RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 PKHD1P08F94 4074 aa4.17□□□□□ -1.74
CCNB3-206ENST00000487204 IGKV4-1P06312 121 aa4.17□□□□□ -1.74
CCNB3-206ENST00000487204 OXTP01178 125 aa4.16□□□□□ -1.74
CCNB3-206ENST00000487204 DSCR10P59022 87 aa4.16□□□□□ -1.74
CCNB3-206ENST00000487204 PRR15Q8IV56 129 aa4.16□□□□□ -1.74
CCNB3-206ENST00000487204 Q96NJ1 140 aa4.16□□□□□ -1.74
CCNB3-206ENST00000487204 DNAH5Q8TE73 4624 aa4.16□□□□□ -1.74
CCNB3-206ENST00000487204 FAM236AA0A1B0GUQ0 79 aa4.15□□□□□ -1.75
CCNB3-206ENST00000487204 FAM236BA0A1B0GV22 79 aa4.15□□□□□ -1.75
CCNB3-206ENST00000487204 ATOX1O00244 68 aa4.15□□□□□ -1.75
CCNB3-206ENST00000487204 KRTAP10-8P60410 259 aa4.15□□□□□ -1.75
CCNB3-206ENST00000487204 SMIM20Q8N5G0 67 aa4.15□□□□□ -1.75
CCNB3-206ENST00000487204 DNAH8Q96JB1 4490 aa4.14□□□□□ -1.75
CCNB3-206ENST00000487204 KRTAP9-7A8MTY7 169 aa4.14□□□□□ -1.75
CCNB3-206ENST00000487204 K7EQZ3 153 aa4.14□□□□□ -1.75
CCNB3-206ENST00000487204 DEFB116Q30KQ4 102 aa4.14□□□□□ -1.75
CCNB3-206ENST00000487204 A0A087WVE0 104 aa4.13□□□□□ -1.75
CCNB3-206ENST00000487204 A0A1B0GVX0 72 aa4.13□□□□□ -1.75
CCNB3-206ENST00000487204 HCG22E2RYF7 251 aa4.13□□□□□ -1.75
CCNB3-206ENST00000487204 C8orf87E5RJ46 101 aa4.13□□□□□ -1.75
CCNB3-206ENST00000487204 C1orf195Q5TG92 126 aa4.13□□□□□ -1.75
CCNB3-206ENST00000487204 LRP1BQ9NZR2 4599 aa4.12□□□□□ -1.75
CCNB3-206ENST00000487204 Q8N9L7 120 aa4.12□□□□□ -1.75
CCNB3-206ENST00000487204 ANAPC13Q9BS18 74 aa4.11□□□□□ -1.75
CCNB3-206ENST00000487204 IGHV6-1A0A0B4J1U7 121 aa4.1□□□□□ -1.75
CCNB3-206ENST00000487204 CASC2Q6XLA1 102 aa4.1□□□□□ -1.75
CCNB3-206ENST00000487204 VPS13BQ7Z7G8 4022 aa4.1□□□□□ -1.75
CCNB3-206ENST00000487204 hDV103S1A0JD37 113 aa4.09□□□□□ -1.75
CCNB3-206ENST00000487204 KRTAP29-1A8MX34 341 aaPredicted RBP4.09□□□□□ -1.75
CCNB3-206ENST00000487204 LINC00313P59037 77 aa4.09□□□□□ -1.75
CCNB3-206ENST00000487204 C8orf17Q9NRJ1 99 aa4.09□□□□□ -1.75
CCNB3-206ENST00000487204 DYNC1H1Q14204 4646 aaKnown RBP4.08□□□□□ -1.76
CCNB3-206ENST00000487204 MMP24-AS1A0A0U1RRL7 71 aa4.08□□□□□ -1.76
CCNB3-206ENST00000487204 FP248Q71RG6 208 aaPredicted RBP4.08□□□□□ -1.76
CCNB3-206ENST00000487204 SERP2Q8N6R1 65 aa4.08□□□□□ -1.76
CCNB3-206ENST00000487204 TMEM254Q8TBM7 123 aa4.08□□□□□ -1.76
CCNB3-206ENST00000487204 TRAV7A0A075B6U4 112 aa4.07□□□□□ -1.76
CCNB3-206ENST00000487204 PCP4P48539 62 aa4.07□□□□□ -1.76
CCNB3-206ENST00000487204 WFDC13Q8IUB5 93 aa4.07□□□□□ -1.76
CCNB3-206ENST00000487204 TP53AIP1Q9HCN2 124 aa4.07□□□□□ -1.76
CCNB3-206ENST00000487204 MT1HL1P0DM35 61 aa4.06□□□□□ -1.76
CCNB3-206ENST00000487204 MRPL34Q9BQ48 92 aaKnown RBP4.06□□□□□ -1.76
CCNB3-206ENST00000487204 RYR3Q15413 4870 aa4.05□□□□□ -1.76
CCNB3-206ENST00000487204 UQCRQO14949 82 aa4.05□□□□□ -1.76
CCNB3-206ENST00000487204 COX7CP15954 63 aa4.05□□□□□ -1.76
CCNB3-206ENST00000487204 APOBP04114 4563 aaKnown RBP4.05□□□□□ -1.76
CCNB3-206ENST00000487204 C5orf47Q569G3 176 aa4.04□□□□□ -1.76
CCNB3-206ENST00000487204 OCR1Q9BZK8 76 aa4.04□□□□□ -1.76
CCNB3-206ENST00000487204 KRTAP9-3Q9BYQ3 159 aa4.03□□□□□ -1.76
CCNB3-206ENST00000487204 NDUFS5O43920 106 aa4.02□□□□□ -1.77
CCNB3-206ENST00000487204 H3BPC8 53 aa4.01□□□□□ -1.77
CCNB3-206ENST00000487204 MP68P56378 58 aa4.01□□□□□ -1.77
CCNB3-206ENST00000487204 NOTCH2NLQ7Z3S9 236 aa4.01□□□□□ -1.77
CCNB3-206ENST00000487204 Q8N9P0 234 aaPredicted RBP4.01□□□□□ -1.77
CCNB3-206ENST00000487204 HSPG2P98160 4391 aa4.01□□□□□ -1.77
CCNB3-206ENST00000487204 IGLV7-46A0A075B6I9 117 aa4□□□□□ -1.77
CCNB3-206ENST00000487204 RETNLBQ9BQ08 111 aa4□□□□□ -1.77
CCNB3-206ENST00000487204 TRAV22A0A0B4J277 110 aa3.99□□□□□ -1.77
CCNB3-206ENST00000487204 KRTAP16-1A8MUX0 517 aa3.99□□□□□ -1.77
CCNB3-206ENST00000487204 FLG2Q5D862 2391 aaPredicted RBP3.98□□□□□ -1.77
CCNB3-206ENST00000487204 NDUFC1O43677 76 aa3.98□□□□□ -1.77
CCNB3-206ENST00000487204 KLKP1Q107X0 134 aa3.97□□□□□ -1.77
CCNB3-206ENST00000487204 PRR4Q16378 134 aa3.97□□□□□ -1.77
CCNB3-206ENST00000487204 C20orf166-AS1Q96NR2 134 aa3.97□□□□□ -1.77
CCNB3-206ENST00000487204 FAT1Q14517 4588 aa3.96□□□□□ -1.78
CCNB3-206ENST00000487204 H0Y9P7 68 aa3.96□□□□□ -1.78
CCNB3-206ENST00000487204 CCDC179H3BU77 68 aa3.96□□□□□ -1.78
CCNB3-206ENST00000487204 C20orf197Q8N268 126 aa3.96□□□□□ -1.78
CCNB3-206ENST00000487204 C9orf92A6NGG3 77 aa3.95□□□□□ -1.78
CCNB3-206ENST00000487204 A8MUU9 505 aa3.95□□□□□ -1.78
CCNB3-206ENST00000487204 TPRXLQ17RH7 258 aa3.95□□□□□ -1.78
CCNB3-206ENST00000487204 Q75L30 129 aa3.95□□□□□ -1.78
CCNB3-206ENST00000487204 A0A0U1RQV1 116 aa3.94□□□□□ -1.78
CCNB3-206ENST00000487204 LOC101927531A0A1B0GV80 90 aa3.94□□□□□ -1.78
CCNB3-206ENST00000487204 KRTAP13-3Q3SY46 172 aa3.94□□□□□ -1.78
CCNB3-206ENST00000487204 PKHD1L1Q86WI1 4243 aa3.94□□□□□ -1.78
CCNB3-206ENST00000487204 DMBT1Q9UGM3 2413 aaPredicted RBP3.94□□□□□ -1.78
CCNB3-206ENST00000487204 RYR1P21817 5038 aa3.94□□□□□ -1.78
CCNB3-206ENST00000487204 C1orf64Q8NEQ6 169 aa3.93□□□□□ -1.78
CCNB3-206ENST00000487204 ZCCHC13Q8WW36 166 aaKnown RBP3.93□□□□□ -1.78
CCNB3-206ENST00000487204 LINC00208Q96KT6 92 aa3.93□□□□□ -1.78
CCNB3-206ENST00000487204 KIAA1109Q2LD37 5005 aa3.93□□□□□ -1.78
CCNB3-206ENST00000487204 ATP11AUNQ6ZP68 121 aa3.92□□□□□ -1.78
CCNB3-206ENST00000487204 SNURFQ9Y675 71 aa3.92□□□□□ -1.78
CCNB3-206ENST00000487204 EPPK1P58107 5090 aaKnown RBP3.91□□□□□ -1.78
CCNB3-206ENST00000487204 TMEM258P61165 79 aa3.9□□□□□ -1.79
CCNB3-206ENST00000487204 RPL37P61927 97 aaKnown RBP3.9□□□□□ -1.79
CCNB3-206ENST00000487204 Q5W150 140 aa3.9□□□□□ -1.79
CCNB3-206ENST00000487204 KRTAP3-1Q9BYR8 98 aa3.9□□□□□ -1.79
CCNB3-206ENST00000487204 ATP5EP56381 51 aaPredicted RBP3.89□□□□□ -1.79
CCNB3-206ENST00000487204 H7BZZ5 65 aa3.88□□□□□ -1.79
CCNB3-206ENST00000487204 IGKV2-30P06310 120 aa3.88□□□□□ -1.79
CCNB3-206ENST00000487204 C7orf65Q6ZTY9 151 aa3.87□□□□□ -1.79
CCNB3-206ENST00000487204 SPANXA2-OT1Q8N9U9 137 aa3.87□□□□□ -1.79
CCNB3-206ENST00000487204 CYP4F30PQ9H0H9 118 aa3.87□□□□□ -1.79
CCNB3-206ENST00000487204 TNXBP22105 4242 aa3.84□□□□□ -1.79
CCNB3-206ENST00000487204 LRP1Q07954 4544 aaKnown RBP3.84□□□□□ -1.79
CCNB3-206ENST00000487204 IGKV2D-30A0A075B6S6 120 aa3.84□□□□□ -1.79
CCNB3-206ENST00000487204 FAM236DA0A1B0GTK5 79 aa3.84□□□□□ -1.79
CCNB3-206ENST00000487204 FAM236CP0DP71 79 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms