RNA–Protein interactions for RNA: ENST00000487251.5

LRRC1-203, Transcript of leucine rich repeat containing 1, humanhuman

TSL 2

Gene LRRC1, Length 2,527 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-203ENST00000487251 PMAIP1Q13794 54 aa13.55□□□□□ -0.24
LRRC1-203ENST00000487251 PKHD1P08F94 4074 aa13.55□□□□□ -0.24
LRRC1-203ENST00000487251 KRTAP29-1A8MX34 341 aaPredicted RBP13.55□□□□□ -0.24
LRRC1-203ENST00000487251 Q5VV11 94 aa13.52□□□□□ -0.24
LRRC1-203ENST00000487251 Q6ZSA8 131 aa13.52□□□□□ -0.25
LRRC1-203ENST00000487251 VPS13BQ7Z7G8 4022 aa13.5□□□□□ -0.25
LRRC1-203ENST00000487251 H0Y9P7 68 aa13.49□□□□□ -0.25
LRRC1-203ENST00000487251 Q96NJ1 140 aa13.47□□□□□ -0.25
LRRC1-203ENST00000487251 CASC2Q6XLA1 102 aa13.46□□□□□ -0.26
LRRC1-203ENST00000487251 A8MWP4 228 aa13.45□□□□□ -0.26
LRRC1-203ENST00000487251 Q8N9P0 234 aaPredicted RBP13.45□□□□□ -0.26
LRRC1-203ENST00000487251 SPANXA2-OT1Q8N9U9 137 aa13.44□□□□□ -0.26
LRRC1-203ENST00000487251 CHKB-CPT1BH3BT56 60 aa13.38□□□□□ -0.27
LRRC1-203ENST00000487251 H3BPC8 53 aa13.37□□□□□ -0.27
LRRC1-203ENST00000487251 PRR15LQ9BU68 103 aa13.37□□□□□ -0.27
LRRC1-203ENST00000487251 A0A087X002 238 aa13.34□□□□□ -0.27
LRRC1-203ENST00000487251 LIMD2Q9BT23 127 aa13.34□□□□□ -0.27
LRRC1-203ENST00000487251 MMP24-AS1A0A0U1RRL7 71 aa13.32□□□□□ -0.28
LRRC1-203ENST00000487251 DYNC1H1Q14204 4646 aaKnown RBP13.32□□□□□ -0.28
LRRC1-203ENST00000487251 COA5Q86WW8 74 aa13.29□□□□□ -0.28
LRRC1-203ENST00000487251 KRTAP13-2Q52LG2 175 aa13.28□□□□□ -0.28
LRRC1-203ENST00000487251 LCA10Q71F78 164 aa13.26□□□□□ -0.29
LRRC1-203ENST00000487251 IGHV6-1A0A0B4J1U7 121 aa13.26□□□□□ -0.29
LRRC1-203ENST00000487251 SPINK6Q6UWN8 80 aa13.26□□□□□ -0.29
LRRC1-203ENST00000487251 RYR2Q92736 4967 aa13.25□□□□□ -0.29
LRRC1-203ENST00000487251 KMT2CQ8NEZ4 4911 aaKnown RBP13.24□□□□□ -0.29
LRRC1-203ENST00000487251 IGLV7-46A0A075B6I9 117 aa13.22□□□□□ -0.29
LRRC1-203ENST00000487251 Q75L30 129 aa13.22□□□□□ -0.29
LRRC1-203ENST00000487251 SSBP3-AS1Q7Z2R9 100 aa13.22□□□□□ -0.29
LRRC1-203ENST00000487251 PCOTHQ58A44 107 aa13.22□□□□□ -0.29
LRRC1-203ENST00000487251 SPTSSBQ8NFR3 76 aa13.22□□□□□ -0.29
LRRC1-203ENST00000487251 NOTCH2NLQ7Z3S9 236 aa13.21□□□□□ -0.29
LRRC1-203ENST00000487251 A0A1B0GVX0 72 aa13.21□□□□□ -0.29
LRRC1-203ENST00000487251 KRTAP1-4P0C5Y4 121 aa13.21□□□□□ -0.29
LRRC1-203ENST00000487251 C8orf17Q9NRJ1 99 aa13.21□□□□□ -0.29
LRRC1-203ENST00000487251 LOC101927531A0A1B0GV80 90 aa13.19□□□□□ -0.3
LRRC1-203ENST00000487251 A6NED7 52 aa13.18□□□□□ -0.3
LRRC1-203ENST00000487251 CD164Q04900 197 aa13.18□□□□□ -0.3
LRRC1-203ENST00000487251 CDK2AP2O75956 126 aa13.17□□□□□ -0.3
LRRC1-203ENST00000487251 APOBP04114 4563 aaKnown RBP13.15□□□□□ -0.3
LRRC1-203ENST00000487251 ASB16-AS1Q495Z4 193 aa13.15□□□□□ -0.3
LRRC1-203ENST00000487251 SMR3BP02814 79 aaPredicted RBP13.14□□□□□ -0.31
LRRC1-203ENST00000487251 A0A1B0GVY2 172 aa13.13□□□□□ -0.31
LRRC1-203ENST00000487251 KTN1-AS1Q86SY8 53 aa13.13□□□□□ -0.31
LRRC1-203ENST00000487251 FAT1Q14517 4588 aa13.13□□□□□ -0.31
LRRC1-203ENST00000487251 ATP11AUNQ6ZP68 121 aa13.11□□□□□ -0.31
LRRC1-203ENST00000487251 SPAG11AQ6PDA7 123 aa13.1□□□□□ -0.31
LRRC1-203ENST00000487251 PLA2G1BP04054 148 aaKnown RBP13.08□□□□□ -0.32
LRRC1-203ENST00000487251 A6NN06 94 aa13.07□□□□□ -0.32
LRRC1-203ENST00000487251 NDUFS5O43920 106 aa13.07□□□□□ -0.32
LRRC1-203ENST00000487251 CDC42SE1Q9NRR8 79 aa13.05□□□□□ -0.32
LRRC1-203ENST00000487251 LINC01558Q9Y6Z2 57 aa13.05□□□□□ -0.32
LRRC1-203ENST00000487251 MRPL34Q9BQ48 92 aaKnown RBP13.04□□□□□ -0.32
LRRC1-203ENST00000487251 TP53AIP1Q9HCN2 124 aa13.03□□□□□ -0.32
LRRC1-203ENST00000487251 RBM12B-AS1Q9P1G2 102 aa13.01□□□□□ -0.33
LRRC1-203ENST00000487251 HRES1P13985 223 aa13□□□□□ -0.33
LRRC1-203ENST00000487251 TYMSOSQ8TAI1 123 aa12.99□□□□□ -0.33
LRRC1-203ENST00000487251 SPINK7P58062 85 aa12.98□□□□□ -0.33
LRRC1-203ENST00000487251 PRR26Q8N8Z3 221 aa12.96□□□□□ -0.33
LRRC1-203ENST00000487251 KRTAP10-4P60372 401 aaPredicted RBP12.9□□□□□ -0.34
LRRC1-203ENST00000487251 C4orf48Q5BLP8 95 aa12.89□□□□□ -0.35
LRRC1-203ENST00000487251 RYR3Q15413 4870 aa12.88□□□□□ -0.35
LRRC1-203ENST00000487251 LINC00313P59037 77 aa12.88□□□□□ -0.35
LRRC1-203ENST00000487251 Q5W150 140 aa12.88□□□□□ -0.35
LRRC1-203ENST00000487251 C8orf87E5RJ46 101 aa12.86□□□□□ -0.35
LRRC1-203ENST00000487251 C7orf65Q6ZTY9 151 aa12.84□□□□□ -0.35
LRRC1-203ENST00000487251 SPINK1P00995 79 aa12.82□□□□□ -0.36
LRRC1-203ENST00000487251 PKHD1L1Q86WI1 4243 aa12.82□□□□□ -0.36
LRRC1-203ENST00000487251 LINC00304Q8N9R0 145 aa12.81□□□□□ -0.36
LRRC1-203ENST00000487251 KRTAP13-3Q3SY46 172 aa12.79□□□□□ -0.36
LRRC1-203ENST00000487251 RETNLBQ9BQ08 111 aa12.79□□□□□ -0.36
LRRC1-203ENST00000487251 KRTAP16-1A8MUX0 517 aa12.77□□□□□ -0.37
LRRC1-203ENST00000487251 HSPG2P98160 4391 aa12.72□□□□□ -0.37
LRRC1-203ENST00000487251 LRP1Q07954 4544 aaKnown RBP12.66□□□□□ -0.38
LRRC1-203ENST00000487251 RPS29P62273 56 aaKnown RBP12.62□□□□□ -0.39
LRRC1-203ENST00000487251 FAM229AH3BQW9 127 aa12.61□□□□□ -0.39
LRRC1-203ENST00000487251 ACYP2P14621 99 aa12.61□□□□□ -0.39
LRRC1-203ENST00000487251 PRAC1Q96KF2 57 aa12.59□□□□□ -0.39
LRRC1-203ENST00000487251 RYR1P21817 5038 aa12.57□□□□□ -0.4
LRRC1-203ENST00000487251 TNXBP22105 4242 aa12.56□□□□□ -0.4
LRRC1-203ENST00000487251 DMAC1Q96GE9 116 aa12.55□□□□□ -0.4
LRRC1-203ENST00000487251 ADM2Q7Z4H4 148 aa12.55□□□□□ -0.4
LRRC1-203ENST00000487251 Q5VSD8 79 aa12.52□□□□□ -0.4
LRRC1-203ENST00000487251 KRTAP17-1Q9BYP8 105 aa12.52□□□□□ -0.4
LRRC1-203ENST00000487251 FLG2Q5D862 2391 aaPredicted RBP12.51□□□□□ -0.41
LRRC1-203ENST00000487251 C9orf92A6NGG3 77 aa12.51□□□□□ -0.41
LRRC1-203ENST00000487251 IGKV2-30P06310 120 aa12.51□□□□□ -0.41
LRRC1-203ENST00000487251 KIAA1109Q2LD37 5005 aa12.47□□□□□ -0.41
LRRC1-203ENST00000487251 A0A1B0GU69 56 aa12.47□□□□□ -0.41
LRRC1-203ENST00000487251 IGKV2D-30A0A075B6S6 120 aa12.46□□□□□ -0.41
LRRC1-203ENST00000487251 Q8N1X5 172 aa12.45□□□□□ -0.42
LRRC1-203ENST00000487251 FAT3Q8TDW7 4589 aa12.45□□□□□ -0.42
LRRC1-203ENST00000487251 EPPK1P58107 5090 aaKnown RBP12.41□□□□□ -0.42
LRRC1-203ENST00000487251 SPATA8Q6RVD6 105 aa12.41□□□□□ -0.42
LRRC1-203ENST00000487251 MYCBP2O75592 4640 aa12.37□□□□□ -0.43
LRRC1-203ENST00000487251 KRTAP10-8P60410 259 aa12.35□□□□□ -0.43
LRRC1-203ENST00000487251 MIR22HGQ0VDD5 57 aa12.33□□□□□ -0.44
LRRC1-203ENST00000487251 DMBT1Q9UGM3 2413 aaPredicted RBP12.31□□□□□ -0.44
LRRC1-203ENST00000487251 A8MUU9 505 aa12.29□□□□□ -0.44
LRRC1-203ENST00000487251 C20orf166-AS1Q96NR2 134 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms