A8MUU9 505 aa6.25□□□□□ -1.41
VPS16-208ENST00000487461 SS18L2Q9UHA2 77 aa6.25□□□□□ -1.41
VPS16-208ENST00000487461 A0A087WSZ3 146 aa6.23□□□□□ -1.41
VPS16-208ENST00000487461 PDE6GP18545 87 aa6.23□□□□□ -1.41
VPS16-208ENST00000487461 KRTAP9-8Q9BYQ0 159 aa6.22□□□□□ -1.41
VPS16-208ENST00000487461 C14orf132Q9NPU4 83 aa6.22□□□□□ -1.41
VPS16-208ENST00000487461 LOC110117498A0A087WWA1 95 aa6.21□□□□□ -1.42
VPS16-208ENST00000487461 DSCR10P59022 87 aa6.21□□□□□ -1.42
VPS16-208ENST00000487461 A0A1W2PNM2 257 aa6.19□□□□□ -1.42
VPS16-208ENST00000487461 RBM3P98179 157 aaKnown RBP6.19□□□□□ -1.42
VPS16-208ENST00000487461 ATP5EP2Q5VTU8 51 aa6.19□□□□□ -1.42
VPS16-208ENST00000487461 LINC00846Q9NV44 126 aa6.19□□□□□ -1.42
VPS16-208ENST00000487461 KRTAP16-1A8MUX0 517 aa6.18□□□□□ -1.42
VPS16-208ENST00000487461 HIST1H4AP62805 103 aaKnown RBP6.18□□□□□ -1.42
VPS16-208ENST00000487461 Q6ZQT0 140 aa6.16□□□□□ -1.42
VPS16-208ENST00000487461 FAM236AA0A1B0GUQ0 79 aa6.15□□□□□ -1.42
VPS16-208ENST00000487461 FAM236BA0A1B0GV22 79 aa6.15□□□□□ -1.42
VPS16-208ENST00000487461 LINC00313P59037 77 aa6.15□□□□□ -1.42
VPS16-208ENST00000487461 ATOX1O00244 68 aa6.14□□□□□ -1.43
VPS16-208ENST00000487461 NOTCH2NLQ7Z3S9 236 aa6.14□□□□□ -1.43
VPS16-208ENST00000487461 DSCR8Q96T75 97 aa6.14□□□□□ -1.43
VPS16-208ENST00000487461 UBL5Q9BZL1 73 aa6.14□□□□□ -1.43
VPS16-208ENST00000487461 UQCRQO14949 82 aa6.13□□□□□ -1.43
VPS16-208ENST00000487461 IGKV4-1P06312 121 aa6.13□□□□□ -1.43
VPS16-208ENST00000487461 TRBV7-4A0A0J9YYF1 115 aa6.12□□□□□ -1.43
VPS16-208ENST00000487461 CCDC179H3BU77 68 aa6.12□□□□□ -1.43
VPS16-208ENST00000487461 USH2AO75445 5202 aa6.11□□□□□ -1.43
VPS16-208ENST00000487461 A0A1B0GW54 56 aa6.11□□□□□ -1.43
VPS16-208ENST00000487461 DEFB116Q30KQ4 102 aa6.11□□□□□ -1.43
VPS16-208ENST00000487461 SSPOA2VEC9 5147 aa6.11□□□□□ -1.43
VPS16-208ENST00000487461 IGKV3D-7A0A0C4DH55 119 aa6.1□□□□□ -1.43
VPS16-208ENST00000487461 MT2AP02795 61 aa6.1□□□□□ -1.43
VPS16-208ENST00000487461 COX7CP15954 63 aa6.1□□□□□ -1.43
VPS16-208ENST00000487461 LINC00472Q9H8W2 130 aa6.1□□□□□ -1.43
VPS16-208ENST00000487461 FAM236DA0A1B0GTK5 79 aa6.09□□□□□ -1.43
VPS16-208ENST00000487461 FAM236CP0DP71 79 aa6.09□□□□□ -1.43
VPS16-208ENST00000487461 HRES1P13985 223 aa6.09□□□□□ -1.43
VPS16-208ENST00000487461 MPLKIPQ8TAP9 179 aa6.09□□□□□ -1.43
VPS16-208ENST00000487461 CXCL6P80162 114 aa6.08□□□□□ -1.44
VPS16-208ENST00000487461 SERP2Q8N6R1 65 aa6.07□□□□□ -1.44
VPS16-208ENST00000487461 IGHV6-1A0A0B4J1U7 121 aa6.06□□□□□ -1.44
VPS16-208ENST00000487461 MT1FP04733 61 aa6.06□□□□□ -1.44
VPS16-208ENST00000487461 RBM12B-AS1Q9P1G2 102 aa6.06□□□□□ -1.44
VPS16-208ENST00000487461 Q6ZVQ6 151 aa6.05□□□□□ -1.44
VPS16-208ENST00000487461 SMIM20Q8N5G0 67 aa6.05□□□□□ -1.44
VPS16-208ENST00000487461 LCE2BO14633 110 aa6.04□□□□□ -1.44
VPS16-208ENST00000487461 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
VPS16-208ENST00000487461 FCGBPQ9Y6R7 5405 aaPredicted RBP6.03□□□□□ -1.44
VPS16-208ENST00000487461 KRTAP10-10P60014 251 aa6.02□□□□□ -1.45
VPS16-208ENST00000487461 A0A087WVE0 104 aa6.01□□□□□ -1.45
VPS16-208ENST00000487461 A0A1B0GVX0 72 aa6□□□□□ -1.45
VPS16-208ENST00000487461 C8orf87E5RJ46 101 aa6□□□□□ -1.45
VPS16-208ENST00000487461 KRTAP19-1Q8IUB9 90 aa6□□□□□ -1.45
VPS16-208ENST00000487461 TRAV7A0A075B6U4 112 aa5.98□□□□□ -1.45
VPS16-208ENST00000487461 NREPQ16612 68 aa5.97□□□□□ -1.45
VPS16-208ENST00000487461 ZCCHC13Q8WW36 166 aaKnown RBP5.97□□□□□ -1.45
VPS16-208ENST00000487461 RPS28P62857 69 aaKnown RBP5.96□□□□□ -1.46
VPS16-208ENST00000487461 SPINK7P58062 85 aa5.95□□□□□ -1.46
VPS16-208ENST00000487461 TMEM258P61165 79 aa5.94□□□□□ -1.46
VPS16-208ENST00000487461 J3KT08 172 aa5.93□□□□□ -1.46
VPS16-208ENST00000487461 BPY2O14599 106 aa5.92□□□□□ -1.46
VPS16-208ENST00000487461 Q8N9P0 234 aaPredicted RBP5.92□□□□□ -1.46
VPS16-208ENST00000487461 KLKP1Q107X0 134 aa5.9□□□□□ -1.46
VPS16-208ENST00000487461 NDUFC1O43677 76 aa5.89□□□□□ -1.47
VPS16-208ENST00000487461 NDUFB1O75438 58 aa5.89□□□□□ -1.47
VPS16-208ENST00000487461 C8orf17Q9NRJ1 99 aa5.88□□□□□ -1.47
VPS16-208ENST00000487461 MACF1Q9UPN3 7388 aaKnown RBP5.87□□□□□ -1.47
VPS16-208ENST00000487461 A8MWP4 228 aa5.86□□□□□ -1.47
VPS16-208ENST00000487461 WFDC13Q8IUB5 93 aa5.86□□□□□ -1.47
VPS16-208ENST00000487461 C20orf197Q8N268 126 aa5.85□□□□□ -1.47
VPS16-208ENST00000487461 CYSTM1Q9H1C7 97 aa5.85□□□□□ -1.47
VPS16-208ENST00000487461 OCR1Q9BZK8 76 aa5.84□□□□□ -1.47
VPS16-208ENST00000487461 SYNE2Q8WXH0 6885 aaKnown RBP5.84□□□□□ -1.47
VPS16-208ENST00000487461 KRTAP19-6Q3LI70 58 aa5.83□□□□□ -1.48
VPS16-208ENST00000487461 H7BZZ5 65 aa5.82□□□□□ -1.48
VPS16-208ENST00000487461 ATP5EP56381 51 aaPredicted RBP5.81□□□□□ -1.48
VPS16-208ENST00000487461 PRR15Q8IV56 129 aa5.8□□□□□ -1.48
VPS16-208ENST00000487461 Q8N9L7 120 aa5.79□□□□□ -1.48
VPS16-208ENST00000487461 TMEM254Q8TBM7 123 aa5.79□□□□□ -1.48
VPS16-208ENST00000487461 SERP1Q9Y6X1 66 aa5.77□□□□□ -1.49
VPS16-208ENST00000487461 MMP24-AS1A0A0U1RRL7 71 aa5.76□□□□□ -1.49
VPS16-208ENST00000487461 H1FX-AS1Q4G0G2 97 aa5.76□□□□□ -1.49
VPS16-208ENST00000487461 C5orf47Q569G3 176 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms