RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 A0A087WVE0 104 aa4.15□□□□□ -1.75
SF3A3-206ENST00000487062 A0A087X002 238 aa4.15□□□□□ -1.75
SF3A3-206ENST00000487062 KMT2CQ8NEZ4 4911 aaKnown RBP4.15□□□□□ -1.75
SF3A3-206ENST00000487062 IGKV4-1P06312 121 aa4.14□□□□□ -1.75
SF3A3-206ENST00000487062 KRTAP13-2Q52LG2 175 aa4.14□□□□□ -1.75
SF3A3-206ENST00000487062 TYMSOSQ8TAI1 123 aa4.14□□□□□ -1.75
SF3A3-206ENST00000487062 LINC00472Q9H8W2 130 aa4.14□□□□□ -1.75
SF3A3-206ENST00000487062 PKHD1P08F94 4074 aa4.13□□□□□ -1.75
SF3A3-206ENST00000487062 NDUFB1O75438 58 aa4.13□□□□□ -1.75
SF3A3-206ENST00000487062 DSCR10P59022 87 aa4.13□□□□□ -1.75
SF3A3-206ENST00000487062 KRTAP10-4P60372 401 aaPredicted RBP4.13□□□□□ -1.75
SF3A3-206ENST00000487062 DEFB116Q30KQ4 102 aa4.13□□□□□ -1.75
SF3A3-206ENST00000487062 KRTAP19-4Q3LI73 84 aa4.13□□□□□ -1.75
SF3A3-206ENST00000487062 C5orf47Q569G3 176 aa4.13□□□□□ -1.75
SF3A3-206ENST00000487062 MPLKIPQ8TAP9 179 aa4.13□□□□□ -1.75
SF3A3-206ENST00000487062 LIMD2Q9BT23 127 aa4.13□□□□□ -1.75
SF3A3-206ENST00000487062 ASB16-AS1Q495Z4 193 aa4.12□□□□□ -1.75
SF3A3-206ENST00000487062 Q8N9L7 120 aa4.12□□□□□ -1.75
SF3A3-206ENST00000487062 APOBP04114 4563 aaKnown RBP4.11□□□□□ -1.75
SF3A3-206ENST00000487062 A8MWP4 228 aa4.11□□□□□ -1.75
SF3A3-206ENST00000487062 K7EQZ3 153 aa4.11□□□□□ -1.75
SF3A3-206ENST00000487062 Q5VSD8 79 aa4.11□□□□□ -1.75
SF3A3-206ENST00000487062 SPAG11AQ6PDA7 123 aa4.11□□□□□ -1.75
SF3A3-206ENST00000487062 TRAV7A0A075B6U4 112 aa4.1□□□□□ -1.75
SF3A3-206ENST00000487062 SPINK1P00995 79 aa4.1□□□□□ -1.75
SF3A3-206ENST00000487062 Q5XG85 94 aa4.1□□□□□ -1.75
SF3A3-206ENST00000487062 PRR15Q8IV56 129 aa4.1□□□□□ -1.75
SF3A3-206ENST00000487062 PRR26Q8N8Z3 221 aa4.1□□□□□ -1.75
SF3A3-206ENST00000487062 Q96NJ1 140 aa4.1□□□□□ -1.75
SF3A3-206ENST00000487062 HCG22E2RYF7 251 aa4.09□□□□□ -1.75
SF3A3-206ENST00000487062 NDUFC1O43677 76 aa4.09□□□□□ -1.75
SF3A3-206ENST00000487062 ATP5EP56381 51 aaPredicted RBP4.09□□□□□ -1.75
SF3A3-206ENST00000487062 LINC00304Q8N9R0 145 aa4.09□□□□□ -1.75
SF3A3-206ENST00000487062 RPS29P62273 56 aaKnown RBP4.08□□□□□ -1.76
SF3A3-206ENST00000487062 VPS13BQ7Z7G8 4022 aa4.08□□□□□ -1.76
SF3A3-206ENST00000487062 KLKP1Q107X0 134 aa4.07□□□□□ -1.76
SF3A3-206ENST00000487062 SERP1Q9Y6X1 66 aa4.07□□□□□ -1.76
SF3A3-206ENST00000487062 RYR3Q15413 4870 aa4.06□□□□□ -1.76
SF3A3-206ENST00000487062 FAM236DA0A1B0GTK5 79 aa4.06□□□□□ -1.76
SF3A3-206ENST00000487062 A0A1B0GVX0 72 aa4.06□□□□□ -1.76
SF3A3-206ENST00000487062 FAM236CP0DP71 79 aa4.06□□□□□ -1.76
SF3A3-206ENST00000487062 CASC2Q6XLA1 102 aa4.06□□□□□ -1.76
SF3A3-206ENST00000487062 WFDC13Q8IUB5 93 aa4.06□□□□□ -1.76
SF3A3-206ENST00000487062 Q8N1X5 172 aa4.06□□□□□ -1.76
SF3A3-206ENST00000487062 IGHV6-1A0A0B4J1U7 121 aa4.05□□□□□ -1.76
SF3A3-206ENST00000487062 C1orf195Q5TG92 126 aa4.05□□□□□ -1.76
SF3A3-206ENST00000487062 PKHD1L1Q86WI1 4243 aa4.05□□□□□ -1.76
SF3A3-206ENST00000487062 MMP24-AS1A0A0U1RRL7 71 aa4.04□□□□□ -1.76
SF3A3-206ENST00000487062 C8orf87E5RJ46 101 aa4.04□□□□□ -1.76
SF3A3-206ENST00000487062 C20orf197Q8N268 126 aa4.04□□□□□ -1.76
SF3A3-206ENST00000487062 C8orf17Q9NRJ1 99 aa4.04□□□□□ -1.76
SF3A3-206ENST00000487062 hDV103S1A0JD37 113 aa4.03□□□□□ -1.76
SF3A3-206ENST00000487062 KRTAP29-1A8MX34 341 aaPredicted RBP4.03□□□□□ -1.76
SF3A3-206ENST00000487062 OCR1Q9BZK8 76 aa4.03□□□□□ -1.76
SF3A3-206ENST00000487062 H7BZZ5 65 aa4.02□□□□□ -1.77
SF3A3-206ENST00000487062 TMEM254Q8TBM7 123 aa4.02□□□□□ -1.77
SF3A3-206ENST00000487062 CYSTM1Q9H1C7 97 aa4.02□□□□□ -1.77
SF3A3-206ENST00000487062 FAT1Q14517 4588 aa4.02□□□□□ -1.77
SF3A3-206ENST00000487062 SMIM26A0A096LP01 95 aa4.01□□□□□ -1.77
SF3A3-206ENST00000487062 LINC00313P59037 77 aa4□□□□□ -1.77
SF3A3-206ENST00000487062 KRTAP10-8P60410 259 aa4□□□□□ -1.77
SF3A3-206ENST00000487062 MRPL34Q9BQ48 92 aaKnown RBP4□□□□□ -1.77
SF3A3-206ENST00000487062 TP53AIP1Q9HCN2 124 aa4□□□□□ -1.77
SF3A3-206ENST00000487062 HSPG2P98160 4391 aa3.99□□□□□ -1.77
SF3A3-206ENST00000487062 RYR1P21817 5038 aa3.98□□□□□ -1.77
SF3A3-206ENST00000487062 NDUFS5O43920 106 aa3.98□□□□□ -1.77
SF3A3-206ENST00000487062 OXTP01178 125 aa3.98□□□□□ -1.77
SF3A3-206ENST00000487062 MP68P56378 58 aa3.98□□□□□ -1.77
SF3A3-206ENST00000487062 H3BPC8 53 aa3.96□□□□□ -1.78
SF3A3-206ENST00000487062 NOTCH2NLQ7Z3S9 236 aa3.96□□□□□ -1.78
SF3A3-206ENST00000487062 TRAV22A0A0B4J277 110 aa3.95□□□□□ -1.78
SF3A3-206ENST00000487062 H0Y9P7 68 aa3.95□□□□□ -1.78
SF3A3-206ENST00000487062 C4orf26Q17RF5 130 aa3.95□□□□□ -1.78
SF3A3-206ENST00000487062 PRO0628Q9UI54 55 aa3.95□□□□□ -1.78
SF3A3-206ENST00000487062 A0A0U1RQV1 116 aa3.94□□□□□ -1.78
SF3A3-206ENST00000487062 SNURFQ9Y675 71 aa3.94□□□□□ -1.78
SF3A3-206ENST00000487062 FP248Q71RG6 208 aaPredicted RBP3.93□□□□□ -1.78
SF3A3-206ENST00000487062 Q8N9P0 234 aaPredicted RBP3.93□□□□□ -1.78
SF3A3-206ENST00000487062 KRTAP16-1A8MUX0 517 aa3.92□□□□□ -1.78
SF3A3-206ENST00000487062 MT1HL1P0DM35 61 aa3.92□□□□□ -1.78
SF3A3-206ENST00000487062 SEC61GP60059 68 aa3.92□□□□□ -1.78
SF3A3-206ENST00000487062 LINC00208Q96KT6 92 aa3.92□□□□□ -1.78
SF3A3-206ENST00000487062 RETNLBQ9BQ08 111 aa3.92□□□□□ -1.78
SF3A3-206ENST00000487062 KIAA1109Q2LD37 5005 aa3.92□□□□□ -1.78
SF3A3-206ENST00000487062 EPPK1P58107 5090 aaKnown RBP3.91□□□□□ -1.78
SF3A3-206ENST00000487062 C1orf64Q8NEQ6 169 aa3.91□□□□□ -1.78
SF3A3-206ENST00000487062 FLG2Q5D862 2391 aaPredicted RBP3.9□□□□□ -1.78
SF3A3-206ENST00000487062 ZCCHC13Q8WW36 166 aaKnown RBP3.9□□□□□ -1.79
SF3A3-206ENST00000487062 FAT3Q8TDW7 4589 aa3.9□□□□□ -1.79
SF3A3-206ENST00000487062 C9orf92A6NGG3 77 aa3.89□□□□□ -1.79
SF3A3-206ENST00000487062 LOC101927531A0A1B0GV80 90 aa3.88□□□□□ -1.79
SF3A3-206ENST00000487062 IGLV7-46A0A075B6I9 117 aa3.87□□□□□ -1.79
SF3A3-206ENST00000487062 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
SF3A3-206ENST00000487062 Q5W150 140 aa3.87□□□□□ -1.79
SF3A3-206ENST00000487062 V9GYY9 64 aa3.87□□□□□ -1.79
SF3A3-206ENST00000487062 LRP1Q07954 4544 aaKnown RBP3.87□□□□□ -1.79
SF3A3-206ENST00000487062 A8MUU9 505 aa3.86□□□□□ -1.79
SF3A3-206ENST00000487062 KRTAP13-3Q3SY46 172 aa3.86□□□□□ -1.79
SF3A3-206ENST00000487062 C20orf166-AS1Q96NR2 134 aa3.86□□□□□ -1.79
SF3A3-206ENST00000487062 CYP4F30PQ9H0H9 118 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms