RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 LINC00304Q8N9R0 145 aa4.95□□□□□ -1.62
NUDCD3-209ENST00000487118 A8MWP4 228 aa4.94□□□□□ -1.62
NUDCD3-209ENST00000487118 K7EQZ3 153 aa4.94□□□□□ -1.62
NUDCD3-209ENST00000487118 C4orf48Q5BLP8 95 aa4.94□□□□□ -1.62
NUDCD3-209ENST00000487118 LIMD2Q9BT23 127 aa4.94□□□□□ -1.62
NUDCD3-209ENST00000487118 MUC2Q02817 5179 aa4.93□□□□□ -1.62
NUDCD3-209ENST00000487118 KRTAP10-8P60410 259 aa4.92□□□□□ -1.62
NUDCD3-209ENST00000487118 PRR15Q8IV56 129 aa4.92□□□□□ -1.62
NUDCD3-209ENST00000487118 C1orf195Q5TG92 126 aa4.91□□□□□ -1.62
NUDCD3-209ENST00000487118 TNXBP22105 4242 aa4.9□□□□□ -1.62
NUDCD3-209ENST00000487118 KRTAP29-1A8MX34 341 aaPredicted RBP4.9□□□□□ -1.63
NUDCD3-209ENST00000487118 ATOX1O00244 68 aa4.9□□□□□ -1.63
NUDCD3-209ENST00000487118 NDUFB1O75438 58 aa4.9□□□□□ -1.63
NUDCD3-209ENST00000487118 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.63
NUDCD3-209ENST00000487118 A0A1B0GVX0 72 aa4.89□□□□□ -1.63
NUDCD3-209ENST00000487118 HCG22E2RYF7 251 aa4.88□□□□□ -1.63
NUDCD3-209ENST00000487118 MMP24-AS1A0A0U1RRL7 71 aa4.87□□□□□ -1.63
NUDCD3-209ENST00000487118 PCP4P48539 62 aa4.87□□□□□ -1.63
NUDCD3-209ENST00000487118 ANAPC13Q9BS18 74 aa4.87□□□□□ -1.63
NUDCD3-209ENST00000487118 MT1HL1P0DM35 61 aa4.86□□□□□ -1.63
NUDCD3-209ENST00000487118 C8orf17Q9NRJ1 99 aa4.86□□□□□ -1.63
NUDCD3-209ENST00000487118 OXTP01178 125 aa4.85□□□□□ -1.63
NUDCD3-209ENST00000487118 IGHV6-1A0A0B4J1U7 121 aa4.84□□□□□ -1.63
NUDCD3-209ENST00000487118 C8orf87E5RJ46 101 aa4.84□□□□□ -1.63
NUDCD3-209ENST00000487118 CASC2Q6XLA1 102 aa4.84□□□□□ -1.63
NUDCD3-209ENST00000487118 WFDC13Q8IUB5 93 aa4.84□□□□□ -1.63
NUDCD3-209ENST00000487118 SMIM20Q8N5G0 67 aa4.84□□□□□ -1.63
NUDCD3-209ENST00000487118 TRAV7A0A075B6U4 112 aa4.83□□□□□ -1.64
NUDCD3-209ENST00000487118 NOTCH2NLQ7Z3S9 236 aa4.83□□□□□ -1.64
NUDCD3-209ENST00000487118 SERP2Q8N6R1 65 aa4.83□□□□□ -1.64
NUDCD3-209ENST00000487118 OCR1Q9BZK8 76 aa4.83□□□□□ -1.64
NUDCD3-209ENST00000487118 LRP2P98164 4655 aa4.83□□□□□ -1.64
NUDCD3-209ENST00000487118 FAT4Q6V0I7 4981 aa4.83□□□□□ -1.64
NUDCD3-209ENST00000487118 hDV103S1A0JD37 113 aa4.82□□□□□ -1.64
NUDCD3-209ENST00000487118 TMEM254Q8TBM7 123 aa4.82□□□□□ -1.64
NUDCD3-209ENST00000487118 COX7CP15954 63 aa4.81□□□□□ -1.64
NUDCD3-209ENST00000487118 LINC00313P59037 77 aa4.8□□□□□ -1.64
NUDCD3-209ENST00000487118 MRPL34Q9BQ48 92 aaKnown RBP4.8□□□□□ -1.64
NUDCD3-209ENST00000487118 UQCRQO14949 82 aa4.79□□□□□ -1.64
NUDCD3-209ENST00000487118 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
NUDCD3-209ENST00000487118 KRTAP16-1A8MUX0 517 aa4.78□□□□□ -1.64
NUDCD3-209ENST00000487118 CCDC179H3BU77 68 aa4.77□□□□□ -1.65
NUDCD3-209ENST00000487118 FP248Q71RG6 208 aaPredicted RBP4.77□□□□□ -1.65
NUDCD3-209ENST00000487118 RETNLBQ9BQ08 111 aa4.77□□□□□ -1.65
NUDCD3-209ENST00000487118 LPAP08519 4548 aa4.76□□□□□ -1.65
NUDCD3-209ENST00000487118 Q8N9P0 234 aaPredicted RBP4.76□□□□□ -1.65
NUDCD3-209ENST00000487118 TP53AIP1Q9HCN2 124 aa4.76□□□□□ -1.65
NUDCD3-209ENST00000487118 FSIP2Q5CZC0 6907 aa4.76□□□□□ -1.65
NUDCD3-209ENST00000487118 C5orf47Q569G3 176 aa4.74□□□□□ -1.65
NUDCD3-209ENST00000487118 A0A0U1RQV1 116 aa4.72□□□□□ -1.65
NUDCD3-209ENST00000487118 NDUFS5O43920 106 aa4.72□□□□□ -1.65
NUDCD3-209ENST00000487118 KLKP1Q107X0 134 aa4.72□□□□□ -1.65
NUDCD3-209ENST00000487118 C20orf197Q8N268 126 aa4.72□□□□□ -1.65
NUDCD3-209ENST00000487118 TRAV22A0A0B4J277 110 aa4.71□□□□□ -1.66
NUDCD3-209ENST00000487118 IGLV7-46A0A075B6I9 117 aa4.7□□□□□ -1.66
NUDCD3-209ENST00000487118 C9orf92A6NGG3 77 aa4.7□□□□□ -1.66
NUDCD3-209ENST00000487118 H0Y9P7 68 aa4.7□□□□□ -1.66
NUDCD3-209ENST00000487118 H3BPC8 53 aa4.7□□□□□ -1.66
NUDCD3-209ENST00000487118 KRTAP13-3Q3SY46 172 aa4.7□□□□□ -1.66
NUDCD3-209ENST00000487118 ZCCHC13Q8WW36 166 aaKnown RBP4.7□□□□□ -1.66
NUDCD3-209ENST00000487118 C20orf166-AS1Q96NR2 134 aa4.7□□□□□ -1.66
NUDCD3-209ENST00000487118 A8MUU9 505 aa4.69□□□□□ -1.66
NUDCD3-209ENST00000487118 MP68P56378 58 aa4.69□□□□□ -1.66
NUDCD3-209ENST00000487118 CYSTM1Q9H1C7 97 aa4.69□□□□□ -1.66
NUDCD3-209ENST00000487118 Q5W150 140 aa4.68□□□□□ -1.66
NUDCD3-209ENST00000487118 SNURFQ9Y675 71 aa4.68□□□□□ -1.66
NUDCD3-209ENST00000487118 NDUFC1O43677 76 aa4.66□□□□□ -1.66
NUDCD3-209ENST00000487118 Q75L30 129 aa4.66□□□□□ -1.66
NUDCD3-209ENST00000487118 LINC00208Q96KT6 92 aa4.66□□□□□ -1.66
NUDCD3-209ENST00000487118 H7BZZ5 65 aa4.65□□□□□ -1.67
NUDCD3-209ENST00000487118 PRR4Q16378 134 aa4.65□□□□□ -1.67
NUDCD3-209ENST00000487118 C1orf64Q8NEQ6 169 aa4.65□□□□□ -1.67
NUDCD3-209ENST00000487118 TPRXLQ17RH7 258 aa4.64□□□□□ -1.67
NUDCD3-209ENST00000487118 LOC101927531A0A1B0GV80 90 aa4.63□□□□□ -1.67
NUDCD3-209ENST00000487118 LCE2AQ5TA79 106 aaPredicted RBP4.63□□□□□ -1.67
NUDCD3-209ENST00000487118 XP32Q5T750 250 aa4.62□□□□□ -1.67
NUDCD3-209ENST00000487118 IGKV2-30P06310 120 aa4.61□□□□□ -1.67
NUDCD3-209ENST00000487118 TMEM258P61165 79 aa4.61□□□□□ -1.67
NUDCD3-209ENST00000487118 RPL37P61927 97 aaKnown RBP4.61□□□□□ -1.67
NUDCD3-209ENST00000487118 LCE2DQ5TA82 110 aaPredicted RBP4.61□□□□□ -1.67
NUDCD3-209ENST00000487118 CYP4F30PQ9H0H9 118 aa4.6□□□□□ -1.67
NUDCD3-209ENST00000487118 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.59□□□□□ -1.67
NUDCD3-209ENST00000487118 FAM236DA0A1B0GTK5 79 aa4.56□□□□□ -1.68
NUDCD3-209ENST00000487118 FAM236CP0DP71 79 aa4.56□□□□□ -1.68
NUDCD3-209ENST00000487118 ATP5EP56381 51 aaPredicted RBP4.56□□□□□ -1.68
NUDCD3-209ENST00000487118 PCOTHQ58A44 107 aa4.56□□□□□ -1.68
NUDCD3-209ENST00000487118 SPANXA2-OT1Q8N9U9 137 aa4.56□□□□□ -1.68
NUDCD3-209ENST00000487118 IGKV2D-30A0A075B6S6 120 aa4.55□□□□□ -1.68
NUDCD3-209ENST00000487118 ATP11AUNQ6ZP68 121 aa4.55□□□□□ -1.68
NUDCD3-209ENST00000487118 C7orf65Q6ZTY9 151 aa4.55□□□□□ -1.68
NUDCD3-209ENST00000487118 HRES1P13985 223 aa4.52□□□□□ -1.69
NUDCD3-209ENST00000487118 SPINK7P58062 85 aa4.51□□□□□ -1.69
NUDCD3-209ENST00000487118 MUC17Q685J3 4493 aa4.51□□□□□ -1.69
NUDCD3-209ENST00000487118 SEC61BP60468 96 aaKnown RBP4.47□□□□□ -1.69
NUDCD3-209ENST00000487118 SERP1Q9Y6X1 66 aa4.47□□□□□ -1.69
NUDCD3-209ENST00000487118 RPS28P62857 69 aaKnown RBP4.46□□□□□ -1.7
NUDCD3-209ENST00000487118 DMAC1Q96GE9 116 aa4.46□□□□□ -1.7
NUDCD3-209ENST00000487118 C4orf26Q17RF5 130 aa4.43□□□□□ -1.7
NUDCD3-209ENST00000487118 A8MUN3 132 aa4.42□□□□□ -1.7
NUDCD3-209ENST00000487118 ACYP2P14621 99 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms